RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 CCT5P48643 541 aa7.65□□□□□ -1.19
CCDC171-201ENST00000380701 ELAVL2Q12926 359 aaKnown RBP7.65□□□□□ -1.19
CCDC171-201ENST00000380701 TMEM132BQ14DG7 1078 aa7.65□□□□□ -1.19
CCDC171-201ENST00000380701 DCAF4L1Q3SXM0 396 aa7.65□□□□□ -1.19
CCDC171-201ENST00000380701 PRR5LQ6MZQ0 368 aa7.65□□□□□ -1.19
CCDC171-201ENST00000380701 RWDD4Q6NW29 188 aaKnown RBP7.65□□□□□ -1.19
CCDC171-201ENST00000380701 TTC8Q8TAM2 541 aa7.65□□□□□ -1.19
CCDC171-201ENST00000380701 RASGRP4Q8TDF6 673 aa7.65□□□□□ -1.19
CCDC171-201ENST00000380701 FAM84BQ96KN1 310 aaPredicted RBP7.65□□□□□ -1.19
CCDC171-201ENST00000380701 ZWILCHQ9H900 591 aa7.65□□□□□ -1.19
CCDC171-201ENST00000380701 SP110Q9HB58 689 aa7.65□□□□□ -1.19
CCDC171-201ENST00000380701 NDE1Q9NXR1 346 aa7.65□□□□□ -1.19
CCDC171-201ENST00000380701 TJP2Q9UDY2 1190 aa7.65□□□□□ -1.19
CCDC171-201ENST00000380701 BUB1O43683 1085 aa7.65□□□□□ -1.19
CCDC171-201ENST00000380701 PYGLP06737 847 aa7.65□□□□□ -1.19
CCDC171-201ENST00000380701 MARK3P27448 753 aa7.65□□□□□ -1.19
CCDC171-201ENST00000380701 TSGA10IPQ3SY00 556 aa7.65□□□□□ -1.19
CCDC171-201ENST00000380701 TMTC4Q5T4D3 741 aa7.65□□□□□ -1.19
CCDC171-201ENST00000380701 RESP18Q5W5W9 173 aa7.65□□□□□ -1.19
CCDC171-201ENST00000380701 ALS2CLQ60I27 953 aa7.65□□□□□ -1.19
CCDC171-201ENST00000380701 SPATA2LQ8IUW3 424 aaPredicted RBP7.65□□□□□ -1.19
CCDC171-201ENST00000380701 UPF3AQ9H1J1 476 aaKnown RBP7.65□□□□□ -1.19
CCDC171-201ENST00000380701 ZNF521Q96K83 1311 aa7.65□□□□□ -1.19
CCDC171-201ENST00000380701 CLIC2O15247 247 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 IGKV5-2P06315 115 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 APOA4P06727 396 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 SLC26A2P50443 739 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 HUNKP57058 714 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 SV2CQ496J9 727 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 SWSAP1Q6NVH7 229 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 FRMD5Q7Z6J6 570 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 ZNF589Q86UQ0 364 aaPredicted RBP7.64□□□□□ -1.19
CCDC171-201ENST00000380701 UCMAQ8WVF2 138 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 COLEC11Q9BWP8 271 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 DPH5Q9H2P9 285 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 ADARB2Q9NS39 739 aaKnown RBP7.64□□□□□ -1.19
CCDC171-201ENST00000380701 ANKEF1Q9NU02 776 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 CCL15-CCL14A0A0B4J2E2 113 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 MEIS1O00470 390 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 P4HA2O15460 535 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 SLC2A3P11169 496 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 SLC8A1P32418 973 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 VAMP7P51809 220 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 MKRN3Q13064 507 aaKnown RBP7.64□□□□□ -1.19
CCDC171-201ENST00000380701 KCNB1Q14721 858 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 TRADDQ15628 312 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 CCL15Q16663 113 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 C6orf118Q5T5N4 469 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 OTUB1Q96FW1 271 aaPredicted RBP7.64□□□□□ -1.19
CCDC171-201ENST00000380701 UIMC1Q96RL1 719 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 INTS9Q9NV88 658 aaKnown RBP7.64□□□□□ -1.19
CCDC171-201ENST00000380701 DNAJC12Q9UKB3 198 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 PACSIN2Q9UNF0 486 aaPredicted RBP7.64□□□□□ -1.19
CCDC171-201ENST00000380701 CROCC2H7BZ55 1655 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 NBPF26B4DH59 902 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 PRKCBP05771 671 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 CYP2C8P10632 490 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 DGKDQ16760 1214 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 RHPN2Q8IUC4 686 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 LRRC8AQ8IWT6 810 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 FBXL13Q8NEE6 735 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 KIFC3Q9BVG8 833 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 RASSF4Q9H2L5 321 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 ERAP1Q9NZ08 941 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 AGO2Q9UKV8 859 aaKnown RBP7.64□□□□□ -1.19
CCDC171-201ENST00000380701 DAGLAQ9Y4D2 1042 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 A8MXQ7 604 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 GADD45BO75293 160 aaPredicted RBP7.64□□□□□ -1.19
CCDC171-201ENST00000380701 LUC7L3O95232 432 aaKnown RBP7.64□□□□□ -1.19
CCDC171-201ENST00000380701 VPS41P49754 854 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 RESTQ13127 1097 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 ZNF235Q14590 738 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 FSCBQ5H9T9 825 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 DEPDC1BQ8WUY9 529 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 BPIFA3Q9BQP9 254 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 ELP3Q9H9T3 547 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 SUCLA2Q9P2R7 463 aaPredicted RBP7.64□□□□□ -1.19
CCDC171-201ENST00000380701 PXDNLA1KZ92 1463 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 CFAP99D6REC4 459 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 HMGCS2P54868 508 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 UGP2Q16851 508 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 SYDE1Q6ZW31 735 aaPredicted RBP7.64□□□□□ -1.19
CCDC171-201ENST00000380701 SFR1Q86XK3 245 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 ERO1BQ86YB8 467 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 SCYL3Q8IZE3 742 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 MCUQ8NE86 351 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 PYROXD1Q8WU10 500 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 LXNQ9BS40 222 aa7.64□□□□□ -1.19
CCDC171-201ENST00000380701 CNOT8Q9UFF9 292 aaKnown RBP7.64□□□□□ -1.19
CCDC171-201ENST00000380701 OSTNP61366 133 aa7.63□□□□□ -1.19
CCDC171-201ENST00000380701 PREPLQ4J6C6 727 aaPredicted RBP7.63□□□□□ -1.19
CCDC171-201ENST00000380701 TCP11X2Q5H9J9 407 aa7.63□□□□□ -1.19
CCDC171-201ENST00000380701 FAM182BQ5T319 152 aa7.63□□□□□ -1.19
CCDC171-201ENST00000380701 EMBQ6PCB8 327 aa7.63□□□□□ -1.19
CCDC171-201ENST00000380701 TRIM67Q6ZTA4 783 aa7.63□□□□□ -1.19
CCDC171-201ENST00000380701 MB21D2Q8IYB1 491 aaPredicted RBP7.63□□□□□ -1.19
CCDC171-201ENST00000380701 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.63□□□□□ -1.194e-7■■■■■ 58.1
CCDC171-201ENST00000380701 RUBCNQ92622 972 aa7.63□□□□□ -1.19
CCDC171-201ENST00000380701 OPTNQ96CV9 577 aa7.63□□□□□ -1.19
CCDC171-201ENST00000380701 PSMB7Q99436 277 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms