RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 LRIT3Q3SXY7 679 aa13.17□□□□□ -0.3
PCNA-201ENST00000379143 OTOP2Q7RTS6 562 aa13.17□□□□□ -0.3
PCNA-201ENST00000379143 FAM228AQ86W67 206 aa13.17□□□□□ -0.3
PCNA-201ENST00000379143 TDHQ8IZJ6 230 aa13.17□□□□□ -0.3
PCNA-201ENST00000379143 DAW1Q8N136 415 aa13.17□□□□□ -0.3
PCNA-201ENST00000379143 DEPTORQ8TB45 409 aa13.17□□□□□ -0.3
PCNA-201ENST00000379143 DDX12PQ92771 950 aa13.17□□□□□ -0.3
PCNA-201ENST00000379143 ZNF668Q96K58 619 aaPredicted RBP13.17□□□□□ -0.3
PCNA-201ENST00000379143 GBP4Q96PP9 640 aa13.17□□□□□ -0.3
PCNA-201ENST00000379143 REEP2Q9BRK0 252 aa13.17□□□□□ -0.3
PCNA-201ENST00000379143 NTPCRQ9BSD7 190 aaKnown RBP13.17□□□□□ -0.3
PCNA-201ENST00000379143 AGO3Q9H9G7 860 aaKnown RBP13.17□□□□□ -0.3
PCNA-201ENST00000379143 PARVGQ9HBI0 331 aa13.17□□□□□ -0.3
PCNA-201ENST00000379143 ERVK-5Q9HDB9 667 aa13.17□□□□□ -0.3
PCNA-201ENST00000379143 ST3GAL5Q9UNP4 418 aa13.17□□□□□ -0.3
PCNA-201ENST00000379143 H0YCG3 227 aa13.16□□□□□ -0.3
PCNA-201ENST00000379143 ERLIN2O94905 339 aa13.16□□□□□ -0.3
PCNA-201ENST00000379143 FAM13AO94988 1023 aa13.16□□□□□ -0.3
PCNA-201ENST00000379143 PLS3P13797 630 aa13.16□□□□□ -0.3
PCNA-201ENST00000379143 ABCD1P33897 745 aa13.16□□□□□ -0.3
PCNA-201ENST00000379143 KCNJ6P48051 423 aa13.16□□□□□ -0.3
PCNA-201ENST00000379143 EFNA5P52803 228 aa13.16□□□□□ -0.3
PCNA-201ENST00000379143 PEX3P56589 373 aa13.16□□□□□ -0.3
PCNA-201ENST00000379143 RAD51AP2Q09MP3 1159 aa13.16□□□□□ -0.3
PCNA-201ENST00000379143 MAPK7Q13164 816 aa13.16□□□□□ -0.3
PCNA-201ENST00000379143 SHHQ15465 462 aa13.16□□□□□ -0.3
PCNA-201ENST00000379143 CDCA2Q69YH5 1023 aaPredicted RBP13.16□□□□□ -0.3
PCNA-201ENST00000379143 SPIRE2Q8WWL2 714 aa13.16□□□□□ -0.3
PCNA-201ENST00000379143 RNPC3Q96LT9 517 aaKnown RBP13.16□□□□□ -0.3
PCNA-201ENST00000379143 CHST12Q9NRB3 414 aa13.16□□□□□ -0.3
PCNA-201ENST00000379143 MTMR10Q9NXD2 777 aa13.16□□□□□ -0.3
PCNA-201ENST00000379143 DENND3A2RUS2 1198 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 MYMKA6NI61 221 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 CCDC169A6NNP5 214 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 ZBBXA8MT70 800 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 INO80B-WBP1J3KQ70 363 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 MYL1P05976 194 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 ZSCAN20P17040 1043 aaPredicted RBP13.15□□□□□ -0.3
PCNA-201ENST00000379143 AXLP30530 894 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 NPTX2P47972 431 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 ZNF131P52739 623 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 C9orf50Q5SZB4 431 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 RASIP1Q5U651 963 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 KANK3Q6NY19 840 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 CNNM4Q6P4Q7 775 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 DYMQ7RTS9 669 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 CATSPER4Q7RTX7 472 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 BSNDQ8WZ55 320 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 PRIMPOLQ96LW4 560 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 OSBPL7Q9BZF2 842 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 KMT5AQ9NQR1 393 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 PRMT7Q9NVM4 692 aaPredicted RBP13.15□□□□□ -0.3
PCNA-201ENST00000379143 DACT1Q9NYF0 836 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 SEL1LQ9UBV2 794 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 SERTAD1Q9UHV2 236 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 SLC4A7Q9Y6M7 1214 aa13.15□□□□□ -0.3
PCNA-201ENST00000379143 MYH11P35749 1972 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 NPHP3-ACAD11A0A0J9YXS1 232 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 SFI1A8K8P3 1242 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 GOLGA6L22H0YM25 854 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 K7ERI5 159 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 ACTN4O43707 911 aaKnown RBP13.14□□□□□ -0.31
PCNA-201ENST00000379143 ZNF202O95125 648 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 AMHP03971 560 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 GAP43P17677 238 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 UBE2HP62256 183 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 MBTD1Q05BQ5 628 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 FAM160A1Q05DH4 1040 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 MAPK6Q16659 721 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 FAM187BQ17R55 369 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 LONRF3Q496Y0 759 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 TPRNQ4KMQ1 711 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 CCDC65Q8IXS2 484 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 MYCT1Q8N699 235 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 CNNM3Q8NE01 707 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 PHOSPHO2Q8TCD6 241 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 DNAJC19Q96DA6 116 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 SLC9A7Q96T83 725 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 C7orf25Q9BPX7 421 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 TRIM9Q9C026 710 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 GOLPH3LQ9H4A5 285 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 ZHX3Q9H4I2 956 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 TMEM134Q9H6X4 195 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 MINDY3Q9H8M7 445 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 POLD4Q9HCU8 107 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 RGS18Q9NS28 235 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 C1orf112Q9NSG2 853 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 AGPAT5Q9NUQ2 364 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 ARHGAP28Q9P2N2 729 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 TET1Q8NFU7 2136 aa13.14□□□□□ -0.31
PCNA-201ENST00000379143 TRAK2O60296 914 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 CSDE1O75534 798 aaKnown RBP13.13□□□□□ -0.31
PCNA-201ENST00000379143 MAPTP10636 758 aaKnown RBP13.13□□□□□ -0.31
PCNA-201ENST00000379143 SKIP12755 728 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 IDEP14735 1019 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 NCKAP1LP55160 1127 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 WDR5P61964 334 aaKnown RBP13.13□□□□□ -0.31
PCNA-201ENST00000379143 SLC24A5Q71RS6 500 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 FAM178BQ8IXR5 827 aa13.13□□□□□ -0.31
PCNA-201ENST00000379143 FMR1NBQ8N0W7 255 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms