RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 TAGAPQ8N103 731 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 ARHGAP18Q8N392 663 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 ETNK1Q9HBU6 452 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 ADGRL2O95490 1459 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 NR3C1P04150 777 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 DDX5P17844 614 aaKnown RBP11.91□□□□□ -0.5
RAD50-201ENST00000378823 CHRNA3P32297 505 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 MAPK6Q16659 721 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 EEPD1Q7L9B9 569 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 LCORLQ8N3X6 602 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 PUS3Q9BZE2 481 aaKnown RBP11.91□□□□□ -0.5
RAD50-201ENST00000378823 DNAJC12Q9UKB3 198 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 RPAP1Q9BWH6 1393 aaPredicted RBP11.91□□□□□ -0.5
RAD50-201ENST00000378823 SFI1A8K8P3 1242 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 KDM1AO60341 852 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 CSPG5O95196 566 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 USP17L8P0C7I0 530 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 GNAT1P11488 350 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 SLC10A5Q5PT55 438 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 XXYLT1Q8NBI6 393 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 YIPF3Q9GZM5 350 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 ITM2BQ9Y287 266 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 MRPS15P82914 257 aaKnown RBP11.91□□□□□ -0.5
RAD50-201ENST00000378823 GRIN1Q05586 938 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 TRIM60Q495X7 471 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 NLGN1Q8N2Q7 840 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 TOPORSQ9NS56 1045 aaPredicted RBP11.91□□□□□ -0.5
RAD50-201ENST00000378823 KRT87PA6NCN2 255 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 ACBD5Q5T8D3 534 aaPredicted RBP11.91□□□□□ -0.5
RAD50-201ENST00000378823 CCDC137Q6PK04 289 aaKnown RBP11.91□□□□□ -0.5
RAD50-201ENST00000378823 ATP11CQ8NB49 1132 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 HEMGNQ9BXL5 484 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 ZNF229Q9UJW7 825 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 PNMA3Q9UL41 463 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 BRAFP15056 766 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 STX19Q8N4C7 294 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 CYP4F11Q9HBI6 524 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 SARS2Q9NP81 518 aaKnown RBP11.91□□□□□ -0.5
RAD50-201ENST00000378823 SEL1LQ9UBV2 794 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 ARHGEF5Q12774 1597 aa11.91□□□□□ -0.5
RAD50-201ENST00000378823 RASSF10A6NK89 507 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 SLC27A3Q5K4L6 730 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 TRIM72Q6ZMU5 477 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 RASSF3Q86WH2 238 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 ARMC2Q8NEN0 867 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 ZNF564Q8TBZ8 553 aaPredicted RBP11.9□□□□□ -0.5
RAD50-201ENST00000378823 SLC9A2Q9UBY0 812 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 IP6K2Q9UHH9 426 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 PRCPP42785 496 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 CTTNQ14247 550 aaKnown RBP11.9□□□□□ -0.5
RAD50-201ENST00000378823 ZNF394Q53GI3 561 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 RNF135Q8IUD6 432 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 TRIM54Q9BYV2 358 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 CDC42BPAQ5VT25 1732 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 HAUS5O94927 633 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 RBBP7Q16576 425 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 HIF1AQ16665 826 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 CCNYL1Q8N7R7 359 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 CDK8P49336 464 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 PRAMEP78395 509 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 MRPL28Q13084 256 aaKnown RBP11.9□□□□□ -0.5
RAD50-201ENST00000378823 MED21Q13503 144 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 KIAA2013Q8IYS2 634 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 PPM1NQ8N819 430 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 EDEM3Q9BZQ6 932 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 RUBCNLQ9H714 662 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 GNA15P30679 374 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 HSPA2P54652 639 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 ROR1Q01973 937 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 TNFAIP2Q03169 654 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 RRM2BQ7LG56 351 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 STAMBPL1Q96FJ0 436 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 PPP1R16BQ96T49 567 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 BRIP1Q9BX63 1249 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 ANO9A1A5B4 782 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 HADHAP40939 763 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 RAD23BP54727 409 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 PSMC1P62191 440 aaKnown RBP11.9□□□□□ -0.5
RAD50-201ENST00000378823 MAPRE2Q15555 327 aa11.9□□□□□ -0.5
RAD50-201ENST00000378823 HUS1O60921 280 aa11.9□□□□□ -0.51
RAD50-201ENST00000378823 DNAJC6O75061 913 aa11.9□□□□□ -0.51
RAD50-201ENST00000378823 LRRC8EQ6NSJ5 796 aa11.9□□□□□ -0.51
RAD50-201ENST00000378823 CC2D1AQ6P1N0 951 aaPredicted RBP11.9□□□□□ -0.51
RAD50-201ENST00000378823 ATP6V0A4Q9HBG4 840 aa11.9□□□□□ -0.51
RAD50-201ENST00000378823 DDX56Q9NY93 547 aaKnown RBP11.9□□□□□ -0.51
RAD50-201ENST00000378823 NEMP1O14524 444 aa11.89□□□□□ -0.51
RAD50-201ENST00000378823 FOXP2O15409 715 aa11.89□□□□□ -0.51
RAD50-201ENST00000378823 MYO1DO94832 1006 aa11.89□□□□□ -0.51
RAD50-201ENST00000378823 ARFIP2P53365 341 aa11.89□□□□□ -0.51
RAD50-201ENST00000378823 PMS1P54277 932 aaKnown RBP11.89□□□□□ -0.51
RAD50-201ENST00000378823 TAP1Q03518 808 aa11.89□□□□□ -0.51
RAD50-201ENST00000378823 AP3B2Q13367 1082 aa11.89□□□□□ -0.51
RAD50-201ENST00000378823 CAPRIN2Q6IMN6 1127 aaKnown RBP11.89□□□□□ -0.51
RAD50-201ENST00000378823 ELMOD1Q8N336 334 aa11.89□□□□□ -0.51
RAD50-201ENST00000378823 ENAHQ8N8S7 591 aaPredicted RBP11.89□□□□□ -0.51
RAD50-201ENST00000378823 KLC4Q9NSK0 619 aa11.89□□□□□ -0.51
RAD50-201ENST00000378823 SENP1Q9P0U3 644 aa11.89□□□□□ -0.51
RAD50-201ENST00000378823 LRRC53A6NM62 1247 aa11.89□□□□□ -0.51
RAD50-201ENST00000378823 KCNV2Q8TDN2 545 aa11.89□□□□□ -0.51
RAD50-201ENST00000378823 OSBP2Q969R2 916 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms