RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 C2orf71A6NGG8 1288 aa29.56■■■□□ 2.32
NPHP3-202ENST00000383282 BMP8AQ7Z5Y6 402 aa29.56■■■□□ 2.32
NPHP3-202ENST00000383282 KSR1Q8IVT5 923 aa29.56■■■□□ 2.32
NPHP3-202ENST00000383282 WASF1Q92558 559 aa29.56■■■□□ 2.32
NPHP3-202ENST00000383282 LPPQ93052 612 aa29.56■■■□□ 2.32
NPHP3-202ENST00000383282 PGBD4Q96DM1 585 aa29.56■■■□□ 2.32
NPHP3-202ENST00000383282 FBXL18Q96ME1 805 aa29.56■■■□□ 2.32
NPHP3-202ENST00000383282 HCFC2Q9Y5Z7 792 aa29.56■■■□□ 2.32
NPHP3-202ENST00000383282 TMEM221A6NGB7 291 aa29.55■■■□□ 2.32
NPHP3-202ENST00000383282 M0R296 226 aa29.55■■■□□ 2.32
NPHP3-202ENST00000383282 PFKFB2O60825 505 aa29.55■■■□□ 2.32
NPHP3-202ENST00000383282 RFC5P40937 340 aa29.55■■■□□ 2.32
NPHP3-202ENST00000383282 NPEPPSP55786 919 aa29.55■■■□□ 2.32
NPHP3-202ENST00000383282 LONRF3Q496Y0 759 aa29.55■■■□□ 2.32
NPHP3-202ENST00000383282 NOMO2Q5JPE7 1267 aa29.55■■■□□ 2.32
NPHP3-202ENST00000383282 PSPC1Q8WXF1 523 aaKnown RBP29.55■■■□□ 2.32
NPHP3-202ENST00000383282 TPCN1Q9ULQ1 816 aa29.55■■■□□ 2.32
NPHP3-202ENST00000383282 INPP5FQ9Y2H2 1132 aa29.55■■■□□ 2.32
NPHP3-202ENST00000383282 ZNF623O75123 536 aa29.54■■■□□ 2.32
NPHP3-202ENST00000383282 CXCL14O95715 111 aa29.54■■■□□ 2.32
NPHP3-202ENST00000383282 RNASELQ05823 741 aaKnown RBP29.54■■■□□ 2.32
NPHP3-202ENST00000383282 ANKRD1Q15327 319 aa29.54■■■□□ 2.32
NPHP3-202ENST00000383282 EPHA7Q15375 998 aa29.54■■■□□ 2.32
NPHP3-202ENST00000383282 CES5AQ6NT32 575 aa29.54■■■□□ 2.32
NPHP3-202ENST00000383282 OTUD6AQ7L8S5 288 aa29.54■■■□□ 2.32
NPHP3-202ENST00000383282 C4orf19Q8IY42 314 aa29.54■■■□□ 2.32
NPHP3-202ENST00000383282 VPS52Q8N1B4 723 aa29.54■■■□□ 2.32
NPHP3-202ENST00000383282 PBXIP1Q96AQ6 731 aa29.54■■■□□ 2.32
NPHP3-202ENST00000383282 IFT122Q9HBG6 1241 aa29.54■■■□□ 2.32
NPHP3-202ENST00000383282 BAG4O95429 457 aaKnown RBP29.53■■■□□ 2.32
NPHP3-202ENST00000383282 ITIH3Q06033 890 aa29.53■■■□□ 2.32
NPHP3-202ENST00000383282 GIT2Q14161 759 aa29.53■■■□□ 2.32
NPHP3-202ENST00000383282 SRGAP1Q7Z6B7 1085 aa29.53■■■□□ 2.32
NPHP3-202ENST00000383282 LXNQ9BS40 222 aa29.53■■■□□ 2.32
NPHP3-202ENST00000383282 DHX33Q9H6R0 707 aaKnown RBP29.53■■■□□ 2.32
NPHP3-202ENST00000383282 BRMS1Q9HCU9 246 aa29.53■■■□□ 2.32
NPHP3-202ENST00000383282 AGPAT5Q9NUQ2 364 aa29.53■■■□□ 2.32
NPHP3-202ENST00000383282 TBC1D13Q9NVG8 400 aa29.53■■■□□ 2.32
NPHP3-202ENST00000383282 ORC3Q9UBD5 711 aaPredicted RBP29.53■■■□□ 2.32
NPHP3-202ENST00000383282 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP29.52■■■□□ 2.32
NPHP3-202ENST00000383282 GAS2O43903 313 aaKnown RBP29.52■■■□□ 2.32
NPHP3-202ENST00000383282 CLASP2O75122 1294 aaKnown RBP29.52■■■□□ 2.32
NPHP3-202ENST00000383282 YWHABP31946 246 aaKnown RBP29.52■■■□□ 2.32
NPHP3-202ENST00000383282 NCAPH2Q6IBW4 605 aa29.52■■■□□ 2.32
NPHP3-202ENST00000383282 SUGP1Q8IWZ8 645 aaKnown RBP29.52■■■□□ 2.32
NPHP3-202ENST00000383282 SLFN12Q8IYM2 578 aa29.52■■■□□ 2.32
NPHP3-202ENST00000383282 URGCPQ8TCY9 931 aa29.52■■■□□ 2.32
NPHP3-202ENST00000383282 OXER1Q8TDS5 423 aa29.52■■■□□ 2.32
NPHP3-202ENST00000383282 TCP11Q8WWU5 503 aa29.52■■■□□ 2.32
NPHP3-202ENST00000383282 HAS1Q92839 578 aa29.52■■■□□ 2.32
NPHP3-202ENST00000383282 TMEM143Q96AN5 459 aa29.52■■■□□ 2.32
NPHP3-202ENST00000383282 NECTIN4Q96NY8 510 aa29.52■■■□□ 2.32
NPHP3-202ENST00000383282 ZBP1Q9H171 429 aa29.52■■■□□ 2.32
NPHP3-202ENST00000383282 NRDE2Q9H7Z3 1164 aa29.52■■■□□ 2.32
NPHP3-202ENST00000383282 NR2E1Q9Y466 385 aa29.52■■■□□ 2.32
NPHP3-202ENST00000383282 OFD1O75665 1012 aa29.51■■■□□ 2.31
NPHP3-202ENST00000383282 SRGAP2CP0DJJ0 459 aa29.51■■■□□ 2.31
NPHP3-202ENST00000383282 SIGLEC14Q08ET2 396 aa29.51■■■□□ 2.31
NPHP3-202ENST00000383282 ZBTB33Q86T24 672 aa29.51■■■□□ 2.31
NPHP3-202ENST00000383282 DDX53Q86TM3 631 aaKnown RBP29.51■■■□□ 2.31
NPHP3-202ENST00000383282 ALYREFQ86V81 257 aaKnown RBP29.51■■■□□ 2.31
NPHP3-202ENST00000383282 POTEDQ86YR6 584 aa29.51■■■□□ 2.31
NPHP3-202ENST00000383282 PRPF31Q8WWY3 499 aaKnown RBP29.51■■■□□ 2.31
NPHP3-202ENST00000383282 IGSF21Q96ID5 467 aa29.51■■■□□ 2.31
NPHP3-202ENST00000383282 GBP3Q9H0R5 595 aa29.51■■■□□ 2.31
NPHP3-202ENST00000383282 ADAM7Q9H2U9 754 aa29.51■■■□□ 2.31
NPHP3-202ENST00000383282 ZSWIM4Q9H7M6 989 aa29.51■■■□□ 2.31
NPHP3-202ENST00000383282 GJB4Q9NTQ9 266 aa29.51■■■□□ 2.31
NPHP3-202ENST00000383282 WRAP73Q9P2S5 460 aaPredicted RBP29.51■■■□□ 2.31
NPHP3-202ENST00000383282 PCDHB2Q9Y5E7 798 aa29.51■■■□□ 2.31
NPHP3-202ENST00000383282 TECTAO75443 2155 aa29.51■■■□□ 2.31
NPHP3-202ENST00000383282 ASAP2O43150 1006 aa29.5■■■□□ 2.31
NPHP3-202ENST00000383282 GALTP07902 379 aa29.5■■■□□ 2.31
NPHP3-202ENST00000383282 KRT2P35908 639 aa29.5■■■□□ 2.31
NPHP3-202ENST00000383282 ANAPC15P60006 121 aa29.5■■■□□ 2.31
NPHP3-202ENST00000383282 NHLH1Q02575 133 aa29.5■■■□□ 2.31
NPHP3-202ENST00000383282 ZNF579Q8NAF0 562 aaKnown RBP29.5■■■□□ 2.31
NPHP3-202ENST00000383282 BMP2KQ9NSY1 1161 aaPredicted RBP29.5■■■□□ 2.31
NPHP3-202ENST00000383282 MEIS3P2A8K0S8 358 aa29.49■■■□□ 2.31
NPHP3-202ENST00000383282 CTSAP10619 480 aa29.49■■■□□ 2.31
NPHP3-202ENST00000383282 LAMTOR4Q0VGL1 99 aa29.49■■■□□ 2.31
NPHP3-202ENST00000383282 EMC2Q15006 297 aa29.49■■■□□ 2.31
NPHP3-202ENST00000383282 PTPN21Q16825 1174 aa29.49■■■□□ 2.31
NPHP3-202ENST00000383282 XKR9Q5GH70 373 aa29.49■■■□□ 2.31
NPHP3-202ENST00000383282 TMEM173Q86WV6 379 aaPredicted RBP29.49■■■□□ 2.31
NPHP3-202ENST00000383282 DYDC2Q96IM9 177 aa29.49■■■□□ 2.31
NPHP3-202ENST00000383282 TSHZ2Q9NRE2 1034 aa29.49■■■□□ 2.31
NPHP3-202ENST00000383282 DZANK1Q9NVP4 752 aa29.49■■■□□ 2.31
NPHP3-202ENST00000383282 RGL1Q9NZL6 768 aa29.49■■■□□ 2.31
NPHP3-202ENST00000383282 STK39Q9UEW8 545 aa29.49■■■□□ 2.31
NPHP3-202ENST00000383282 IRAK3Q9Y616 596 aa29.49■■■□□ 2.31
NPHP3-202ENST00000383282 SP100P23497 879 aaPredicted RBP29.48■■■□□ 2.31
NPHP3-202ENST00000383282 RNF149Q8NC42 400 aa29.48■■■□□ 2.31
NPHP3-202ENST00000383282 RIPOR3Q96MK2 946 aa29.48■■■□□ 2.31
NPHP3-202ENST00000383282 FAM193BQ96PV7 902 aaPredicted RBP29.48■■■□□ 2.31
NPHP3-202ENST00000383282 MTRQ99707 1265 aa29.48■■■□□ 2.31
NPHP3-202ENST00000383282 RSAD1Q9HA92 442 aa29.48■■■□□ 2.31
NPHP3-202ENST00000383282 KANSL3Q9P2N6 904 aa29.48■■■□□ 2.31
NPHP3-202ENST00000383282 CNTNAP2Q9UHC6 1331 aa29.47■■■□□ 2.31
NPHP3-202ENST00000383282 CTDNEP1O95476 244 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms