RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 SSTR3P32745 418 aaPredicted RBP11.74□□□□□ -0.53
NEDD9-201ENST00000379433 COPB2P35606 906 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 PTK2Q05397 1052 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 PCNX4Q63HM2 1172 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 HAUS6Q7Z4H7 955 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 PHLDB2Q86SQ0 1253 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 CTAGE6Q86UF2 777 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 CTAGE4Q8IX94 777 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 NSUN6Q8TEA1 469 aaKnown RBP11.74□□□□□ -0.53
NEDD9-201ENST00000379433 GOLGA1Q92805 767 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 SGIP1Q9BQI5 828 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 CARNS1A5YM72 827 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 POTEJP0CG39 1038 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 PON1P27169 355 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 CCND2P30279 289 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 DSG3P32926 999 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 PSMC2P35998 433 aaKnown RBP11.74□□□□□ -0.53
NEDD9-201ENST00000379433 C2orf54Q08AI8 447 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 ZNF746Q6NUN9 644 aaPredicted RBP11.74□□□□□ -0.53
NEDD9-201ENST00000379433 CCDC91Q7Z6B0 441 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 TRIM50Q86XT4 487 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 MS4A14Q96JA4 679 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 CEP63Q96MT8 703 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 MMS19Q96T76 1030 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 ACAD9Q9H845 621 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 KCND1Q9NSA2 647 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 SAR1BQ9Y6B6 198 aa11.74□□□□□ -0.53
NEDD9-201ENST00000379433 GREB1LQ9C091 1923 aaPredicted RBP11.74□□□□□ -0.53
NEDD9-201ENST00000379433 WDR64B1ANS9 1081 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 PDXKO00764 312 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 SP2Q02086 613 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 ANO5Q75V66 913 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 CCDC60Q8IWA6 550 aaPredicted RBP11.73□□□□□ -0.53
NEDD9-201ENST00000379433 SLC35C1Q96A29 364 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 RIT2Q99578 217 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 SYT17Q9BSW7 474 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 TOPORSQ9NS56 1045 aaPredicted RBP11.73□□□□□ -0.53
NEDD9-201ENST00000379433 CYP39A1Q9NYL5 469 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 DENND3A2RUS2 1198 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 GBP6Q6ZN66 633 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 CDR2LQ86X02 465 aaPredicted RBP11.73□□□□□ -0.53
NEDD9-201ENST00000379433 IFNLR1Q8IU57 520 aaPredicted RBP11.73□□□□□ -0.53
NEDD9-201ENST00000379433 COG1Q8WTW3 980 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 U2AF1L4Q8WU68 220 aaKnown RBP11.73□□□□□ -0.53
NEDD9-201ENST00000379433 BTBD7Q9P203 1132 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 ANKFY1Q9P2R3 1169 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 LRRIQ4A6NIV6 560 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 EFCAB8A8MWE9 144 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 HNRNPDLO14979 420 aaKnown RBP11.73□□□□□ -0.53
NEDD9-201ENST00000379433 ZNF862O60290 1169 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 PHACTR2O75167 634 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 RGS20O76081 388 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 GNA14O95837 355 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 CYP2C8P10632 490 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 VAV2P52735 878 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 MCCD1P59942 119 aaPredicted RBP11.73□□□□□ -0.53
NEDD9-201ENST00000379433 SLC7A5Q01650 507 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 GJC2Q5T442 439 aaPredicted RBP11.73□□□□□ -0.53
NEDD9-201ENST00000379433 MAP1SQ66K74 1059 aaPredicted RBP11.73□□□□□ -0.53
NEDD9-201ENST00000379433 CBWD2Q8IUF1 395 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 RASSF4Q9H2L5 321 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 JPH1Q9HDC5 661 aaPredicted RBP11.73□□□□□ -0.53
NEDD9-201ENST00000379433 ZNF446Q9NWS9 450 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 PCDHA10Q9Y5I2 948 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 UBIAD1Q9Y5Z9 338 aa11.73□□□□□ -0.53
NEDD9-201ENST00000379433 EMSYQ7Z589 1322 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 FRMD3A2A2Y4 597 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 CSDE1O75534 798 aaKnown RBP11.72□□□□□ -0.53
NEDD9-201ENST00000379433 KRT13P13646 458 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 GAP43P17677 238 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 GRM1Q13255 1194 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 MEA1Q16626 185 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 LY6KQ17RY6 165 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 TMEM63BQ5T3F8 832 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 CATSPERGQ6ZRH7 1159 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 ADAT2Q7Z6V5 191 aaKnown RBP11.72□□□□□ -0.53
NEDD9-201ENST00000379433 PPM1KQ8N3J5 372 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 POMGNT1Q8WZA1 660 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 KAT5Q92993 513 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 ARGLU1Q9NWB6 273 aaPredicted RBP11.72□□□□□ -0.53
NEDD9-201ENST00000379433 HOXC10Q9NYD6 342 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 CEP72Q9P209 647 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 EIF3CLB5ME19 914 aaKnown RBP11.72□□□□□ -0.53
NEDD9-201ENST00000379433 TACC1O75410 805 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 KLRC1P26715 233 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 PSMC5P62195 406 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 IGBP1P78318 339 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 MAP3K10Q02779 954 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 EDRF1Q3B7T1 1238 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 SRGAP1Q7Z6B7 1085 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 VSIG10LQ86VR7 867 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 GLYCTKQ8IVS8 523 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 RBM46Q8TBY0 533 aaKnown RBP11.72□□□□□ -0.53
NEDD9-201ENST00000379433 GLG1Q92896 1179 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 PNKPQ96T60 521 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 EIF3CQ99613 913 aaKnown RBP11.72□□□□□ -0.53
NEDD9-201ENST00000379433 PI4K2AQ9BTU6 479 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 KMT5AQ9NQR1 393 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 TBC1D22BQ9NU19 505 aa11.72□□□□□ -0.53
NEDD9-201ENST00000379433 PCDH10Q9P2E7 1040 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms