RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 PRKCIP41743 596 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 SESN3P58005 492 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 PPATQ06203 517 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 MTFR1Q15390 333 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 ZNF568Q3ZCX4 644 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 IRGCQ6NXR0 463 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 SMIM5Q71RC9 77 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 RBBP8NLQ8NC74 664 aaPredicted RBP16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 NRG4Q8WWG1 115 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 BICD1Q96G01 975 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 CEP63Q96MT8 703 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 ACSL3O95573 720 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 RARGP13631 454 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 VCAM1P19320 739 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 TAC1P20366 129 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 PON1P27169 355 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 TSNAXIP1Q2TAA8 658 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 MUM1Q2TAK8 710 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 CYP4X1Q8N118 509 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 AGGF1Q8N302 714 aaeCLIP16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 LRP5O75197 1615 aa16.86■□□□□ 0.29
CSNK1A1-202ENST00000377843 TSPY2A6NKD2 308 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 EPS15P42566 896 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 NPEPPSP55786 919 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 ACVR2BQ13705 512 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 NONOQ15233 471 aaKnown RBP eCLIP16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 FAM26FQ5R3K3 315 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 FOXR2Q6PJQ5 311 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 NEK8Q86SG6 692 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 VSIG1Q86XK7 387 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 PNMA1Q8ND90 353 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 TBCKQ8TEA7 893 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 ARHGEF26Q96DR7 871 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 MTMR9Q96QG7 549 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 SEC63Q9UGP8 760 aaKnown RBP16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 SPATA31A5Q5VU36 1347 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 SPATA31A7Q8IWB4 1347 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 CASZ1Q86V15 1759 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 COL1A1P02452 1464 aaPredicted RBP16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 NVLO15381 856 aaKnown RBP16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 SLC37A4O43826 429 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 CBX6O95503 412 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 HSPA1LP34931 641 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 RCN2Q14257 317 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 KHDC1Q4VXA5 237 aaKnown RBP16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 ZNF449Q6P9G9 518 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 RFWD3Q6PCD5 774 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 MAIP1Q8WWC4 291 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 SPOCK2Q92563 424 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 CARD9Q9H257 536 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 KCTD10Q9H3F6 313 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 AAASQ9NRG9 546 aa16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 BZW2Q9Y6E2 419 aaKnown RBP16.85■□□□□ 0.29
CSNK1A1-202ENST00000377843 NPHP3-ACAD11A0A0J9YXS1 232 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 EDIL3O43854 480 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 GOLGA8HP0CJ92 632 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 ABCB4P21439 1286 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 MARCKSL1P49006 195 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 RRP1BQ14684 758 aaKnown RBP16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 CROCCP2Q86T23 111 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 CDK5RAP3Q96JB5 506 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 CDC42EP4Q9H3Q1 356 aaKnown RBP16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 SIX2Q9NPC8 291 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 ATP8A2Q9NTI2 1148 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 TMEM260Q9NX78 707 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 HDAC9Q9UKV0 1011 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 USP20Q9Y2K6 914 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 PCDHA2Q9Y5H9 948 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 GOLGB1Q14789 3259 aaKnown RBP16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 PHF2O75151 1096 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 FAM163BP0C2L3 166 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 PCP11498 1178 aaKnown RBP16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 CETPP11597 493 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 BRAFP15056 766 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 LRRC23Q53EV4 343 aaPredicted RBP16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 INTS8Q75QN2 995 aaKnown RBP16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 SCFD1Q8WVM8 642 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 TRAPPC9Q96Q05 1148 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 POP1Q99575 1024 aaKnown RBP16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 PPP1R12CQ9BZL4 782 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 VCXQ9H320 206 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 CHCHD3Q9NX63 227 aaKnown RBP16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 MTRF1LQ9UGC7 380 aaKnown RBP16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 ZBTB1Q9Y2K1 713 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 TCRBV7S2A1N4TA0A589 114 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 TP73O15350 636 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 ATP9AO75110 1047 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 STX2P32856 288 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 POLGP54098 1239 aaPredicted RBP16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 GRM4Q14833 912 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 GALNT17Q6IS24 598 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 SNX29Q8TEQ0 813 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 KRT35Q92764 455 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 ART4Q93070 314 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 GJA10Q969M2 543 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 NAP1L3Q99457 506 aaPredicted RBP16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 METTL5Q9NRN9 209 aaKnown RBP16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 RASAL2Q9UJF2 1139 aa16.84■□□□□ 0.29
CSNK1A1-202ENST00000377843 COG5Q9UP83 839 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms