RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 TRIM59Q8IWR1 403 aa15.27■□□□□ 0.03
RTF1-201ENST00000389629 ST13P4Q8IZP2 240 aaPredicted RBP15.27■□□□□ 0.03
RTF1-201ENST00000389629 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.27■□□□□ 0.03
RTF1-201ENST00000389629 TEKT4Q8WW24 435 aa15.27■□□□□ 0.03
RTF1-201ENST00000389629 DNAJC9Q8WXX5 260 aa15.27■□□□□ 0.03
RTF1-201ENST00000389629 CENPKQ9BS16 269 aa15.27■□□□□ 0.03
RTF1-201ENST00000389629 ERP44Q9BS26 406 aa15.27■□□□□ 0.03
RTF1-201ENST00000389629 CHORDC1Q9UHD1 332 aaPredicted RBP15.27■□□□□ 0.03
RTF1-201ENST00000389629 FAM208AQ9UK61 1670 aaKnown RBP15.27■□□□□ 0.03
RTF1-201ENST00000389629 SLC37A4O43826 429 aa15.27■□□□□ 0.03
RTF1-201ENST00000389629 ERVK-9P63128 1117 aa15.27■□□□□ 0.03
RTF1-201ENST00000389629 GJB7Q6PEY0 223 aa15.27■□□□□ 0.03
RTF1-201ENST00000389629 KIAA0825Q8IV33 1275 aa15.27■□□□□ 0.03
RTF1-201ENST00000389629 CEP70Q8NHQ1 597 aa15.27■□□□□ 0.03
RTF1-201ENST00000389629 FAM161BQ96MY7 647 aa15.27■□□□□ 0.03
RTF1-201ENST00000389629 SLC4A7Q9Y6M7 1214 aa15.27■□□□□ 0.03
RTF1-201ENST00000389629 HAUS5O94927 633 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 MXI1P50539 228 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 SH3BGRP55822 239 aaPredicted RBP15.26■□□□□ 0.03
RTF1-201ENST00000389629 ZNF844Q08AG5 666 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 PPP2R5DQ14738 602 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 NT5C1BQ96P26 610 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 PPARGC1AQ9UBK2 798 aaKnown RBP15.26■□□□□ 0.03
RTF1-201ENST00000389629 GOLGA8IPA6NC78 632 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 GOLGA8JA6NMD2 632 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 GOLGA8SH3BPF8 625 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 GOLGA8MH3BSY2 632 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 EPHB6O15197 1021 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 ITGA4P13612 1032 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 KLRK1P26718 216 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 SOX5P35711 763 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 NT5C2P49902 561 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 GPC5P78333 572 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 DHX34Q14147 1143 aaKnown RBP15.26■□□□□ 0.03
RTF1-201ENST00000389629 IRF2BP1Q8IU81 584 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 OGFOD1Q8N543 542 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 TRIM55Q9BYV6 548 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 C1orf112Q9NSG2 853 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 G3BP2Q9UN86 482 aaKnown RBP15.26■□□□□ 0.03
RTF1-201ENST00000389629 CPP00450 1065 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 POLR2MP0CAP2 368 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 GCLMP48507 274 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 BBS9Q3SYG4 887 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 TMCO4Q5TGY1 634 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 VGLL2Q8N8G2 317 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 SYN2Q92777 582 aaPredicted RBP15.26■□□□□ 0.03
RTF1-201ENST00000389629 C9orf72Q96LT7 481 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 KDM4CQ9H3R0 1056 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 NAGPAQ9UK23 515 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 PPFIA2O75334 1257 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 IRX4P78413 519 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 MEI1Q5TIA1 1274 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 LRP10Q7Z4F1 713 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 FERMT1Q9BQL6 677 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 TEKT3Q9BXF9 490 aa15.26■□□□□ 0.03
RTF1-201ENST00000389629 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.26■□□□□ 0.03
RTF1-201ENST00000389629 KYNUQ16719 465 aa15.25■□□□□ 0.03
RTF1-201ENST00000389629 CLEC4GQ6UXB4 293 aa15.25■□□□□ 0.03
RTF1-201ENST00000389629 GDF11O95390 407 aa15.25■□□□□ 0.03
RTF1-201ENST00000389629 RASA1P20936 1047 aa15.25■□□□□ 0.03
RTF1-201ENST00000389629 TARSP26639 723 aaKnown RBP15.25■□□□□ 0.03
RTF1-201ENST00000389629 ARHGAP4P98171 946 aa15.25■□□□□ 0.03
RTF1-201ENST00000389629 TPCN2Q8NHX9 752 aa15.25■□□□□ 0.03
RTF1-201ENST00000389629 SMYD3Q9H7B4 428 aa15.25■□□□□ 0.03
RTF1-201ENST00000389629 XRN1Q8IZH2 1706 aaKnown RBP15.25■□□□□ 0.03
RTF1-201ENST00000389629 KCNA3P22001 575 aa15.25■□□□□ 0.03
RTF1-201ENST00000389629 XKR9Q5GH70 373 aa15.25■□□□□ 0.03
RTF1-201ENST00000389629 PRCCQ92733 491 aaPredicted RBP15.25■□□□□ 0.03
RTF1-201ENST00000389629 ZNF577Q9BSK1 485 aa15.25■□□□□ 0.03
RTF1-201ENST00000389629 FAM129AQ9BZQ8 928 aa15.25■□□□□ 0.03
RTF1-201ENST00000389629 INTS2Q9H0H0 1204 aaKnown RBP15.25■□□□□ 0.03
RTF1-201ENST00000389629 ANAPC7Q9UJX3 599 aa15.25■□□□□ 0.03
RTF1-201ENST00000389629 GNAT1P11488 350 aa15.25■□□□□ 0.03
RTF1-201ENST00000389629 RFC1P35251 1148 aaPredicted RBP15.25■□□□□ 0.03
RTF1-201ENST00000389629 TBC1D9BQ66K14 1250 aa15.25■□□□□ 0.03
RTF1-201ENST00000389629 SMC1BQ8NDV3 1235 aa15.25■□□□□ 0.03
RTF1-201ENST00000389629 NACC1Q96RE7 527 aa15.25■□□□□ 0.03
RTF1-201ENST00000389629 C15orf41Q9Y2V0 281 aa15.25■□□□□ 0.03
RTF1-201ENST00000389629 NVLO15381 856 aaKnown RBP15.24■□□□□ 0.03
RTF1-201ENST00000389629 TRAPPC3O43617 180 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 SERPINB4P48594 390 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 CUL3Q13618 768 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 TRADDQ15628 312 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 LRRC36Q1X8D7 754 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 C3orf20Q8ND61 904 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 IWS1Q96ST2 819 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 ELF3P78545 371 aaPredicted RBP15.24■□□□□ 0.03
RTF1-201ENST00000389629 RASA3Q14644 834 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 DAGLBQ8NCG7 672 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 FBXO25Q8TCJ0 367 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 MTRQ99707 1265 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 PABPC3Q9H361 631 aaKnown RBP15.24■□□□□ 0.03
RTF1-201ENST00000389629 IFT122Q9HBG6 1241 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 MYBP10242 640 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 AKR1B1P15121 316 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 NMT1P30419 496 aaKnown RBP15.24■□□□□ 0.03
RTF1-201ENST00000389629 KRT17Q04695 432 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 DYNC1I2Q13409 638 aaKnown RBP15.24■□□□□ 0.03
RTF1-201ENST00000389629 C4orf33Q8N1A6 199 aa15.24■□□□□ 0.03
RTF1-201ENST00000389629 CCDC17Q96LX7 622 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms