RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 RPP25Q9BUL9 199 aaKnown RBP12.37□□□□□ -0.43
DDX39B-201ENST00000376177 PCDHA6Q9UN73 950 aa12.37□□□□□ -0.43
DDX39B-201ENST00000376177 PCDHA8Q9Y5H6 950 aa12.37□□□□□ -0.43
DDX39B-201ENST00000376177 ATP6V1DQ9Y5K8 247 aa12.37□□□□□ -0.43
DDX39B-201ENST00000376177 ATRXP46100 2492 aa12.36□□□□□ -0.43
DDX39B-201ENST00000376177 WDFY3Q8IZQ1 3526 aa12.36□□□□□ -0.43
DDX39B-201ENST00000376177 HBP1O60381 514 aa12.36□□□□□ -0.43
DDX39B-201ENST00000376177 RFPL2O75678 378 aa12.36□□□□□ -0.43
DDX39B-201ENST00000376177 ATG7O95352 703 aa12.36□□□□□ -0.43
DDX39B-201ENST00000376177 PLEKHA8P1O95397 391 aa12.36□□□□□ -0.43
DDX39B-201ENST00000376177 ALDH7A1P49419 539 aaKnown RBP12.36□□□□□ -0.43
DDX39B-201ENST00000376177 NLRP11P59045 1033 aaKnown RBP12.36□□□□□ -0.43
DDX39B-201ENST00000376177 COL9A3Q14050 684 aaPredicted RBP12.36□□□□□ -0.43
DDX39B-201ENST00000376177 TSSK4Q6SA08 328 aa12.36□□□□□ -0.43
DDX39B-201ENST00000376177 DDX53Q86TM3 631 aaKnown RBP12.36□□□□□ -0.43
DDX39B-201ENST00000376177 METTL13Q8N6R0 699 aa12.36□□□□□ -0.43
DDX39B-201ENST00000376177 ESYT1Q9BSJ8 1104 aa12.36□□□□□ -0.43
DDX39B-201ENST00000376177 ADAMTS10Q9H324 1103 aa12.36□□□□□ -0.43
DDX39B-201ENST00000376177 NRDE2Q9H7Z3 1164 aa12.36□□□□□ -0.43
DDX39B-201ENST00000376177 CNNM2Q9H8M5 875 aa12.36□□□□□ -0.43
DDX39B-201ENST00000376177 PSTPIP2Q9H939 334 aa12.36□□□□□ -0.43
DDX39B-201ENST00000376177 AGO4Q9HCK5 861 aaKnown RBP12.36□□□□□ -0.43
DDX39B-201ENST00000376177 ZKSCAN5Q9Y2L8 839 aa12.36□□□□□ -0.43
DDX39B-201ENST00000376177 RALGAPA1Q6GYQ0 2036 aa12.35□□□□□ -0.43
DDX39B-201ENST00000376177 CLUHO75153 1309 aa12.35□□□□□ -0.43
DDX39B-201ENST00000376177 NFASCO94856 1347 aa12.35□□□□□ -0.43
DDX39B-201ENST00000376177 IFIT3O14879 490 aaKnown RBP12.35□□□□□ -0.43
DDX39B-201ENST00000376177 GALTP07902 379 aa12.35□□□□□ -0.43
DDX39B-201ENST00000376177 KLRC2P26717 231 aa12.35□□□□□ -0.43
DDX39B-201ENST00000376177 SLC11A1P49279 550 aa12.35□□□□□ -0.43
DDX39B-201ENST00000376177 NT5C2P49902 561 aa12.35□□□□□ -0.43
DDX39B-201ENST00000376177 CSTF1Q05048 431 aaKnown RBP12.35□□□□□ -0.43
DDX39B-201ENST00000376177 ODR4Q5SWX8 454 aa12.35□□□□□ -0.43
DDX39B-201ENST00000376177 DCLRE1AQ6PJP8 1040 aa12.35□□□□□ -0.43
DDX39B-201ENST00000376177 ABHD15Q6UXT9 468 aa12.35□□□□□ -0.43
DDX39B-201ENST00000376177 LRRC71Q8N4P6 559 aa12.35□□□□□ -0.43
DDX39B-201ENST00000376177 MXRA8Q9BRK3 442 aa12.35□□□□□ -0.43
DDX39B-201ENST00000376177 DSCC1Q9BVC3 393 aa12.35□□□□□ -0.43
DDX39B-201ENST00000376177 GBP3Q9H0R5 595 aa12.35□□□□□ -0.43
DDX39B-201ENST00000376177 MAN1C1Q9NR34 630 aa12.35□□□□□ -0.43
DDX39B-201ENST00000376177 FOXD4L1Q9NU39 408 aa12.35□□□□□ -0.43
DDX39B-201ENST00000376177 USP18Q9UMW8 372 aa12.35□□□□□ -0.43
DDX39B-201ENST00000376177 SMG5Q9UPR3 1016 aaKnown RBP12.35□□□□□ -0.43
DDX39B-201ENST00000376177 COL1A2P08123 1366 aa12.34□□□□□ -0.43
DDX39B-201ENST00000376177 A0A0U1RQF3 1178 aa12.34□□□□□ -0.43
DDX39B-201ENST00000376177 CCDC195A0A1B0GUA6 201 aa12.34□□□□□ -0.43
DDX39B-201ENST00000376177 BACH1O14867 736 aa12.34□□□□□ -0.43
DDX39B-201ENST00000376177 LILRB3O75022 631 aa12.34□□□□□ -0.43
DDX39B-201ENST00000376177 PRPF40AO75400 957 aaKnown RBP12.34□□□□□ -0.43
DDX39B-201ENST00000376177 PPM1JQ5JR12 505 aa12.34□□□□□ -0.43
DDX39B-201ENST00000376177 ZNF280BQ86YH2 543 aa12.34□□□□□ -0.43
DDX39B-201ENST00000376177 SRBD1Q8N5C6 995 aaKnown RBP12.34□□□□□ -0.43
DDX39B-201ENST00000376177 RRP36Q96EU6 259 aaKnown RBP12.34□□□□□ -0.43
DDX39B-201ENST00000376177 TMX3Q96JJ7 454 aa12.34□□□□□ -0.43
DDX39B-201ENST00000376177 SDF4Q9BRK5 362 aa12.34□□□□□ -0.43
DDX39B-201ENST00000376177 WDR6Q9NNW5 1121 aaKnown RBP12.34□□□□□ -0.43
DDX39B-201ENST00000376177 TBC1D13Q9NVG8 400 aa12.34□□□□□ -0.43
DDX39B-201ENST00000376177 SPATA6Q9NWH7 488 aaPredicted RBP12.34□□□□□ -0.43
DDX39B-201ENST00000376177 EPS15L1Q9UBC2 864 aa12.34□□□□□ -0.43
DDX39B-201ENST00000376177 INPP5FQ9Y2H2 1132 aa12.34□□□□□ -0.43
DDX39B-201ENST00000376177 LAMA1P25391 3075 aa12.34□□□□□ -0.43
DDX39B-201ENST00000376177 NBEAQ8NFP9 2946 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 C2CD2LO14523 706 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 SPATA31D3P0C874 917 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 ZSCAN20P17040 1043 aaPredicted RBP12.33□□□□□ -0.44
DDX39B-201ENST00000376177 CD72P21854 359 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 AFF1P51825 1210 aaKnown RBP12.33□□□□□ -0.44
DDX39B-201ENST00000376177 NEK4P51957 841 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 POLGP54098 1239 aaPredicted RBP12.33□□□□□ -0.44
DDX39B-201ENST00000376177 ANTXR2P58335 489 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 SNW1Q13573 536 aaKnown RBP12.33□□□□□ -0.44
DDX39B-201ENST00000376177 LPAL2Q16609 132 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 ZNF484Q5JVG2 852 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 SWSAP1Q6NVH7 229 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 PDXDC2PQ6P474 469 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 C15orf39Q6ZRI6 1047 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 SPATA31D4Q6ZUB0 917 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 TAS1R1Q7RTX1 841 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 RAB11FIP4Q86YS3 637 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 LINC01465Q8N7H1 131 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 ZNF707Q96C28 371 aaPredicted RBP12.33□□□□□ -0.44
DDX39B-201ENST00000376177 RTKNQ9BST9 563 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 SPZ1Q9BXG8 430 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 ZNF302Q9NR11 478 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 AKT3Q9Y243 479 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.33□□□□□ -0.44
DDX39B-201ENST00000376177 NUMBLQ9Y6R0 609 aa12.33□□□□□ -0.44
DDX39B-201ENST00000376177 INPPL1O15357 1258 aa12.32□□□□□ -0.44
DDX39B-201ENST00000376177 TPM3P06753 285 aa12.32□□□□□ -0.44
DDX39B-201ENST00000376177 RXRAP19793 462 aa12.32□□□□□ -0.44
DDX39B-201ENST00000376177 EIF4BP23588 611 aaKnown RBP12.32□□□□□ -0.44
DDX39B-201ENST00000376177 GPC5P78333 572 aa12.32□□□□□ -0.44
DDX39B-201ENST00000376177 LMNB2Q03252 620 aa12.32□□□□□ -0.44
DDX39B-201ENST00000376177 HTR4Q13639 388 aa12.32□□□□□ -0.44
DDX39B-201ENST00000376177 GET4Q7L5D6 327 aaPredicted RBP12.32□□□□□ -0.44
DDX39B-201ENST00000376177 PPFIBP1Q86W92 1011 aa12.32□□□□□ -0.44
DDX39B-201ENST00000376177 BBXQ8WY36 941 aaPredicted RBP12.32□□□□□ -0.44
DDX39B-201ENST00000376177 MRPL9Q9BYD2 267 aaKnown RBP12.32□□□□□ -0.44
DDX39B-201ENST00000376177 TSPY26PQ9H489 355 aa12.32□□□□□ -0.44
DDX39B-201ENST00000376177 SPDYE3A6NKU9 549 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms