RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 ZNF623O75123 536 aa12.37□□□□□ -0.43
TRAV3-201ENST00000390425 ZC3H11AO75152 810 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRAV3-201ENST00000390425 FDPSP14324 419 aaKnown RBP12.37□□□□□ -0.43
TRAV3-201ENST00000390425 GCFC2P16383 781 aaKnown RBP12.37□□□□□ -0.43
TRAV3-201ENST00000390425 DNM2P50570 870 aa12.37□□□□□ -0.43
TRAV3-201ENST00000390425 ZXDAP98168 799 aa12.37□□□□□ -0.43
TRAV3-201ENST00000390425 CDC42EP1Q00587 391 aa12.37□□□□□ -0.43
TRAV3-201ENST00000390425 NHLH1Q02575 133 aa12.37□□□□□ -0.43
TRAV3-201ENST00000390425 KRT17Q04695 432 aa12.37□□□□□ -0.43
TRAV3-201ENST00000390425 SMC1AQ14683 1233 aaKnown RBP12.37□□□□□ -0.43
TRAV3-201ENST00000390425 PIK3AP1Q6ZUJ8 805 aa12.37□□□□□ -0.43
TRAV3-201ENST00000390425 CATSPER4Q7RTX7 472 aa12.37□□□□□ -0.43
TRAV3-201ENST00000390425 TMC7Q7Z402 723 aa12.37□□□□□ -0.43
TRAV3-201ENST00000390425 BMP8AQ7Z5Y6 402 aa12.37□□□□□ -0.43
TRAV3-201ENST00000390425 MRPL43Q8N983 215 aaKnown RBP12.37□□□□□ -0.43
TRAV3-201ENST00000390425 FEZF2Q8TBJ5 459 aa12.37□□□□□ -0.43
TRAV3-201ENST00000390425 AUTS2Q8WXX7 1259 aa12.37□□□□□ -0.43
TRAV3-201ENST00000390425 TNFRSF25Q93038 417 aa12.37□□□□□ -0.43
TRAV3-201ENST00000390425 LXNQ9BS40 222 aa12.37□□□□□ -0.43
TRAV3-201ENST00000390425 SLKQ9H2G2 1235 aaPredicted RBP12.37□□□□□ -0.43
TRAV3-201ENST00000390425 NRDE2Q9H7Z3 1164 aa12.37□□□□□ -0.43
TRAV3-201ENST00000390425 BMP2KQ9NSY1 1161 aaPredicted RBP12.37□□□□□ -0.43
TRAV3-201ENST00000390425 AGPAT5Q9NUQ2 364 aa12.37□□□□□ -0.43
TRAV3-201ENST00000390425 COL4A3BPQ9Y5P4 624 aa12.37□□□□□ -0.43
TRAV3-201ENST00000390425 TMEM221A6NGB7 291 aa12.36□□□□□ -0.43
TRAV3-201ENST00000390425 M0R296 226 aa12.36□□□□□ -0.43
TRAV3-201ENST00000390425 ZBTB39O15060 712 aa12.36□□□□□ -0.43
TRAV3-201ENST00000390425 CDKL5O76039 1030 aa12.36□□□□□ -0.43
TRAV3-201ENST00000390425 LARGE1O95461 756 aa12.36□□□□□ -0.43
TRAV3-201ENST00000390425 P4HBP07237 508 aaKnown RBP12.36□□□□□ -0.43
TRAV3-201ENST00000390425 SRGAP2BP0DMP2 458 aa12.36□□□□□ -0.43
TRAV3-201ENST00000390425 HOXB8P17481 243 aaPredicted RBP12.36□□□□□ -0.43
TRAV3-201ENST00000390425 SP100P23497 879 aaPredicted RBP12.36□□□□□ -0.43
TRAV3-201ENST00000390425 AFF1P51825 1210 aaKnown RBP12.36□□□□□ -0.43
TRAV3-201ENST00000390425 NR5A1Q13285 461 aa12.36□□□□□ -0.43
TRAV3-201ENST00000390425 UBXN11Q5T124 520 aa12.36□□□□□ -0.43
TRAV3-201ENST00000390425 AGMOQ6ZNB7 445 aa12.36□□□□□ -0.43
TRAV3-201ENST00000390425 CASP10Q92851 521 aa12.36□□□□□ -0.43
TRAV3-201ENST00000390425 TMEM143Q96AN5 459 aa12.36□□□□□ -0.43
TRAV3-201ENST00000390425 TMEM169Q96HH4 297 aa12.36□□□□□ -0.43
TRAV3-201ENST00000390425 KCNH6Q9H252 994 aa12.36□□□□□ -0.43
TRAV3-201ENST00000390425 POMKQ9H5K3 350 aa12.36□□□□□ -0.43
TRAV3-201ENST00000390425 RGL1Q9NZL6 768 aa12.36□□□□□ -0.43
TRAV3-201ENST00000390425 DNAJB4Q9UDY4 337 aa12.36□□□□□ -0.43
TRAV3-201ENST00000390425 INPP5FQ9Y2H2 1132 aa12.36□□□□□ -0.43
TRAV3-201ENST00000390425 DOCK6Q96HP0 2047 aa12.36□□□□□ -0.43
TRAV3-201ENST00000390425 USP34Q70CQ2 3546 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 WNT7AO00755 349 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 TBX3O15119 743 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 CCNT1O60563 726 aaKnown RBP12.35□□□□□ -0.43
TRAV3-201ENST00000390425 OFD1O75665 1012 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 GALTP07902 379 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 HOXA11P31270 313 aaPredicted RBP12.35□□□□□ -0.43
TRAV3-201ENST00000390425 ALDH7A1P49419 539 aaKnown RBP12.35□□□□□ -0.43
TRAV3-201ENST00000390425 RAB27AP51159 221 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 AK2P54819 239 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 EMC2Q15006 297 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 EPHA7Q15375 998 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 NOMO2Q5JPE7 1267 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 GLB1LQ6UWU2 654 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 ZNF280BQ86YH2 543 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 C4orf19Q8IY42 314 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 VPS52Q8N1B4 723 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 PRSS33Q8NF86 280 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 PRPF31Q8WWY3 499 aaKnown RBP12.35□□□□□ -0.43
TRAV3-201ENST00000390425 ASIC4Q96FT7 647 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 IGSF21Q96ID5 467 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 DYDC2Q96IM9 177 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 CEP170P1Q96L14 293 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 MFSD14AQ96MC6 490 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 JPH2Q9BR39 696 aaPredicted RBP12.35□□□□□ -0.43
TRAV3-201ENST00000390425 INO80BQ9C086 356 aaPredicted RBP12.35□□□□□ -0.43
TRAV3-201ENST00000390425 XPNPEP1Q9NQW7 623 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 ORC3Q9UBD5 711 aaPredicted RBP12.35□□□□□ -0.43
TRAV3-201ENST00000390425 PCDHB2Q9Y5E7 798 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 IRAK3Q9Y616 596 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 TRIP11Q15643 1979 aa12.35□□□□□ -0.43
TRAV3-201ENST00000390425 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.34□□□□□ -0.43
TRAV3-201ENST00000390425 WEE2P0C1S8 567 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 CTSAP10619 480 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 SKIP12755 728 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 EPCAMP16422 314 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 YWHABP31946 246 aaKnown RBP12.34□□□□□ -0.43
TRAV3-201ENST00000390425 RFC5P40937 340 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 SLC11A1P49279 550 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 POLGP54098 1239 aaPredicted RBP12.34□□□□□ -0.43
TRAV3-201ENST00000390425 CYP4A11Q02928 519 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 SIGLEC14Q08ET2 396 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 LAMTOR4Q0VGL1 99 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 CTTNQ14247 550 aaKnown RBP12.34□□□□□ -0.43
TRAV3-201ENST00000390425 PTPN21Q16825 1174 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 IER5LQ5T953 404 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 NCAPH2Q6IBW4 605 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 KANK3Q6NY19 840 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 MRPL10Q7Z7H8 261 aaKnown RBP12.34□□□□□ -0.43
TRAV3-201ENST00000390425 DDX53Q86TM3 631 aaKnown RBP12.34□□□□□ -0.43
TRAV3-201ENST00000390425 ALYREFQ86V81 257 aaKnown RBP12.34□□□□□ -0.43
TRAV3-201ENST00000390425 NECAB1Q8N987 351 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 SLC22A17Q8WUG5 538 aa12.34□□□□□ -0.43
TRAV3-201ENST00000390425 PSPC1Q8WXF1 523 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms