RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 VPS36Q86VN1 386 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 AGGF1Q8N302 714 aaeCLIP16.12■□□□□ 0.17
CTNS-202ENST00000381870 RBM41Q96IZ5 413 aaKnown RBP16.12■□□□□ 0.17
CTNS-202ENST00000381870 TBC1D10AQ9BXI6 508 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 PTPN22Q9Y2R2 807 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 PHF2O75151 1096 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 BRAFP15056 766 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 RASA1P20936 1047 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 FXR2P51116 673 aaKnown RBP eCLIP16.12■□□□□ 0.17
CTNS-202ENST00000381870 USP4Q13107 963 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 TMEM119Q4V9L6 283 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 GLYCTKQ8IVS8 523 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 OLIG1Q8TAK6 271 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 GJA10Q969M2 543 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 ARHGEF26Q96DR7 871 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 ROPN1BQ9BZX4 212 aaPredicted RBP16.12■□□□□ 0.17
CTNS-202ENST00000381870 CDC42EP4Q9H3Q1 356 aaKnown RBP16.12■□□□□ 0.17
CTNS-202ENST00000381870 DENND2DQ9H6A0 471 aaPredicted RBP16.12■□□□□ 0.17
CTNS-202ENST00000381870 ROPN1Q9HAT0 212 aaPredicted RBP16.12■□□□□ 0.17
CTNS-202ENST00000381870 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.12■□□□□ 0.17
CTNS-202ENST00000381870 NMRK1Q9NWW6 199 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 ASAP1Q9ULH1 1129 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 PCDHA2Q9Y5H9 948 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 COL18A1P39060 1754 aa16.12■□□□□ 0.17
CTNS-202ENST00000381870 BAG3O95817 575 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 NR2F2P24468 414 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 FOXN2P32314 431 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 CHRNDQ07001 517 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 KRT79Q5XKE5 535 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 ZNF449Q6P9G9 518 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 RBBP8NLQ8NC74 664 aaPredicted RBP16.11■□□□□ 0.17
CTNS-202ENST00000381870 FGD4Q96M96 766 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 TMX4Q9H1E5 349 aaPredicted RBP16.11■□□□□ 0.17
CTNS-202ENST00000381870 VCXQ9H320 206 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 INTUQ9ULD6 942 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 CHKBQ9Y259 395 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 DIS3Q9Y2L1 958 aaKnown RBP16.11■□□□□ 0.17
CTNS-202ENST00000381870 A0A1B0GUL6 1792 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 PAPPAQ13219 1627 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 ATAD5Q96QE3 1844 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 PYGBP11216 843 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 IGHMBP2P38935 993 aaKnown RBP16.11■□□□□ 0.17
CTNS-202ENST00000381870 GNAQP50148 359 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 JAM2P57087 298 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 ACVR2BQ13705 512 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 RRP1BQ14684 758 aaKnown RBP16.11■□□□□ 0.17
CTNS-202ENST00000381870 TMEM266Q2M3C6 531 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 DCAF17Q5H9S7 520 aaPredicted RBP16.11■□□□□ 0.17
CTNS-202ENST00000381870 FAM81AQ8TBF8 368 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 RFFLQ8WZ73 363 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 SLC7A6OSQ96CW6 309 aaPredicted RBP16.11■□□□□ 0.17
CTNS-202ENST00000381870 ZNF333Q96JL9 665 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 PITPNM3Q9BZ71 974 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 PPP1R12CQ9BZL4 782 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 C6orf50Q9HD87 102 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 SIX2Q9NPC8 291 aa16.11■□□□□ 0.17
CTNS-202ENST00000381870 CETN3O15182 167 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 TAC1P20366 129 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 CHRNA3P32297 505 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 MARCKSL1P49006 195 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 CCDC152Q4G0S7 254 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 IRGCQ6NXR0 463 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 CCDC137Q6PK04 289 aaKnown RBP16.1■□□□□ 0.17
CTNS-202ENST00000381870 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.1■□□□□ 0.17
CTNS-202ENST00000381870 DGKHQ86XP1 1220 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 CYP4X1Q8N118 509 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 ART4Q93070 314 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 MAGEB18Q96M61 343 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 EMILIN3Q9NT22 766 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 PARP2Q9UGN5 583 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 SEC63Q9UGP8 760 aaKnown RBP16.1■□□□□ 0.17
CTNS-202ENST00000381870 PITPNM2Q9BZ72 1349 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 NVLO15381 856 aaKnown RBP16.1■□□□□ 0.17
CTNS-202ENST00000381870 USP17L8P0C7I0 530 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 T-ENOLP0DO92 83 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 POLGP54098 1239 aaPredicted RBP16.1■□□□□ 0.17
CTNS-202ENST00000381870 MKRN3Q13064 507 aaKnown RBP16.1■□□□□ 0.17
CTNS-202ENST00000381870 RCN2Q14257 317 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 HERC4Q5GLZ8 1057 aaPredicted RBP16.1■□□□□ 0.17
CTNS-202ENST00000381870 SLC30A5Q8TAD4 765 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 KRT35Q92764 455 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 DYNLL2Q96FJ2 89 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 POP1Q99575 1024 aaKnown RBP16.1■□□□□ 0.17
CTNS-202ENST00000381870 LBHD1Q9BQE6 289 aaPredicted RBP16.1■□□□□ 0.17
CTNS-202ENST00000381870 UBE2OQ9C0C9 1292 aaKnown RBP16.1■□□□□ 0.17
CTNS-202ENST00000381870 LRRC27Q9C0I9 530 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.1■□□□□ 0.17
CTNS-202ENST00000381870 ARPP21Q9UBL0 812 aaPredicted RBP16.1■□□□□ 0.17
CTNS-202ENST00000381870 COG5Q9UP83 839 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 RPS6KL1Q9Y6S9 549 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 NCANO14594 1321 aa16.1■□□□□ 0.17
CTNS-202ENST00000381870 SIGLEC16A6NMB1 481 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 PODXLO00592 558 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 EDIL3O43854 480 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 CBX6O95503 412 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 SETDB1Q15047 1291 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 EPHA7Q15375 998 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 ZNF568Q3ZCX4 644 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 RUNDC3BQ96NL0 473 aa16.09■□□□□ 0.17
CTNS-202ENST00000381870 SERPINB12Q96P63 405 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms