RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 LBHD1Q9BQE6 289 aaPredicted RBP14.55□□□□□ -0.08
GPC6-201ENST00000377047 MTA3Q9BTC8 594 aa14.55□□□□□ -0.08
GPC6-201ENST00000377047 MTMR4Q9NYA4 1195 aa14.55□□□□□ -0.08
GPC6-201ENST00000377047 PALMO75781 387 aa14.55□□□□□ -0.08
GPC6-201ENST00000377047 GGPS1O95749 300 aa14.55□□□□□ -0.08
GPC6-201ENST00000377047 PRKCBP05771 671 aa14.55□□□□□ -0.08
GPC6-201ENST00000377047 MYOZ2Q9NPC6 264 aa14.55□□□□□ -0.08
GPC6-201ENST00000377047 LRRC53A6NM62 1247 aa14.55□□□□□ -0.08
GPC6-201ENST00000377047 CELF2O95319 508 aaKnown RBP14.55□□□□□ -0.08
GPC6-201ENST00000377047 CEP55Q53EZ4 464 aa14.55□□□□□ -0.08
GPC6-201ENST00000377047 SRBD1Q8N5C6 995 aaKnown RBP14.55□□□□□ -0.08
GPC6-201ENST00000377047 ZNF560Q96MR9 790 aa14.55□□□□□ -0.08
GPC6-201ENST00000377047 SP110Q9HB58 689 aa14.55□□□□□ -0.08
GPC6-201ENST00000377047 FARP1Q9Y4F1 1045 aaPredicted RBP14.55□□□□□ -0.08
GPC6-201ENST00000377047 UPP2O95045 317 aa14.55□□□□□ -0.08
GPC6-201ENST00000377047 CHEK2O96017 543 aa14.55□□□□□ -0.08
GPC6-201ENST00000377047 DRP2Q13474 957 aa14.55□□□□□ -0.08
GPC6-201ENST00000377047 CLEC10AQ8IUN9 316 aa14.55□□□□□ -0.08
GPC6-201ENST00000377047 GOLPH3LQ9H4A5 285 aa14.55□□□□□ -0.08
GPC6-201ENST00000377047 PAPOLAP51003 745 aaKnown RBP14.55□□□□□ -0.08
GPC6-201ENST00000377047 VPS39Q96JC1 886 aa14.55□□□□□ -0.08
GPC6-201ENST00000377047 LRRC7Q96NW7 1537 aa14.55□□□□□ -0.08
GPC6-201ENST00000377047 IQANK1A0A1B0GTG1 560 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 LGALS16A8MUM7 142 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 LCP1P13796 627 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 TFDP2Q14188 446 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 EZH2Q15910 746 aaKnown RBP14.54□□□□□ -0.08
GPC6-201ENST00000377047 KRT39Q6A163 491 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 FMO2Q99518 471 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 KATNAL1Q9BW62 490 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 KDM6AO15550 1401 aaPredicted RBP14.54□□□□□ -0.08
GPC6-201ENST00000377047 CCL15-CCL14A0A0B4J2E2 113 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 ZNF500O60304 480 aaPredicted RBP14.54□□□□□ -0.08
GPC6-201ENST00000377047 ZRANB2O95218 330 aaKnown RBP eCLIP14.54□□□□□ -0.08
GPC6-201ENST00000377047 NDUFB10O96000 172 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 GRIK1P39086 918 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 HUNKP57058 714 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 CCL15Q16663 113 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 KYAT1Q16773 422 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 TAF1BQ53T94 588 aaPredicted RBP14.54□□□□□ -0.08
GPC6-201ENST00000377047 STYK1Q6J9G0 422 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 NUP85Q9BW27 656 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 NPHP3-ACAD11A0A0J9YXS1 232 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 GFPT1Q06210 699 aaPredicted RBP14.54□□□□□ -0.08
GPC6-201ENST00000377047 DCAF4L1Q3SXM0 396 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 BTBD8Q5XKL5 378 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 ARHGEF40Q8TER5 1519 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 ENTPD3O75355 529 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 DUOXA2Q1HG44 320 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 N4BP2L2Q92802 583 aaPredicted RBP14.54□□□□□ -0.08
GPC6-201ENST00000377047 SPON2Q9BUD6 331 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 SIK2Q9H0K1 926 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 TRPC7Q9HCX4 862 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 SAYSD1Q9NPB0 183 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 RGL1Q9NZL6 768 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 GH1P01241 217 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 APOEP02649 317 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 RALAP11233 206 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 EFNA5P52803 228 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 HAUS6Q7Z4H7 955 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 MID2Q9UJV3 735 aa14.54□□□□□ -0.08
GPC6-201ENST00000377047 ACSL3O95573 720 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 TKFCQ3LXA3 575 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 LMBRD2Q68DH5 695 aaPredicted RBP14.53□□□□□ -0.08
GPC6-201ENST00000377047 TRIM68Q6AZZ1 485 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 ZNF746Q6NUN9 644 aaPredicted RBP14.53□□□□□ -0.08
GPC6-201ENST00000377047 ZMYND12Q9H0C1 365 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 KIF3CO14782 793 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 AP1B1Q10567 949 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 DRAP1Q14919 205 aaPredicted RBP14.53□□□□□ -0.08
GPC6-201ENST00000377047 ZSCAN26Q16670 478 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 EFHC2Q5JST6 749 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 CC2D1AQ6P1N0 951 aaPredicted RBP14.53□□□□□ -0.08
GPC6-201ENST00000377047 BARGINQ6ZT62 677 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 TUFT1Q9NNX1 390 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 LCMT1Q9UIC8 334 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 RASGRF2O14827 1237 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 OPHN1O60890 802 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 NCF2P19878 526 aaPredicted RBP14.53□□□□□ -0.08
GPC6-201ENST00000377047 TAC1P20366 129 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 ZNF543Q08ER8 600 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 ITPK1Q13572 414 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 ANGPTL8Q6UXH0 198 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 SPATA2LQ8IUW3 424 aaPredicted RBP14.53□□□□□ -0.08
GPC6-201ENST00000377047 CCDC197Q8NCU1 140 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 ZNF564Q8TBZ8 553 aaPredicted RBP14.53□□□□□ -0.08
GPC6-201ENST00000377047 TMEM143Q96AN5 459 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 USH1CQ9Y6N9 552 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 SPATA31A5Q5VU36 1347 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 SPATA31A7Q8IWB4 1347 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 TRIM49P0CI25 452 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 TRIM49CP0CI26 452 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 TMEM62Q0P6H9 643 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 SAMD7Q7Z3H4 446 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 RNF25Q96BH1 459 aaPredicted RBP14.53□□□□□ -0.08
GPC6-201ENST00000377047 EDEM3Q9BZQ6 932 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 TMEM39BQ9GZU3 492 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 Q9H521 79 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 GOLGA8MH3BSY2 632 aa14.53□□□□□ -0.08
GPC6-201ENST00000377047 SNX2O60749 519 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms