RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 LXNQ9BS40 222 aa22.04■■□□□ 1.12
CLN5-201ENST00000377453 LRRC37AA6NMS7 1700 aa22.04■■□□□ 1.12
CLN5-201ENST00000377453 GMNCA6NCL1 334 aa22.03■■□□□ 1.12
CLN5-201ENST00000377453 SLC26A4O43511 780 aa22.03■■□□□ 1.12
CLN5-201ENST00000377453 PPP3CAQ08209 521 aa22.03■■□□□ 1.12
CLN5-201ENST00000377453 FBXO25Q8TCJ0 367 aa22.03■■□□□ 1.12
CLN5-201ENST00000377453 CBWD1Q9BRT8 395 aa22.03■■□□□ 1.12
CLN5-201ENST00000377453 IDI2Q9BXS1 227 aa22.03■■□□□ 1.12
CLN5-201ENST00000377453 CTTNBP2NLQ9P2B4 639 aa22.03■■□□□ 1.12
CLN5-201ENST00000377453 ALG6Q9Y672 507 aa22.03■■□□□ 1.12
CLN5-201ENST00000377453 EIF3DO15371 548 aaKnown RBP eCLIP22.03■■□□□ 1.12
CLN5-201ENST00000377453 NPR1P16066 1061 aa22.03■■□□□ 1.12
CLN5-201ENST00000377453 PRELPP51888 382 aa22.03■■□□□ 1.12
CLN5-201ENST00000377453 ZNF577Q9BSK1 485 aa22.03■■□□□ 1.12
CLN5-201ENST00000377453 QSER1Q2KHR3 1735 aa22.03■■□□□ 1.12
CLN5-201ENST00000377453 FRMPD4Q14CM0 1322 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 GOLGA8IPA6NC78 632 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 GOLGA8JA6NMD2 632 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 K7ENM7 598 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 FTLP02792 175 aaPredicted RBP22.02■■□□□ 1.12
CLN5-201ENST00000377453 CYP3A4P08684 503 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 BFSP1Q12934 665 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 LMO3Q8TAP4 145 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 DMAC2Q9NW81 257 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 INTUQ9ULD6 942 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 SCAF8Q9UPN6 1271 aaKnown RBP22.02■■□□□ 1.12
CLN5-201ENST00000377453 ANKRD31Q8N7Z5 1873 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 ANKRD63C9JTQ0 380 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 TRAPPC3O43617 180 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 IBSPP21815 317 aaPredicted RBP22.02■■□□□ 1.12
CLN5-201ENST00000377453 SLCO1A2P46721 670 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 STAT2P52630 851 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 PTENP60484 403 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 MAPK7Q13164 816 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 BYSLQ13895 437 aaKnown RBP22.02■■□□□ 1.12
CLN5-201ENST00000377453 MESDQ14696 234 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 AOC3Q16853 763 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 TTC27Q6P3X3 843 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 PLEKHO2Q8TD55 490 aa22.02■■□□□ 1.12
CLN5-201ENST00000377453 RNF25Q96BH1 459 aaPredicted RBP22.02■■□□□ 1.12
CLN5-201ENST00000377453 MNAT1P51948 309 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 NPEPPSP55786 919 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 JAMLQ86YT9 394 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 RPUSD2Q8IZ73 545 aaKnown RBP22.01■■□□□ 1.11
CLN5-201ENST00000377453 CNPY4Q8N129 248 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 PCDHB18PQ96TA0 734 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 AGPAT1Q99943 283 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 GLIS2Q9BZE0 524 aaPredicted RBP22.01■■□□□ 1.11
CLN5-201ENST00000377453 TUFT1Q9NNX1 390 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 ZDHHC18Q9NUE0 388 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 PTPN22Q9Y2R2 807 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 DAAM1Q9Y4D1 1078 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 SCN9AQ15858 1988 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 NRXN2Q9P2S2 1712 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 A6NNZ2 444 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 MMP10P09238 476 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 TUBB8Q3ZCM7 444 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 DUPD1Q68J44 220 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 ZDHHC24Q6UX98 284 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 RUFY4Q6ZNE9 571 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 PRPF38AQ8NAV1 312 aaKnown RBP22.01■■□□□ 1.11
CLN5-201ENST00000377453 SEC14L1Q92503 715 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 SLC5A5Q92911 643 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 KIF13BQ9NQT8 1826 aa22.01■■□□□ 1.11
CLN5-201ENST00000377453 SGPL1O95470 568 aa22■■□□□ 1.11
CLN5-201ENST00000377453 VCAM1P19320 739 aa22■■□□□ 1.11
CLN5-201ENST00000377453 KCNJ1P48048 391 aa22■■□□□ 1.11
CLN5-201ENST00000377453 IFI35P80217 286 aaPredicted RBP22■■□□□ 1.11
CLN5-201ENST00000377453 NBPF9Q3BBW0 867 aa22■■□□□ 1.11
CLN5-201ENST00000377453 NSMFQ6X4W1 530 aa22■■□□□ 1.11
CLN5-201ENST00000377453 COL23A1Q86Y22 540 aaPredicted RBP22■■□□□ 1.11
CLN5-201ENST00000377453 CCDC13Q8IYE1 715 aa22■■□□□ 1.11
CLN5-201ENST00000377453 C1orf131Q8NDD1 294 aaKnown RBP22■■□□□ 1.11
CLN5-201ENST00000377453 POP1Q99575 1024 aaKnown RBP22■■□□□ 1.11
CLN5-201ENST00000377453 SELENOSQ9BQE4 189 aa22■■□□□ 1.11
CLN5-201ENST00000377453 ERP44Q9BS26 406 aa22■■□□□ 1.11
CLN5-201ENST00000377453 OSBPL7Q9BZF2 842 aa22■■□□□ 1.11
CLN5-201ENST00000377453 FAM114A2Q9NRY5 505 aa22■■□□□ 1.11
CLN5-201ENST00000377453 ARHGEF35A5YM69 484 aa22■■□□□ 1.11
CLN5-201ENST00000377453 POLR2MP0CAP2 368 aa22■■□□□ 1.11
CLN5-201ENST00000377453 FGFR4P22455 802 aa22■■□□□ 1.11
CLN5-201ENST00000377453 PPP2R5CQ13362 524 aa22■■□□□ 1.11
CLN5-201ENST00000377453 C6orf89Q6UWU4 347 aa22■■□□□ 1.11
CLN5-201ENST00000377453 ARFGAP2Q8N6H7 521 aa22■■□□□ 1.11
CLN5-201ENST00000377453 MTFR1LQ9H019 292 aa22■■□□□ 1.11
CLN5-201ENST00000377453 BRWD3Q6RI45 1802 aa22■■□□□ 1.11
CLN5-201ENST00000377453 BIRC3Q13489 604 aa21.99■■□□□ 1.11
CLN5-201ENST00000377453 MTMR3Q13615 1198 aa21.99■■□□□ 1.11
CLN5-201ENST00000377453 GRIPAP1Q4V328 841 aa21.99■■□□□ 1.11
CLN5-201ENST00000377453 CEP55Q53EZ4 464 aa21.99■■□□□ 1.11
CLN5-201ENST00000377453 PODNQ7Z5L7 613 aa21.99■■□□□ 1.11
CLN5-201ENST00000377453 EIF1ADQ8N9N8 165 aaKnown RBP21.99■■□□□ 1.11
CLN5-201ENST00000377453 PSMD1Q99460 953 aa21.99■■□□□ 1.11
CLN5-201ENST00000377453 TXLNGYQ9BZA5 131 aa21.99■■□□□ 1.11
CLN5-201ENST00000377453 GPRC5CQ9NQ84 441 aa21.99■■□□□ 1.11
CLN5-201ENST00000377453 DNM1LO00429 736 aa21.99■■□□□ 1.11
CLN5-201ENST00000377453 PPFIA2O75334 1257 aa21.99■■□□□ 1.11
CLN5-201ENST00000377453 CLSTN1O94985 981 aa21.99■■□□□ 1.11
CLN5-201ENST00000377453 RPL21P46778 160 aaKnown RBP21.99■■□□□ 1.11
CLN5-201ENST00000377453 PRELID2Q8N945 189 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms