RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 NT5C1B-RDH14C9J2C7 533 aa20.69■□□□□ 0.9
HDAC6-202ENST00000376610 P4HBP07237 508 aaKnown RBP20.69■□□□□ 0.9
HDAC6-202ENST00000376610 SCRN1Q12765 414 aa20.69■□□□□ 0.9
HDAC6-202ENST00000376610 BMP8AQ7Z5Y6 402 aa20.69■□□□□ 0.9
HDAC6-202ENST00000376610 WASF1Q92558 559 aa20.69■□□□□ 0.9
HDAC6-202ENST00000376610 CEP170P1Q96L14 293 aa20.69■□□□□ 0.9
HDAC6-202ENST00000376610 FAM105AQ9NUU6 356 aa20.69■□□□□ 0.9
HDAC6-202ENST00000376610 INPP5FQ9Y2H2 1132 aa20.69■□□□□ 0.9
HDAC6-202ENST00000376610 NR2E1Q9Y466 385 aa20.69■□□□□ 0.9
HDAC6-202ENST00000376610 COL4A3BPQ9Y5P4 624 aa20.69■□□□□ 0.9
HDAC6-202ENST00000376610 EML1O00423 815 aa20.68■□□□□ 0.9
HDAC6-202ENST00000376610 TBX3O15119 743 aa20.68■□□□□ 0.9
HDAC6-202ENST00000376610 RFC5P40937 340 aa20.68■□□□□ 0.9
HDAC6-202ENST00000376610 ITIH3Q06033 890 aa20.68■□□□□ 0.9
HDAC6-202ENST00000376610 GIT2Q14161 759 aa20.68■□□□□ 0.9
HDAC6-202ENST00000376610 LONRF3Q496Y0 759 aa20.68■□□□□ 0.9
HDAC6-202ENST00000376610 NOMO2Q5JPE7 1267 aa20.68■□□□□ 0.9
HDAC6-202ENST00000376610 SYCE2Q6PIF2 218 aa20.68■□□□□ 0.9
HDAC6-202ENST00000376610 PIK3AP1Q6ZUJ8 805 aa20.68■□□□□ 0.9
HDAC6-202ENST00000376610 OTUD6AQ7L8S5 288 aa20.68■□□□□ 0.9
HDAC6-202ENST00000376610 ALYREFQ86V81 257 aaKnown RBP20.68■□□□□ 0.9
HDAC6-202ENST00000376610 KSR1Q8IVT5 923 aa20.68■□□□□ 0.9
HDAC6-202ENST00000376610 URGCPQ8TCY9 931 aa20.68■□□□□ 0.9
HDAC6-202ENST00000376610 PSPC1Q8WXF1 523 aaKnown RBP20.68■□□□□ 0.9
HDAC6-202ENST00000376610 LPPQ93052 612 aa20.68■□□□□ 0.9
HDAC6-202ENST00000376610 NECTIN4Q96NY8 510 aa20.68■□□□□ 0.9
HDAC6-202ENST00000376610 BRMS1Q9HCU9 246 aa20.68■□□□□ 0.9
HDAC6-202ENST00000376610 VAV3Q9UKW4 847 aa20.68■□□□□ 0.9
HDAC6-202ENST00000376610 HCFC2Q9Y5Z7 792 aa20.68■□□□□ 0.9
HDAC6-202ENST00000376610 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.67■□□□□ 0.9
HDAC6-202ENST00000376610 ZNF623O75123 536 aa20.67■□□□□ 0.9
HDAC6-202ENST00000376610 BAG4O95429 457 aaKnown RBP20.67■□□□□ 0.9
HDAC6-202ENST00000376610 CXCL14O95715 111 aa20.67■□□□□ 0.9
HDAC6-202ENST00000376610 NEFLP07196 543 aa20.67■□□□□ 0.9
HDAC6-202ENST00000376610 NPEPPSP55786 919 aa20.67■□□□□ 0.9
HDAC6-202ENST00000376610 NHLH1Q02575 133 aa20.67■□□□□ 0.9
HDAC6-202ENST00000376610 SIGLEC14Q08ET2 396 aa20.67■□□□□ 0.9
HDAC6-202ENST00000376610 ANKRD1Q15327 319 aa20.67■□□□□ 0.9
HDAC6-202ENST00000376610 SLFN12Q8IYM2 578 aa20.67■□□□□ 0.9
HDAC6-202ENST00000376610 VPS52Q8N1B4 723 aa20.67■□□□□ 0.9
HDAC6-202ENST00000376610 TCP11Q8WWU5 503 aa20.67■□□□□ 0.9
HDAC6-202ENST00000376610 LXNQ9BS40 222 aa20.67■□□□□ 0.9
HDAC6-202ENST00000376610 GBP3Q9H0R5 595 aa20.67■□□□□ 0.9
HDAC6-202ENST00000376610 TSHZ2Q9NRE2 1034 aa20.67■□□□□ 0.9
HDAC6-202ENST00000376610 TBC1D13Q9NVG8 400 aa20.67■□□□□ 0.9
HDAC6-202ENST00000376610 GAS2O43903 313 aaKnown RBP20.66■□□□□ 0.9
HDAC6-202ENST00000376610 PFKFB2O60825 505 aa20.66■□□□□ 0.9
HDAC6-202ENST00000376610 CLASP2O75122 1294 aaKnown RBP20.66■□□□□ 0.9
HDAC6-202ENST00000376610 EPHA7Q15375 998 aa20.66■□□□□ 0.9
HDAC6-202ENST00000376610 SRGAP1Q7Z6B7 1085 aa20.66■□□□□ 0.9
HDAC6-202ENST00000376610 IGSF21Q96ID5 467 aa20.66■□□□□ 0.9
HDAC6-202ENST00000376610 RIPOR3Q96MK2 946 aa20.66■□□□□ 0.9
HDAC6-202ENST00000376610 PRRX2Q99811 253 aa20.66■□□□□ 0.9
HDAC6-202ENST00000376610 IFT122Q9HBG6 1241 aa20.66■□□□□ 0.9
HDAC6-202ENST00000376610 AGPAT5Q9NUQ2 364 aa20.66■□□□□ 0.9
HDAC6-202ENST00000376610 DZANK1Q9NVP4 752 aa20.66■□□□□ 0.9
HDAC6-202ENST00000376610 STK39Q9UEW8 545 aa20.66■□□□□ 0.9
HDAC6-202ENST00000376610 PCDHB2Q9Y5E7 798 aa20.66■□□□□ 0.9
HDAC6-202ENST00000376610 ASAP2O43150 1006 aa20.65■□□□□ 0.9
HDAC6-202ENST00000376610 SRGAP2CP0DJJ0 459 aa20.65■□□□□ 0.9
HDAC6-202ENST00000376610 SP100P23497 879 aaPredicted RBP20.65■□□□□ 0.9
HDAC6-202ENST00000376610 YWHABP31946 246 aaKnown RBP20.65■□□□□ 0.9
HDAC6-202ENST00000376610 MTHFRP42898 656 aa20.65■□□□□ 0.9
HDAC6-202ENST00000376610 PTPN21Q16825 1174 aa20.65■□□□□ 0.9
HDAC6-202ENST00000376610 NCAPH2Q6IBW4 605 aa20.65■□□□□ 0.9
HDAC6-202ENST00000376610 DDX53Q86TM3 631 aaKnown RBP20.65■□□□□ 0.9
HDAC6-202ENST00000376610 C4orf19Q8IY42 314 aa20.65■□□□□ 0.9
HDAC6-202ENST00000376610 PRPF31Q8WWY3 499 aaKnown RBP20.65■□□□□ 0.9
HDAC6-202ENST00000376610 TMEM143Q96AN5 459 aa20.65■□□□□ 0.9
HDAC6-202ENST00000376610 FAM193BQ96PV7 902 aaPredicted RBP20.65■□□□□ 0.9
HDAC6-202ENST00000376610 ZBP1Q9H171 429 aa20.65■□□□□ 0.9
HDAC6-202ENST00000376610 ADAM7Q9H2U9 754 aa20.65■□□□□ 0.9
HDAC6-202ENST00000376610 DHX33Q9H6R0 707 aaKnown RBP20.65■□□□□ 0.9
HDAC6-202ENST00000376610 ZSWIM4Q9H7M6 989 aa20.65■□□□□ 0.9
HDAC6-202ENST00000376610 CNTNAP2Q9UHC6 1331 aa20.64■□□□□ 0.89
HDAC6-202ENST00000376610 OFD1O75665 1012 aa20.64■□□□□ 0.89
HDAC6-202ENST00000376610 CTSAP10619 480 aa20.64■□□□□ 0.89
HDAC6-202ENST00000376610 LAMTOR4Q0VGL1 99 aa20.64■□□□□ 0.89
HDAC6-202ENST00000376610 EMC2Q15006 297 aa20.64■□□□□ 0.89
HDAC6-202ENST00000376610 XKR9Q5GH70 373 aa20.64■□□□□ 0.89
HDAC6-202ENST00000376610 POTEDQ86YR6 584 aa20.64■□□□□ 0.89
HDAC6-202ENST00000376610 FBXL6Q8N531 539 aa20.64■□□□□ 0.89
HDAC6-202ENST00000376610 NRDE2Q9H7Z3 1164 aa20.64■□□□□ 0.89
HDAC6-202ENST00000376610 BMP2KQ9NSY1 1161 aaPredicted RBP20.64■□□□□ 0.89
HDAC6-202ENST00000376610 KANSL3Q9P2N6 904 aa20.64■□□□□ 0.89
HDAC6-202ENST00000376610 ORC3Q9UBD5 711 aaPredicted RBP20.64■□□□□ 0.89
HDAC6-202ENST00000376610 TPCN1Q9ULQ1 816 aa20.64■□□□□ 0.89
HDAC6-202ENST00000376610 IRAK3Q9Y616 596 aa20.64■□□□□ 0.89
HDAC6-202ENST00000376610 SPDYE4A6NLX3 237 aa20.63■□□□□ 0.89
HDAC6-202ENST00000376610 ERLIN2O94905 339 aa20.63■□□□□ 0.89
HDAC6-202ENST00000376610 GALTP07902 379 aa20.63■□□□□ 0.89
HDAC6-202ENST00000376610 KRT2P35908 639 aa20.63■□□□□ 0.89
HDAC6-202ENST00000376610 MRE11P49959 708 aa20.63■□□□□ 0.89
HDAC6-202ENST00000376610 ANAPC15P60006 121 aa20.63■□□□□ 0.89
HDAC6-202ENST00000376610 NCBP1Q09161 790 aaKnown RBP20.63■□□□□ 0.89
HDAC6-202ENST00000376610 PPFIBP1Q86W92 1011 aa20.63■□□□□ 0.89
HDAC6-202ENST00000376610 TMEM173Q86WV6 379 aaPredicted RBP20.63■□□□□ 0.89
HDAC6-202ENST00000376610 OXER1Q8TDS5 423 aa20.63■□□□□ 0.89
HDAC6-202ENST00000376610 HAS1Q92839 578 aa20.63■□□□□ 0.89
HDAC6-202ENST00000376610 CCDC43Q96MW1 224 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms