RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 ATP1A1P05023 1023 aaKnown RBP14.58□□□□□ -0.08
C9orf47-203ENST00000375851 GNA15P30679 374 aa14.58□□□□□ -0.08
C9orf47-203ENST00000375851 ENOSF1Q7L5Y1 443 aa14.58□□□□□ -0.08
C9orf47-203ENST00000375851 RFFLQ8WZ73 363 aa14.58□□□□□ -0.08
C9orf47-203ENST00000375851 PLAAQ9Y263 795 aa14.58□□□□□ -0.08
C9orf47-203ENST00000375851 KDM6AO15550 1401 aaPredicted RBP14.58□□□□□ -0.08
C9orf47-203ENST00000375851 UBE4BO95155 1302 aa14.58□□□□□ -0.08
C9orf47-203ENST00000375851 MAP2P11137 1827 aaKnown RBP14.58□□□□□ -0.08
C9orf47-203ENST00000375851 CA4P22748 312 aa14.58□□□□□ -0.08
C9orf47-203ENST00000375851 KCNJ6P48051 423 aa14.58□□□□□ -0.08
C9orf47-203ENST00000375851 TFDP2Q14188 446 aa14.58□□□□□ -0.08
C9orf47-203ENST00000375851 VCXQ9H320 206 aa14.58□□□□□ -0.08
C9orf47-203ENST00000375851 CPSF3Q9UKF6 684 aaKnown RBP14.58□□□□□ -0.08
C9orf47-203ENST00000375851 STRIP2Q9ULQ0 834 aa14.58□□□□□ -0.08
C9orf47-203ENST00000375851 GPC4O75487 556 aa14.58□□□□□ -0.08
C9orf47-203ENST00000375851 DGAT1O75907 488 aa14.58□□□□□ -0.08
C9orf47-203ENST00000375851 GNAT1P11488 350 aa14.58□□□□□ -0.08
C9orf47-203ENST00000375851 CLNS1AP54105 237 aaKnown RBP14.58□□□□□ -0.08
C9orf47-203ENST00000375851 ZNF280CQ8ND82 737 aa14.58□□□□□ -0.08
C9orf47-203ENST00000375851 TMEM39BQ9GZU3 492 aa14.58□□□□□ -0.08
C9orf47-203ENST00000375851 MAD2L2Q9UI95 211 aa14.58□□□□□ -0.08
C9orf47-203ENST00000375851 MRFAP1Q9Y605 127 aa14.58□□□□□ -0.08
C9orf47-203ENST00000375851 ADCY2Q08462 1091 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 PTPAQ15257 358 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 XKR3Q5GH77 459 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 RBM46Q8TBY0 533 aaKnown RBP14.57□□□□□ -0.08
C9orf47-203ENST00000375851 SCAF8Q9UPN6 1271 aaKnown RBP14.57□□□□□ -0.08
C9orf47-203ENST00000375851 PCGF5Q86SE9 256 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 GSPT2Q8IYD1 628 aaKnown RBP14.57□□□□□ -0.08
C9orf47-203ENST00000375851 RNF149Q8NC42 400 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 CFAP61Q8NHU2 1237 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.57□□□□□ -0.08
C9orf47-203ENST00000375851 SART1O43290 800 aaKnown RBP14.57□□□□□ -0.08
C9orf47-203ENST00000375851 HUS1O60921 280 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 GYS1P13807 737 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 GYS2P54840 703 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 CASP7P55210 303 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 DUOXA2Q1HG44 320 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 ARL13BQ3SXY8 428 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 LMBRD2Q68DH5 695 aaPredicted RBP14.57□□□□□ -0.08
C9orf47-203ENST00000375851 STYK1Q6J9G0 422 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 TRIM42Q8IWZ5 723 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 TC2NQ8N9U0 490 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 CALR3Q96L12 384 aaKnown RBP14.57□□□□□ -0.08
C9orf47-203ENST00000375851 NUF2Q9BZD4 464 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 GINM1Q9NU53 330 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 C19orf81C9J6K1 198 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 MYCP01106 439 aaPredicted RBP14.57□□□□□ -0.08
C9orf47-203ENST00000375851 RPA1P27694 616 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 ASPHQ12797 758 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 BZW1Q7L1Q6 419 aaKnown RBP14.57□□□□□ -0.08
C9orf47-203ENST00000375851 POLLQ9UGP5 575 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 ADAM21Q9UKJ8 722 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 ITIH6Q6UXX5 1313 aa14.57□□□□□ -0.08
C9orf47-203ENST00000375851 TYW5A2RUC4 315 aaKnown RBP14.56□□□□□ -0.08
C9orf47-203ENST00000375851 EDRF1Q3B7T1 1238 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 PHLDB3Q6NSJ2 640 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 FASTKD5Q7L8L6 764 aaKnown RBP14.56□□□□□ -0.08
C9orf47-203ENST00000375851 TTC13Q8NBP0 860 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 SAYSD1Q9NPB0 183 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 PCSK1NQ9UHG2 260 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 ITSN1Q15811 1721 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 TXNP10599 105 aaKnown RBP14.56□□□□□ -0.08
C9orf47-203ENST00000375851 HDLBPQ00341 1268 aaKnown RBP14.56□□□□□ -0.08
C9orf47-203ENST00000375851 MCUQ8NE86 351 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 BEST2Q8NFU1 509 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.56□□□□□ -0.08
C9orf47-203ENST00000375851 NCAPGQ9BPX3 1015 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 ASNSD1Q9NWL6 643 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 ATP8B3O60423 1300 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 SLC16A3O15427 465 aaKnown RBP14.56□□□□□ -0.08
C9orf47-203ENST00000375851 COPB2P35606 906 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 FXR2P51116 673 aaKnown RBP eCLIP14.56□□□□□ -0.08
C9orf47-203ENST00000375851 EFNA5P52803 228 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 PSMC1P62191 440 aaKnown RBP14.56□□□□□ -0.08
C9orf47-203ENST00000375851 SLC18A3Q16572 532 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 PRAMEF18Q5VWM3 479 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 SPATA4Q8NEY3 305 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 TIPINQ9BVW5 301 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 HSPBP1Q9NZL4 362 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 TMEM131LA2VDJ0 1609 aa14.56□□□□□ -0.08
C9orf47-203ENST00000375851 SSU72P8A0A1W2PR75 194 aa14.55□□□□□ -0.08
C9orf47-203ENST00000375851 CYP26A1O43174 497 aa14.55□□□□□ -0.08
C9orf47-203ENST00000375851 GGPS1O95749 300 aa14.55□□□□□ -0.08
C9orf47-203ENST00000375851 UCHL3P15374 230 aa14.55□□□□□ -0.08
C9orf47-203ENST00000375851 NFIAQ12857 509 aa14.55□□□□□ -0.08
C9orf47-203ENST00000375851 MAP3K21Q5TCX8 1036 aa14.55□□□□□ -0.08
C9orf47-203ENST00000375851 ANGEL2Q5VTE6 544 aaKnown RBP14.55□□□□□ -0.08
C9orf47-203ENST00000375851 PXDNQ92626 1479 aa14.55□□□□□ -0.08
C9orf47-203ENST00000375851 ELP3Q9H9T3 547 aa14.55□□□□□ -0.08
C9orf47-203ENST00000375851 TLK1Q9UKI8 766 aa14.55□□□□□ -0.08
C9orf47-203ENST00000375851 PFASO15067 1338 aa14.55□□□□□ -0.08
C9orf47-203ENST00000375851 PLCB4Q15147 1175 aa14.55□□□□□ -0.08
C9orf47-203ENST00000375851 AGPAT1Q99943 283 aa14.55□□□□□ -0.08
C9orf47-203ENST00000375851 INPP5FQ9Y2H2 1132 aa14.55□□□□□ -0.08
C9orf47-203ENST00000375851 ASB14A6NK59 587 aa14.55□□□□□ -0.08
C9orf47-203ENST00000375851 RASGRP2Q7LDG7 609 aa14.55□□□□□ -0.08
C9orf47-203ENST00000375851 DCLK2Q8N568 766 aa14.55□□□□□ -0.08
C9orf47-203ENST00000375851 FAM217BQ9NTX9 383 aaPredicted RBP14.55□□□□□ -0.08
C9orf47-203ENST00000375851 HEY1Q9Y5J3 304 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms