RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 ATP2C1P98194 919 aaPredicted RBP17.1■□□□□ 0.33
RAB4B-202ENST00000378307 MXD4Q14582 209 aaPredicted RBP17.1■□□□□ 0.33
RAB4B-202ENST00000378307 PTPROQ16827 1216 aa17.1■□□□□ 0.33
RAB4B-202ENST00000378307 TJAP1Q5JTD0 557 aa17.1■□□□□ 0.33
RAB4B-202ENST00000378307 UBXN11Q5T124 520 aa17.1■□□□□ 0.33
RAB4B-202ENST00000378307 CCDC43Q96MW1 224 aaKnown RBP17.1■□□□□ 0.33
RAB4B-202ENST00000378307 POLR3FQ9H1D9 316 aaPredicted RBP17.1■□□□□ 0.33
RAB4B-202ENST00000378307 FAM105AQ9NUU6 356 aa17.1■□□□□ 0.33
RAB4B-202ENST00000378307 DACT1Q9NYF0 836 aa17.1■□□□□ 0.33
RAB4B-202ENST00000378307 KIAA1024Q9UPX6 916 aa17.1■□□□□ 0.33
RAB4B-202ENST00000378307 PCDHGC5Q9Y5F6 944 aa17.1■□□□□ 0.33
RAB4B-202ENST00000378307 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.09■□□□□ 0.33
RAB4B-202ENST00000378307 TSPAN1O60635 241 aa17.09■□□□□ 0.33
RAB4B-202ENST00000378307 PRPHP41219 470 aa17.09■□□□□ 0.33
RAB4B-202ENST00000378307 MBTD1Q05BQ5 628 aa17.09■□□□□ 0.33
RAB4B-202ENST00000378307 POU5F1BQ06416 359 aa17.09■□□□□ 0.33
RAB4B-202ENST00000378307 AMHR2Q16671 573 aa17.09■□□□□ 0.33
RAB4B-202ENST00000378307 SPOUT1Q5T280 376 aaKnown RBP17.09■□□□□ 0.33
RAB4B-202ENST00000378307 PADI6Q6TGC4 694 aa17.09■□□□□ 0.33
RAB4B-202ENST00000378307 DTHD1Q6ZMT9 781 aa17.09■□□□□ 0.33
RAB4B-202ENST00000378307 IFNLR1Q8IU57 520 aaPredicted RBP17.09■□□□□ 0.33
RAB4B-202ENST00000378307 COLGALT1Q8NBJ5 622 aa17.09■□□□□ 0.33
RAB4B-202ENST00000378307 SNX29Q8TEQ0 813 aa17.09■□□□□ 0.33
RAB4B-202ENST00000378307 BSNDQ8WZ55 320 aa17.09■□□□□ 0.33
RAB4B-202ENST00000378307 HLA-CQ95604 372 aa17.09■□□□□ 0.33
RAB4B-202ENST00000378307 CPB2Q96IY4 423 aa17.09■□□□□ 0.33
RAB4B-202ENST00000378307 FOXD4L1Q9NU39 408 aa17.09■□□□□ 0.33
RAB4B-202ENST00000378307 DDX19AQ9NUU7 478 aaKnown RBP17.09■□□□□ 0.33
RAB4B-202ENST00000378307 RNF216Q9NWF9 866 aaPredicted RBP17.09■□□□□ 0.33
RAB4B-202ENST00000378307 E9PMD0 336 aa17.08■□□□□ 0.32
RAB4B-202ENST00000378307 INO80B-WBP1J3KQ70 363 aa17.08■□□□□ 0.32
RAB4B-202ENST00000378307 LAD1O00515 517 aa17.08■□□□□ 0.32
RAB4B-202ENST00000378307 ZNF623O75123 536 aa17.08■□□□□ 0.32
RAB4B-202ENST00000378307 BMP1P13497 986 aa17.08■□□□□ 0.32
RAB4B-202ENST00000378307 MUTP22033 750 aa17.08■□□□□ 0.32
RAB4B-202ENST00000378307 GTF2F1P35269 517 aaKnown RBP eCLIP17.08■□□□□ 0.322e-8■■■■■ 34.1
RAB4B-202ENST00000378307 AFF1P51825 1210 aaKnown RBP17.08■□□□□ 0.32
RAB4B-202ENST00000378307 HAUS3Q68CZ6 603 aa17.08■□□□□ 0.32
RAB4B-202ENST00000378307 KCNK18Q7Z418 384 aa17.08■□□□□ 0.32
RAB4B-202ENST00000378307 POF1BQ8WVV4 589 aa17.08■□□□□ 0.32
RAB4B-202ENST00000378307 LMAN2LQ9H0V9 348 aa17.08■□□□□ 0.32
RAB4B-202ENST00000378307 BHMT2Q9H2M3 363 aa17.08■□□□□ 0.32
RAB4B-202ENST00000378307 NSUN3Q9H649 340 aaKnown RBP17.08■□□□□ 0.32
RAB4B-202ENST00000378307 COG5Q9UP83 839 aa17.08■□□□□ 0.32
RAB4B-202ENST00000378307 PCDHB2Q9Y5E7 798 aa17.08■□□□□ 0.32
RAB4B-202ENST00000378307 C5orf42Q9H799 3197 aa17.08■□□□□ 0.32
RAB4B-202ENST00000378307 ARHGEF35A5YM69 484 aa17.07■□□□□ 0.32
RAB4B-202ENST00000378307 B4GALT5O43286 388 aa17.07■□□□□ 0.32
RAB4B-202ENST00000378307 HOXA2O43364 376 aa17.07■□□□□ 0.32
RAB4B-202ENST00000378307 FGF18O76093 207 aa17.07■□□□□ 0.32
RAB4B-202ENST00000378307 CYP11B2P19099 503 aa17.07■□□□□ 0.32
RAB4B-202ENST00000378307 HYAL1Q12794 435 aa17.07■□□□□ 0.32
RAB4B-202ENST00000378307 TFDP1Q14186 410 aa17.07■□□□□ 0.32
RAB4B-202ENST00000378307 TIGD5Q53EQ6 642 aa17.07■□□□□ 0.32
RAB4B-202ENST00000378307 NAALADL2Q58DX5 795 aa17.07■□□□□ 0.32
RAB4B-202ENST00000378307 AGMOQ6ZNB7 445 aa17.07■□□□□ 0.32
RAB4B-202ENST00000378307 MRPL10Q7Z7H8 261 aaKnown RBP17.07■□□□□ 0.32
RAB4B-202ENST00000378307 ADGRD2Q7Z7M1 963 aa17.07■□□□□ 0.32
RAB4B-202ENST00000378307 CDR2LQ86X02 465 aaPredicted RBP17.07■□□□□ 0.32
RAB4B-202ENST00000378307 SMG8Q8ND04 991 aaKnown RBP17.07■□□□□ 0.32
RAB4B-202ENST00000378307 EIF2AQ9BY44 585 aaKnown RBP17.07■□□□□ 0.32
RAB4B-202ENST00000378307 NFKBIZQ9BYH8 718 aa17.07■□□□□ 0.32
RAB4B-202ENST00000378307 UBE2ZQ9H832 354 aaPredicted RBP17.07■□□□□ 0.32
RAB4B-202ENST00000378307 TTC28Q96AY4 2481 aa17.07■□□□□ 0.32
RAB4B-202ENST00000378307 VPS37CA5D8V6 355 aaPredicted RBP17.06■□□□□ 0.32
RAB4B-202ENST00000378307 VWA3AA6NCI4 1184 aa17.06■□□□□ 0.32
RAB4B-202ENST00000378307 TTLL13PA6NNM8 815 aa17.06■□□□□ 0.32
RAB4B-202ENST00000378307 K7ELQ4 463 aaPredicted RBP17.06■□□□□ 0.32
RAB4B-202ENST00000378307 B4GALT3O60512 393 aa17.06■□□□□ 0.32
RAB4B-202ENST00000378307 OFD1O75665 1012 aa17.06■□□□□ 0.32
RAB4B-202ENST00000378307 EDN1P05305 212 aa17.06■□□□□ 0.32
RAB4B-202ENST00000378307 ARF4P18085 180 aaPredicted RBP17.06■□□□□ 0.32
RAB4B-202ENST00000378307 SYT1P21579 422 aa17.06■□□□□ 0.32
RAB4B-202ENST00000378307 ERVFC1P60507 584 aa17.06■□□□□ 0.32
RAB4B-202ENST00000378307 GRIN1Q05586 938 aa17.06■□□□□ 0.32
RAB4B-202ENST00000378307 KRT79Q5XKE5 535 aa17.06■□□□□ 0.32
RAB4B-202ENST00000378307 FAM173BQ6P4H8 233 aa17.06■□□□□ 0.32
RAB4B-202ENST00000378307 KCNT2Q6UVM3 1135 aa17.06■□□□□ 0.32
RAB4B-202ENST00000378307 ABI1Q8IZP0 508 aa17.06■□□□□ 0.32
RAB4B-202ENST00000378307 LRRC43Q8N309 656 aa17.06■□□□□ 0.32
RAB4B-202ENST00000378307 MCPH1Q8NEM0 835 aa17.06■□□□□ 0.32
RAB4B-202ENST00000378307 NECAB3Q96P71 396 aaPredicted RBP17.06■□□□□ 0.32
RAB4B-202ENST00000378307 PNMA5Q96PV4 448 aa17.06■□□□□ 0.32
RAB4B-202ENST00000378307 RNF39Q9H2S5 420 aa17.06■□□□□ 0.32
RAB4B-202ENST00000378307 USP20Q9Y2K6 914 aa17.06■□□□□ 0.32
RAB4B-202ENST00000378307 PCDHB12Q9Y5F1 795 aa17.06■□□□□ 0.32
RAB4B-202ENST00000378307 LRRIQ4A6NIV6 560 aa17.05■□□□□ 0.32
RAB4B-202ENST00000378307 NT5C1B-RDH14C9J2C7 533 aa17.05■□□□□ 0.32
RAB4B-202ENST00000378307 ERLIN2O94905 339 aa17.05■□□□□ 0.32
RAB4B-202ENST00000378307 LAG3P18627 525 aa17.05■□□□□ 0.32
RAB4B-202ENST00000378307 LTBRP36941 435 aa17.05■□□□□ 0.32
RAB4B-202ENST00000378307 RAB27AP51159 221 aa17.05■□□□□ 0.32
RAB4B-202ENST00000378307 DLX2Q07687 328 aaPredicted RBP17.05■□□□□ 0.32
RAB4B-202ENST00000378307 COL19A1Q14993 1142 aa17.05■□□□□ 0.32
RAB4B-202ENST00000378307 CDCA2Q69YH5 1023 aaPredicted RBP17.05■□□□□ 0.32
RAB4B-202ENST00000378307 THNSL1Q8IYQ7 743 aa17.05■□□□□ 0.32
RAB4B-202ENST00000378307 INTS4Q96HW7 963 aaKnown RBP17.05■□□□□ 0.32
RAB4B-202ENST00000378307 PLIN2Q99541 437 aa17.05■□□□□ 0.32
RAB4B-202ENST00000378307 RAB34Q9BZG1 259 aa17.05■□□□□ 0.32
RAB4B-202ENST00000378307 AAASQ9NRG9 546 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms