RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 PARK7Q99497 189 aaKnown RBP16.33■□□□□ 0.2
CCHCR1-201ENST00000376266 ISCUQ9H1K1 167 aa16.33■□□□□ 0.2
CCHCR1-201ENST00000376266 HOMER2Q9NSB8 354 aa16.33■□□□□ 0.2
CCHCR1-201ENST00000376266 SPATS2LQ9NUQ6 558 aaKnown RBP16.33■□□□□ 0.2
CCHCR1-201ENST00000376266 CCT8L1PA6NM43 557 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 NKRFO15226 690 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 CNMDO75829 334 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 CLTAP09496 248 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 TAF1CQ15572 869 aaPredicted RBP16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 UAP1Q16222 522 aaPredicted RBP16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 SNRNP48Q6IEG0 339 aaKnown RBP16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 CCDC63Q8NA47 563 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 KIF9Q9HAQ2 790 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 ADAMTS3O15072 1205 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 ALAS1P13196 640 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 STAT3P40763 770 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 Q3C1V9 767 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 AGBL2Q5U5Z8 902 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 LMBR1Q8WVP7 490 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 CCDC47Q96A33 483 aaKnown RBP16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 EBF2Q9HAK2 575 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 PP2D1A8MPX8 630 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 PAEPP09466 180 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 DRD4P21917 467 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 UBA7P41226 1012 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 MAGOHP61326 146 aaKnown RBP16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 ERVK-9P63128 1117 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 EHHADHQ08426 723 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 PDE4DQ08499 809 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 TDRD12Q587J7 1177 aaKnown RBP16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 CCDC197Q8NCU1 140 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 MAGOHBQ96A72 148 aaKnown RBP16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 TEX13BQ9BXU2 312 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 SH3GLB2Q9NR46 395 aa16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 PACSIN2Q9UNF0 486 aaPredicted RBP16.32■□□□□ 0.2
CCHCR1-201ENST00000376266 SMCO2A6NFE2 343 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 hCG_1984214I3L0E3 225 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 ANP32DO95626 131 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 MYL1P05976 194 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 PEX19P40855 299 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 MAP2K1Q02750 393 aaPredicted RBP16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 ZNF713Q8N859 430 aaPredicted RBP16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 SPATC1LQ9H0A9 340 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 SIK3Q9Y2K2 1263 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 C15orf41Q9Y2V0 281 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 RABGAP1Q9Y3P9 1069 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 ATP2A1O14983 1001 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 OAZ1P54368 228 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 CUL1Q13616 776 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 VWA3BQ502W6 1294 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 CRELD2Q6UXH1 353 aaPredicted RBP16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 CACNA2D4Q7Z3S7 1137 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 DDX42Q86XP3 938 aaKnown RBP eCLIP16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 ANKS4BQ8N8V4 417 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 USP38Q8NB14 1042 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 SPAG5Q96R06 1193 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 NDST4Q9H3R1 872 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 R3HDMLQ9H3Y0 253 aa16.31■□□□□ 0.2
CCHCR1-201ENST00000376266 DTHD1Q6ZMT9 781 aa16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 CHMP6Q96FZ7 201 aa16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 INPP4AQ96PE3 977 aaPredicted RBP16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 ZMYND12Q9H0C1 365 aa16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.3■□□□□ 0.25e-30■■■■■ 28.6
CCHCR1-201ENST00000376266 CPA4Q9UI42 421 aa16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 FBXL5Q9UKA1 691 aa16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 TRPC6Q9Y210 931 aa16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 L3MBTL1Q9Y468 752 aa16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 A0A0G2JMZ2 1700 aa16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 DCDC2CA8MYV0 355 aa16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 STK4Q13043 487 aa16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 CRHR2Q13324 411 aa16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 BZW1Q7L1Q6 419 aaKnown RBP16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 TBC1D1Q86TI0 1168 aaPredicted RBP16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 TBC1D5Q92609 795 aa16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 TAF4BQ92750 862 aa16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 SAAL1Q96ER3 474 aa16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 PSTPIP2Q9H939 334 aa16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 KBTBD4Q9NVX7 518 aa16.3■□□□□ 0.2
CCHCR1-201ENST00000376266 NFIBO00712 420 aa16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 MYBP10242 640 aa16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 GCLCP48506 637 aaPredicted RBP16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 SF3A3Q12874 501 aaKnown RBP eCLIP16.29■□□□□ 0.22e-6■■□□□ 13.6
CCHCR1-201ENST00000376266 SEMA3FQ13275 785 aa16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 MTMR3Q13615 1198 aa16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 ASTE1Q2TB18 679 aaPredicted RBP16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 KRT71Q3SY84 523 aa16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 MEI1Q5TIA1 1274 aa16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 C4orf32Q8N8J7 132 aa16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 EIF1ADQ8N9N8 165 aaKnown RBP16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 SH3GL3Q99963 347 aa16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 MOV10L1Q9BXT6 1211 aaKnown RBP16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 MRPL11Q9Y3B7 192 aaKnown RBP16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 ABCB11O95342 1321 aa16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 EME2A4GXA9 379 aaPredicted RBP16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 ECHS1P30084 290 aa16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 TRAF1Q13077 416 aa16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 CAPRIN2Q6IMN6 1127 aaKnown RBP16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 MDM1Q8TC05 714 aa16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 CCHCR1Q8TD31 782 aa16.29■□□□□ 0.2
CCHCR1-201ENST00000376266 RASGRP4Q8TDF6 673 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms