RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 PRPF6O94906 941 aaKnown RBP8.49□□□□□ -1.05
CDKL5-202ENST00000379996 ATP1A1P05023 1023 aaKnown RBP8.49□□□□□ -1.05
CDKL5-202ENST00000379996 PGK2P07205 417 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 CAPN2P17655 700 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 RPA1P27694 616 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 DNM2P50570 870 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 UBXN1Q04323 297 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 NCOA4Q13772 614 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 CYP2W1Q8TAV3 490 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 SCFD2Q8WU76 684 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 BAP1Q92560 729 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 NT5C3AQ9H0P0 336 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 HAUS4Q9H6D7 363 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 SUGCTQ9HAC7 445 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 ARFGAP3Q9NP61 516 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.49□□□□□ -1.05
CDKL5-202ENST00000379996 MYO6Q9UM54 1294 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 MAPK8IP1Q9UQF2 711 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 MCM3APO60318 1980 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 DOCK5Q9H7D0 1870 aa8.49□□□□□ -1.05
CDKL5-202ENST00000379996 LRRIQ3A6PVS8 624 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-202ENST00000379996 RPS6KA5O75582 802 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 ZNF211Q13398 564 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-202ENST00000379996 ECM1Q16610 540 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 MAP3K21Q5TCX8 1036 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 LRCH2Q5VUJ6 765 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 ERMNQ8TAM6 284 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 ABCB6Q9NP58 842 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 EXOC1Q9NV70 894 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 SRRDQ9UH36 339 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 TARSL2A2RTX5 802 aaKnown RBP8.48□□□□□ -1.05
CDKL5-202ENST00000379996 RBAK-RBAKDNI3L0D1 243 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 PDE2AO00408 941 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-202ENST00000379996 ZNF865P0CJ78 1059 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-202ENST00000379996 NCAPH2Q6IBW4 605 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 METTL7BQ6UX53 244 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 DPP9Q86TI2 863 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 CABP7Q86V35 215 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 CCDC170Q8IYT3 715 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 TUBGCP2Q9BSJ2 902 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 PUF60Q9UHX1 559 aaKnown RBP8.48□□□□□ -1.05
CDKL5-202ENST00000379996 EMSYQ7Z589 1322 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 IGSF9BQ9UPX0 1349 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 MYH10P35580 1976 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 SIP14410 1827 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 FARP2O94887 1054 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-202ENST00000379996 PSMC4P43686 418 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 ZBED6P86452 979 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 TTLL4Q14679 1199 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 CELF3Q5SZQ8 465 aaKnown RBP8.48□□□□□ -1.05
CDKL5-202ENST00000379996 TAF3Q5VWG9 929 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 KCNN1Q92952 543 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 CNOT6LQ96LI5 555 aaKnown RBP8.48□□□□□ -1.05
CDKL5-202ENST00000379996 MMS19Q96T76 1030 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 UPF3AQ9H1J1 476 aaKnown RBP8.48□□□□□ -1.05
CDKL5-202ENST00000379996 UNC45AQ9H3U1 944 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 VIPAS39Q9H9C1 493 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 HDAC6Q9UBN7 1215 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 LRWD1Q9UFC0 647 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 SLC27A5Q9Y2P5 690 aa8.48□□□□□ -1.05
CDKL5-202ENST00000379996 ANO9A1A5B4 782 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 MYMKA6NI61 221 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 PJA2O43164 708 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 DKC1O60832 514 aaKnown RBP eCLIP8.47□□□□□ -1.05
CDKL5-202ENST00000379996 GAS7O60861 476 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 CYBAP13498 195 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 UBA1P22314 1058 aaKnown RBP8.47□□□□□ -1.05
CDKL5-202ENST00000379996 ITIH3Q06033 890 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 HGSNATQ68CP4 663 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 ABHD15Q6UXT9 468 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 KCNK18Q7Z418 384 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 EXOC4Q96A65 974 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 DNAJC19Q96DA6 116 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 ALG2Q9H553 416 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 JPH1Q9HDC5 661 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-202ENST00000379996 FLRT1Q9NZU1 646 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 KCND2Q9NZV8 630 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 ARHGAP20Q9P2F6 1191 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 PLAGL2Q9UPG8 496 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 WDR64B1ANS9 1081 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 N4BP1O75113 896 aaKnown RBP8.47□□□□□ -1.05
CDKL5-202ENST00000379996 SYF2O95926 243 aaKnown RBP8.47□□□□□ -1.05
CDKL5-202ENST00000379996 SPATA31C1P0DKV0 1188 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 MYCLP12524 364 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-202ENST00000379996 TECP42680 631 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 TXKP42681 527 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 MARSP56192 900 aaKnown RBP8.47□□□□□ -1.05
CDKL5-202ENST00000379996 ACVR2BQ13705 512 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 DUSP28Q4G0W2 176 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 ZNF771Q7L3S4 317 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-202ENST00000379996 NHEJ1Q9H9Q4 299 aaPredicted RBP8.47□□□□□ -1.05
CDKL5-202ENST00000379996 DBR1Q9UK59 544 aaKnown RBP8.47□□□□□ -1.05
CDKL5-202ENST00000379996 GNEQ9Y223 722 aaKnown RBP8.47□□□□□ -1.05
CDKL5-202ENST00000379996 PVALEFA0A1B0GWK0 134 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 FRMD3A2A2Y4 597 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 PRMT3O60678 531 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 PPP1R2P41236 205 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 SLC26A2P50443 739 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 UBXN2AP68543 259 aa8.47□□□□□ -1.05
CDKL5-202ENST00000379996 SP2Q02086 613 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms