RNA–Protein interactions for RNA: ENST00000378883.5

MCM8-202, Transcript of minichromosome maintenance 8 homologous recombination repair factor, humanhuman

TSL 1 (best) BASIC

Gene MCM8, Length 3,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM8-202ENST00000378883 CDR2Q01850 454 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 PRPF4BQ13523 1007 aaKnown RBP9.48□□□□□ -0.89
MCM8-202ENST00000378883 BTG3Q14201 252 aaPredicted RBP9.48□□□□□ -0.89
MCM8-202ENST00000378883 KLC3Q6P597 504 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 NCCRP1Q6ZVX7 275 aaPredicted RBP9.48□□□□□ -0.89
MCM8-202ENST00000378883 NME8Q8N427 588 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 SNRNP27Q8WVK2 155 aaKnown RBP9.48□□□□□ -0.89
MCM8-202ENST00000378883 TSPAN18Q96SJ8 248 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 CCSER1Q9C0I3 900 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 KRT82Q9NSB4 513 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 GRHL1Q9NZI5 618 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 RASAL2Q9UJF2 1139 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 TTC7AQ9ULT0 858 aaPredicted RBP9.48□□□□□ -0.89
MCM8-202ENST00000378883 TBC1D30Q9Y2I9 924 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 MYH4Q9Y623 1939 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 FAM196BA6NMK8 535 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 PABPC4LP0CB38 370 aaKnown RBP9.48□□□□□ -0.89
MCM8-202ENST00000378883 POTEJP0CG39 1038 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 RARGP13631 454 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 PHEXP78562 749 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 DHX34Q14147 1143 aaKnown RBP9.48□□□□□ -0.89
MCM8-202ENST00000378883 SLC4A8Q2Y0W8 1093 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 ZCWPW2Q504Y3 356 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 ZNF790Q6PG37 636 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 ARHGEF18Q6ZSZ5 1173 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 SLFN11Q7Z7L1 901 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 NT5DC3Q86UY8 548 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 NELFCDQ8IXH7 590 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 ARL10Q8N8L6 244 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 CORO1BQ9BR76 489 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 STX18Q9P2W9 335 aaKnown RBP9.48□□□□□ -0.89
MCM8-202ENST00000378883 ZNF212Q9UDV6 495 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 SUN2Q9UH99 717 aa9.48□□□□□ -0.89
MCM8-202ENST00000378883 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.47□□□□□ -0.89
MCM8-202ENST00000378883 FER1L4A9Z1Z3 1794 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 DDX3XO00571 662 aaKnown RBP eCLIP9.47□□□□□ -0.899e-8■■□□□ 11.8
MCM8-202ENST00000378883 PDE6AP16499 860 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 FOXN2P32314 431 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.47□□□□□ -0.89
MCM8-202ENST00000378883 COBLL1Q53SF7 1204 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 DAB2IPQ5VWQ8 1189 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 ST13P4Q8IZP2 240 aaPredicted RBP9.47□□□□□ -0.89
MCM8-202ENST00000378883 SYCE1Q8N0S2 351 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 HES6Q96HZ4 224 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 SERPINB12Q96P63 405 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 MTA3Q9BTC8 594 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 PIH1D3Q9NQM4 214 aaKnown RBP9.47□□□□□ -0.89
MCM8-202ENST00000378883 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.47□□□□□ -0.89
MCM8-202ENST00000378883 STK32BQ9NY57 414 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 NKIRAS1Q9NYS0 192 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 STARD13Q9Y3M8 1113 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 PFASO15067 1338 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 NPHP3-ACAD11A0A0J9YXS1 232 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 ZFXP17010 805 aaPredicted RBP9.47□□□□□ -0.89
MCM8-202ENST00000378883 PLCG1P19174 1290 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 RPL21P46778 160 aaKnown RBP9.47□□□□□ -0.89
MCM8-202ENST00000378883 PTK2Q05397 1052 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 STRN3Q13033 797 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 MAPK7Q13164 816 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 TMED1Q13445 227 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 R3HDM1Q15032 1099 aaKnown RBP9.47□□□□□ -0.89
MCM8-202ENST00000378883 CCDC92Q53HC0 331 aaPredicted RBP9.47□□□□□ -0.89
MCM8-202ENST00000378883 STMN2Q93045 179 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 NMD3Q96D46 503 aaKnown RBP9.47□□□□□ -0.89
MCM8-202ENST00000378883 RUNDC3BQ96NL0 473 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 MIPEPQ99797 713 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 C7orf25Q9BPX7 421 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 SYNCQ9H7C4 482 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 ERVK-5Q9HDB9 667 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 PARP2Q9UGN5 583 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 ARMCX3Q9UH62 379 aaPredicted RBP9.47□□□□□ -0.89
MCM8-202ENST00000378883 ADAMTS3O15072 1205 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 LTKP29376 864 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 ADARP55265 1226 aaKnown RBP9.47□□□□□ -0.89
MCM8-202ENST00000378883 KBTBD12Q3ZCT8 623 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 CFAP157Q5JU67 520 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 TBC1D9BQ66K14 1250 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 TSHZ1Q6ZSZ6 1077 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 MAP7D3Q8IWC1 876 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 IP6K1Q92551 441 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 CADM1Q9BY67 442 aaKnown RBP9.47□□□□□ -0.89
MCM8-202ENST00000378883 MAGEF1Q9HAY2 307 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 AMFRQ9UKV5 643 aa9.47□□□□□ -0.89
MCM8-202ENST00000378883 RTL9Q8NET4 1388 aa9.46□□□□□ -0.89
MCM8-202ENST00000378883 TMEM259Q4ZIN3 620 aa9.46□□□□□ -0.89
MCM8-202ENST00000378883 SLC44A4Q53GD3 710 aa9.46□□□□□ -0.89
MCM8-202ENST00000378883 TAF1BQ53T94 588 aaPredicted RBP9.46□□□□□ -0.89
MCM8-202ENST00000378883 ALKBH5Q6P6C2 394 aaKnown RBP9.46□□□□□ -0.89
MCM8-202ENST00000378883 CCDC25Q86WR0 208 aa9.46□□□□□ -0.89
MCM8-202ENST00000378883 SCUBE1Q8IWY4 988 aa9.46□□□□□ -0.89
MCM8-202ENST00000378883 ARHGEF1Q92888 912 aaKnown RBP9.46□□□□□ -0.89
MCM8-202ENST00000378883 OXCT2Q9BYC2 517 aaPredicted RBP9.46□□□□□ -0.89
MCM8-202ENST00000378883 BRD8Q9H0E9 1235 aa9.46□□□□□ -0.89
MCM8-202ENST00000378883 NAGPAQ9UK23 515 aa9.46□□□□□ -0.89
MCM8-202ENST00000378883 UMODL1Q5DID0 1318 aa9.46□□□□□ -0.89
MCM8-202ENST00000378883 TNKSO95271 1327 aa9.46□□□□□ -0.9
MCM8-202ENST00000378883 PAX3P23760 479 aa9.46□□□□□ -0.9
MCM8-202ENST00000378883 MOGSQ13724 837 aa9.46□□□□□ -0.9
MCM8-202ENST00000378883 LRRC55Q6ZSA7 311 aa9.46□□□□□ -0.9
MCM8-202ENST00000378883 CCDC80Q76M96 950 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms