RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 SLC12A6Q9UHW9 1150 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 CDC42BPGQ6DT37 1551 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 NR3C1P04150 777 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 GPC5P78333 572 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 CDR2Q01850 454 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 YWHAHQ04917 246 aaPredicted RBP12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 FBXW10Q5XX13 1052 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 MARCH10Q8NA82 808 aaPredicted RBP12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 KANSL2Q9H9L4 492 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 TTC7AQ9ULT0 858 aaPredicted RBP12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 JCADQ9P266 1359 aa12.78□□□□□ -0.36
PCDHA9-201ENST00000378122 PI4K2BG5E9Z4 385 aa12.77□□□□□ -0.36
PCDHA9-201ENST00000378122 EPHB1P54762 984 aa12.77□□□□□ -0.36
PCDHA9-201ENST00000378122 TBC1D9BQ66K14 1250 aa12.77□□□□□ -0.36
PCDHA9-201ENST00000378122 TEX2Q8IWB9 1127 aa12.77□□□□□ -0.36
PCDHA9-201ENST00000378122 RNF139Q8WU17 664 aa12.77□□□□□ -0.36
PCDHA9-201ENST00000378122 NRBF2Q96F24 287 aa12.77□□□□□ -0.36
PCDHA9-201ENST00000378122 PRMT1Q99873 361 aaKnown RBP12.77□□□□□ -0.36
PCDHA9-201ENST00000378122 hCG_2014768A0A024R1R8 64 aa12.77□□□□□ -0.36
PCDHA9-201ENST00000378122 PP2D1A8MPX8 630 aa12.77□□□□□ -0.36
PCDHA9-201ENST00000378122 FCER1AP12319 257 aa12.77□□□□□ -0.36
PCDHA9-201ENST00000378122 CYP2C19P33261 490 aa12.77□□□□□ -0.36
PCDHA9-201ENST00000378122 CRKP46108 304 aa12.77□□□□□ -0.36
PCDHA9-201ENST00000378122 PCDHA6Q9UN73 950 aa12.77□□□□□ -0.36
PCDHA9-201ENST00000378122 PCDHA8Q9Y5H6 950 aa12.77□□□□□ -0.36
PCDHA9-201ENST00000378122 PREX2Q70Z35 1606 aa12.77□□□□□ -0.36
PCDHA9-201ENST00000378122 CYP2E1P05181 493 aaPredicted RBP12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 KPNA2P52292 529 aaKnown RBP12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 KCNH2Q12809 1159 aa12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 SPP2Q13103 211 aa12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 MB21D2Q8IYB1 491 aaPredicted RBP12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 PIGBQ92521 554 aa12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 NUDCD1Q96RS6 583 aa12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 DDX47Q9H0S4 455 aaKnown RBP12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 SUFUQ9UMX1 484 aa12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 MBD5Q9P267 1494 aa12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 HOXA7P31268 230 aaPredicted RBP12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 ARL4CP56559 192 aa12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 MDM2Q00987 491 aaPredicted RBP12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 DYNC1I2Q13409 638 aaKnown RBP12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 ARHGEF1Q92888 912 aaKnown RBP12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 CEP19Q96LK0 163 aa12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 TRPV6Q9H1D0 765 aa12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 TAF1DQ9H5J8 278 aaPredicted RBP12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 SERPINB13Q9UIV8 391 aa12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 DCTN4Q9UJW0 460 aa12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 VSNL1P62760 191 aa12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 MYO1EQ12965 1108 aa12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 SUSD4Q5VX71 490 aa12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 PDXDC2PQ6P474 469 aa12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 PDIK1LQ8N165 341 aa12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 FGD4Q96M96 766 aa12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.77□□□□□ -0.37
PCDHA9-201ENST00000378122 TMEM259Q4ZIN3 620 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 SNX19Q92543 992 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 MS4A14Q96JA4 679 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 TTC26A0AVF1 554 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 IPO5O00410 1097 aaKnown RBP12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 NOP14P78316 857 aaKnown RBP12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 ZNF394Q53GI3 561 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 PODNQ7Z5L7 613 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 SCHIP1Q9P0W5 487 aaPredicted RBP12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 ZNF564Q8TBZ8 553 aaPredicted RBP12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 GGT7Q9UJ14 662 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 C2CD2LO14523 706 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 CPB1P15086 417 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 AP2B1P63010 937 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 RWDD4Q6NW29 188 aaKnown RBP12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 RPF1Q9H9Y2 349 aaKnown RBP12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 AK9Q5TCS8 1911 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 CCL15-CCL14A0A0B4J2E2 113 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 HAUS5O94927 633 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 RECQLP46063 649 aaPredicted RBP12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 GCLMP48507 274 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 GRAPQ13588 217 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 CCL15Q16663 113 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 ANGEL2Q5VTE6 544 aaKnown RBP12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 GRAPLQ8TC17 118 aaPredicted RBP12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 INTS2Q9H0H0 1204 aaKnown RBP12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 ARHGAP31Q2M1Z3 1444 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 TRIM66O15016 1216 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 KIF1CO43896 1103 aaKnown RBP12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 FGFR4P22455 802 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 SNRNP48Q6IEG0 339 aaKnown RBP12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 NBPF10Q6P3W6 841 aaKnown RBP12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 RASSF3Q86WH2 238 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 FBXL13Q8NEE6 735 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 OR6J1Q8NGC5 347 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 ZNF473Q8WTR7 871 aaKnown RBP12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 ANKRD7Q92527 254 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 LRRC37BQ96QE4 947 aa12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
PCDHA9-201ENST00000378122 MAP3K4Q9Y6R4 1608 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 TARSL2A2RTX5 802 aaKnown RBP12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 MAP3K13O43283 966 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 GH2P01242 217 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 STAT3P40763 770 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 ALCAMQ13740 583 aa12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 CAPRIN2Q6IMN6 1127 aaKnown RBP12.75□□□□□ -0.37
PCDHA9-201ENST00000378122 PSPC1Q8WXF1 523 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms