RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 MAGEB5Q9BZ81 275 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 RRP15Q9Y3B9 282 aaKnown RBP13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 MYO7AQ13402 2215 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 ZNF335Q9H4Z2 1342 aaPredicted RBP13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 SLC7A5Q01650 507 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 SCN4BQ8IWT1 228 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 SPATA33Q96N06 139 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 ACAD9Q9H845 621 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 GINM1Q9NU53 330 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 KDM6AO15550 1401 aaPredicted RBP13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 TMPRSS15P98073 1019 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 NSUN2Q08J23 767 aaKnown RBP eCLIP13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 SPARCL1Q14515 664 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 MB21D1Q8N884 522 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 ALKBH8Q96BT7 664 aaKnown RBP13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 ZNF212Q9UDV6 495 aa13.13□□□□□ -0.31
KCNQ3-201ENST00000388996 NEXMIFQ5QGS0 1516 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 SLC16A4O15374 487 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 CYP27B1O15528 508 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 SDC4P31431 198 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 CEP95Q96GE4 821 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 DIP2AQ14689 1571 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 USP17L10C9JJH3 530 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 C21orf2O43822 256 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 LRRC31Q6UY01 552 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 CRB1P82279 1406 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 RPS6KA4O75676 772 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 SNX19Q92543 992 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 RMDN2Q96LZ7 410 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 KRT7P08729 469 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 GLE1Q53GS7 698 aaKnown RBP13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 TRPA1O75762 1119 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 MFSD14CQ5VZR4 134 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 ITPRIPL1Q6GPH6 555 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 FASTKD5Q7L8L6 764 aaKnown RBP13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 TEX12Q9BXU0 123 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 DCP1AQ9NPI6 582 aaPredicted RBP13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 AKAP6Q13023 2319 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 CCDC188H7C350 402 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 HABP4Q5JVS0 413 aaKnown RBP13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 EDEM3Q9BZQ6 932 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 SP110Q9HB58 689 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 H7C1W4 665 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 KRT80Q6KB66 452 aa13.12□□□□□ -0.31
KCNQ3-201ENST00000388996 FRMD3A2A2Y4 597 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 ACAD11Q709F0 780 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 TTC8Q8TAM2 541 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 CCDC138Q96M89 665 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 C2orf40Q9H1Z8 148 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 ABHD10Q9NUJ1 306 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 CNOT8Q9UFF9 292 aaKnown RBP13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 ADAMTS1Q9UHI8 967 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 PCDHA6Q9UN73 950 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 PCDHA8Q9Y5H6 950 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 COPEO14579 308 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 TOB2Q14106 344 aaPredicted RBP13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 RCSD1Q6JBY9 416 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 PPARGC1AQ9UBK2 798 aaKnown RBP13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 TEKT2Q9UIF3 430 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 TRIM33Q9UPN9 1127 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 CLCN6P51797 869 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 G3BP2Q9UN86 482 aaKnown RBP13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 HEY1Q9Y5J3 304 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 ERCC6L2Q5T890 1561 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 A0A0G2JND7 137 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 SNRNP200O75643 2136 aaKnown RBP13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 KYAT1Q16773 422 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 TTC30AQ86WT1 665 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 SEL1LQ9UBV2 794 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 MAPK13O15264 365 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 MXD4Q14582 209 aaPredicted RBP13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 ALX1Q15699 326 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 RHPN2Q8IUC4 686 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 MRPL4Q9BYD3 311 aaKnown RBP13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 MINPP1Q9UNW1 487 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 TRIM62Q9BVG3 475 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 BRINP3Q76B58 766 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 GAS2L3Q86XJ1 694 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 TTC13Q8NBP0 860 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 SLC44A5Q8NCS7 719 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 EXOC4Q96A65 974 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 DNAJC17Q9NVM6 304 aaKnown RBP13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 LRRC53A6NM62 1247 aa13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 PSMC1P62191 440 aaKnown RBP13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 ZNF564Q8TBZ8 553 aaPredicted RBP13.11□□□□□ -0.31
KCNQ3-201ENST00000388996 LARGE1O95461 756 aa13.1□□□□□ -0.31
KCNQ3-201ENST00000388996 GPS1Q13098 491 aa13.1□□□□□ -0.31
KCNQ3-201ENST00000388996 TRIM72Q6ZMU5 477 aa13.1□□□□□ -0.31
KCNQ3-201ENST00000388996 CENPKQ9BS16 269 aa13.1□□□□□ -0.31
KCNQ3-201ENST00000388996 NEMP1O14524 444 aa13.1□□□□□ -0.31
KCNQ3-201ENST00000388996 FCER1AP12319 257 aa13.1□□□□□ -0.31
KCNQ3-201ENST00000388996 SKIP12755 728 aa13.1□□□□□ -0.31
KCNQ3-201ENST00000388996 SLC10A5Q5PT55 438 aa13.1□□□□□ -0.31
KCNQ3-201ENST00000388996 RASIP1Q5U651 963 aa13.1□□□□□ -0.31
KCNQ3-201ENST00000388996 SPATA31A3Q5VYP0 1347 aa13.1□□□□□ -0.31
KCNQ3-201ENST00000388996 GOLGA8MH3BSY2 632 aa13.1□□□□□ -0.31
KCNQ3-201ENST00000388996 QARSP47897 775 aaKnown RBP13.1□□□□□ -0.31
KCNQ3-201ENST00000388996 KNOP1Q1ED39 458 aaKnown RBP13.1□□□□□ -0.31
KCNQ3-201ENST00000388996 EPHA10Q5JZY3 1008 aa13.1□□□□□ -0.31
KCNQ3-201ENST00000388996 IFT43Q96FT9 208 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms