RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 FDX1P10109 184 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 SFNP31947 248 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 CYLC1P35663 651 aaPredicted RBP11.08□□□□□ -0.64
LTN1-203ENST00000389195 MATR3P43243 847 aaKnown RBP eCLIP11.08□□□□□ -0.645e-9■■□□□ 14.3
LTN1-203ENST00000389195 MARSP56192 900 aaKnown RBP11.08□□□□□ -0.64
LTN1-203ENST00000389195 KCTD2Q14681 263 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 PHLDB2Q86SQ0 1253 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 RETREG2Q8NC44 543 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 SEMA4DQ92854 862 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 RNF19AQ9NV58 838 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 MAP3K20Q9NYL2 800 aaKnown RBP11.08□□□□□ -0.64
LTN1-203ENST00000389195 TAS2R14Q9NYV8 317 aa11.08□□□□□ -0.64
LTN1-203ENST00000389195 A0A1W2PQJ5 194 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 FOXN3O00409 490 aaPredicted RBP11.07□□□□□ -0.64
LTN1-203ENST00000389195 EIF3DO15371 548 aaKnown RBP eCLIP11.07□□□□□ -0.64
LTN1-203ENST00000389195 IPO7O95373 1038 aaKnown RBP11.07□□□□□ -0.64
LTN1-203ENST00000389195 FTCDO95954 541 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 KLRC1P26715 233 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 CDR1P51861 262 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 BFSP1Q12934 665 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 PPIL2Q13356 520 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 EMC2Q15006 297 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 PPP4R3CPQ6ZMV5 832 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 GBP6Q6ZN66 633 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 ZBTB33Q86T24 672 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 PDCL2Q8N4E4 241 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 COG1Q8WTW3 980 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 DHX38Q92620 1227 aaKnown RBP11.07□□□□□ -0.64
LTN1-203ENST00000389195 ATP6V0A1Q93050 837 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 MS4A14Q96JA4 679 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 MS4A4AQ96JQ5 239 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 TARS2Q9BW92 718 aaKnown RBP11.07□□□□□ -0.64
LTN1-203ENST00000389195 RNPEPQ9H4A4 650 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 UBE2TQ9NPD8 197 aaPredicted RBP11.07□□□□□ -0.64
LTN1-203ENST00000389195 DMAC2Q9NW81 257 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 DNAJC12Q9UKB3 198 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 EIF3CLB5ME19 914 aaKnown RBP11.07□□□□□ -0.64
LTN1-203ENST00000389195 PDE2AO00408 941 aaPredicted RBP11.07□□□□□ -0.64
LTN1-203ENST00000389195 TXNP10599 105 aaKnown RBP11.07□□□□□ -0.64
LTN1-203ENST00000389195 ABCB4P21439 1286 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 STAT5BP51692 787 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 KIF5AQ12840 1032 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 HSP90AA2PQ14568 343 aaPredicted RBP11.07□□□□□ -0.64
LTN1-203ENST00000389195 DRAP1Q14919 205 aaPredicted RBP11.07□□□□□ -0.64
LTN1-203ENST00000389195 SNRNP35Q16560 246 aaKnown RBP11.07□□□□□ -0.64
LTN1-203ENST00000389195 ASTE1Q2TB18 679 aaPredicted RBP11.07□□□□□ -0.64
LTN1-203ENST00000389195 C2CD6Q53TS8 623 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 TAF3Q5VWG9 929 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 CST9Q5W186 159 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 MIS18BP1Q6P0N0 1132 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 NFRKBQ6P4R8 1299 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 GLYCTKQ8IVS8 523 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 METTL13Q8N6R0 699 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 SLC20A1Q8WUM9 679 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 FAM212AQ96EL1 285 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 GDAP1L1Q96MZ0 367 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 SPATA33Q96N06 139 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 ACCSQ96QU6 501 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 EIF3CQ99613 913 aaKnown RBP11.07□□□□□ -0.64
LTN1-203ENST00000389195 CPA4Q9UI42 421 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 KCNH4Q9UQ05 1017 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 STK24Q9Y6E0 443 aa11.07□□□□□ -0.64
LTN1-203ENST00000389195 KIF2AO00139 706 aaPredicted RBP11.06□□□□□ -0.64
LTN1-203ENST00000389195 CXCL11O14625 94 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 ZNF286BP0CG31 522 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 GLRA2P23416 452 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 ADCYAP1R1P41586 468 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 VAMP7P51809 220 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 GTF2BQ00403 316 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 ASIC2Q16515 512 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 KIAA0753Q2KHM9 967 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 SLC9C1Q4G0N8 1177 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 FIGNQ5HY92 759 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 LDLRAD1Q5T700 205 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 SPOPLQ6IQ16 392 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 OTUD6AQ7L8S5 288 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 UBXN4Q92575 508 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 MMS19Q96T76 1030 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 PLCB1Q9NQ66 1216 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 DDX41Q9UJV9 622 aaKnown RBP11.06□□□□□ -0.64
LTN1-203ENST00000389195 ZNFX1Q9P2E3 1918 aaKnown RBP11.06□□□□□ -0.64
LTN1-203ENST00000389195 NOP56O00567 594 aaKnown RBP11.06□□□□□ -0.64
LTN1-203ENST00000389195 EVI5O60447 810 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 OATP04181 439 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 ADORA2AP29274 412 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 NLRP11P59045 1033 aaKnown RBP11.06□□□□□ -0.64
LTN1-203ENST00000389195 CBX1P83916 185 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 MYL7Q01449 175 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 MKRN4PQ13434 485 aaPredicted RBP11.06□□□□□ -0.64
LTN1-203ENST00000389195 SNAPC2Q13487 334 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 LLGL1Q15334 1064 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 XXYLT1Q8NBI6 393 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 NEK9Q8TD19 979 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 PRPF31Q8WWY3 499 aaKnown RBP11.06□□□□□ -0.64
LTN1-203ENST00000389195 ANKRD7Q92527 254 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 ERO1AQ96HE7 468 aa11.06□□□□□ -0.64
LTN1-203ENST00000389195 NAPGQ99747 312 aaPredicted RBP11.06□□□□□ -0.64
LTN1-203ENST00000389195 GTPBP4Q9BZE4 634 aaKnown RBP11.06□□□□□ -0.64
LTN1-203ENST00000389195 INTS2Q9H0H0 1204 aaKnown RBP11.06□□□□□ -0.64
LTN1-203ENST00000389195 FBXO40Q9UH90 709 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms