RNA–Protein interactions for RNA: ENST00000387416.2

MT-TS1-201, Transcript of mitochondrially encoded tRNA serine 1 (UCN), humanhuman

BASIC

Gene MT-TS1, Length 69 nt, Biotype Mt tRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT-TS1-201ENST00000387416 PIN4Q9Y237 131 aaKnown RBP9.44□□□□□ -0.9
MT-TS1-201ENST00000387416 MRPL42Q9Y6G3 142 aaKnown RBP9.44□□□□□ -0.9
MT-TS1-201ENST00000387416 CNTNAP2Q9UHC6 1331 aa9.44□□□□□ -0.9
MT-TS1-201ENST00000387416 PHLPP2Q6ZVD8 1323 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 USO1O60763 962 aaKnown RBP9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 EYA4O95677 639 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 LINC00271P0C7V0 271 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 EFNA5P52803 228 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 TJAP1Q5JTD0 557 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 SPOUT1Q5T280 376 aaKnown RBP9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 FAM102BQ5T8I3 360 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 NOTUMQ6P988 496 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 GLB1LQ6UWU2 654 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 MRPL10Q7Z7H8 261 aaKnown RBP9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 ZBTB8OSQ8IWT0 167 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 HACE1Q8IYU2 909 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 LRRC43Q8N309 656 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 SNX29Q8TEQ0 813 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 ZNF668Q96K58 619 aaPredicted RBP9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 IFT74Q96LB3 600 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 PRIMPOLQ96LW4 560 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 POLR3FQ9H1D9 316 aaPredicted RBP9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 ZSCAN16Q9H4T2 348 aaPredicted RBP9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 NSUN3Q9H649 340 aaKnown RBP9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 FAM105AQ9NUU6 356 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 TYW1Q9NV66 732 aaKnown RBP9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 STK39Q9UEW8 545 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 PUF60Q9UHX1 559 aaKnown RBP9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 PLAGL2Q9UPG8 496 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 KIAA1024Q9UPX6 916 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 LZTS1Q9Y250 596 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 PRUNE2Q8WUY3 3088 aa9.43□□□□□ -0.9
MT-TS1-201ENST00000387416 FNDC1Q4ZHG4 1894 aaPredicted RBP9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 ARID2Q68CP9 1835 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 CDH23Q9H251 3354 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 VPS37CA5D8V6 355 aaPredicted RBP9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 INO80B-WBP1J3KQ70 363 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 CSDE1O75534 798 aaKnown RBP9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 SYT1P21579 422 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 FGFR4P22455 802 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 GLRA2P23416 452 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 HOXA11P31270 313 aaPredicted RBP9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 LONP1P36776 959 aaKnown RBP9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 KRT17Q04695 432 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 CAPSQ13938 189 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 NBR1Q14596 966 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 BMS1Q14692 1282 aaKnown RBP9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 FAM187BQ17R55 369 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 PUS10Q3MIT2 529 aaKnown RBP9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 PAN2Q504Q3 1202 aaKnown RBP9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 HYIQ5T013 277 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 POTEGQ6S5H5 508 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 APBB1IPQ7Z5R6 666 aaPredicted RBP9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 SPRED2Q7Z698 418 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 KLHL23Q8NBE8 558 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 RNF169Q8NCN4 708 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 SPPL3Q8TCT6 385 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 CDK5RAP3Q96JB5 506 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 ZNF558Q96NG5 402 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 CASD1Q96PB1 797 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 ASB2Q96Q27 587 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 BHMT2Q9H2M3 363 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 MINDY3Q9H8M7 445 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 C17orf75Q9HAS0 396 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 DDX19AQ9NUU7 478 aaKnown RBP9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 PRMT7Q9NVM4 692 aaPredicted RBP9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 KCND2Q9NZV8 630 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 PCDHB2Q9Y5E7 798 aa9.42□□□□□ -0.9
MT-TS1-201ENST00000387416 ZMYM2Q9UBW7 1377 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 VWA3AA6NCI4 1184 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 LRRIQ4A6NIV6 560 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 GRM6O15303 877 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 ITGB1P05556 798 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 FGFR1P11362 822 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 NCLP19338 710 aaKnown RBP9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 IBSPP21815 317 aaPredicted RBP9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 SCP2P22307 547 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 UBA7P41226 1012 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 NAMPTP43490 491 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 ALDH7A1P49419 539 aaKnown RBP9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 PLCB3Q01970 1234 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 MBTD1Q05BQ5 628 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 NOMO2Q5JPE7 1267 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 CDCA2Q69YH5 1023 aaPredicted RBP9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 KCNT2Q6UVM3 1135 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 PPP4R3CPQ6ZMV5 832 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 HSCBQ8IWL3 235 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 THNSL1Q8IYQ7 743 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 COLGALT1Q8NBJ5 622 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 DEPTORQ8TB45 409 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 URGCPQ8TCY9 931 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 ASAP3Q8TDY4 903 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 CALML4Q96GE6 196 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 DRC1Q96MC2 740 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 CSRNP2Q9H175 543 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 CWH43Q9H720 699 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 BMP2KQ9NSY1 1161 aaPredicted RBP9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 RNF19AQ9NV58 838 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 SPG21Q9NZD8 308 aa9.41□□□□□ -0.9
MT-TS1-201ENST00000387416 FAM50BQ9Y247 325 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms