RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 MFSD14AQ96MC6 490 aa17.37■□□□□ 0.37
SDHB-201ENST00000375499 PLVAPQ9BX97 442 aa17.37■□□□□ 0.37
SDHB-201ENST00000375499 CWH43Q9H720 699 aa17.37■□□□□ 0.37
SDHB-201ENST00000375499 TUFT1Q9NNX1 390 aa17.37■□□□□ 0.37
SDHB-201ENST00000375499 GPRC5CQ9NQ84 441 aa17.37■□□□□ 0.37
SDHB-201ENST00000375499 PLAGL2Q9UPG8 496 aa17.37■□□□□ 0.37
SDHB-201ENST00000375499 C19orf67A6NJJ6 358 aa17.36■□□□□ 0.37
SDHB-201ENST00000375499 PP2D1A8MPX8 630 aa17.36■□□□□ 0.37
SDHB-201ENST00000375499 GAS2O43903 313 aaKnown RBP17.36■□□□□ 0.37
SDHB-201ENST00000375499 ARL2P36404 184 aa17.36■□□□□ 0.37
SDHB-201ENST00000375499 FXR2P51116 673 aaKnown RBP eCLIP17.36■□□□□ 0.372e-8■■■□□ 15
SDHB-201ENST00000375499 NHLH1Q02575 133 aa17.36■□□□□ 0.37
SDHB-201ENST00000375499 CUL4AQ13619 759 aa17.36■□□□□ 0.37
SDHB-201ENST00000375499 CAPSQ13938 189 aa17.36■□□□□ 0.37
SDHB-201ENST00000375499 LONRF3Q496Y0 759 aa17.36■□□□□ 0.37
SDHB-201ENST00000375499 FAM43BQ6ZT52 329 aaPredicted RBP17.36■□□□□ 0.37
SDHB-201ENST00000375499 CATSPER4Q7RTX7 472 aa17.36■□□□□ 0.37
SDHB-201ENST00000375499 SPPL3Q8TCT6 385 aa17.36■□□□□ 0.37
SDHB-201ENST00000375499 POLR3CQ9BUI4 534 aaPredicted RBP17.36■□□□□ 0.37
SDHB-201ENST00000375499 TMEM117Q9H0C3 514 aa17.36■□□□□ 0.37
SDHB-201ENST00000375499 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.36■□□□□ 0.37
SDHB-201ENST00000375499 AGPAT5Q9NUQ2 364 aa17.36■□□□□ 0.37
SDHB-201ENST00000375499 TYW1Q9NV66 732 aaKnown RBP17.36■□□□□ 0.37
SDHB-201ENST00000375499 SMC3Q9UQE7 1217 aa17.36■□□□□ 0.37
SDHB-201ENST00000375499 PCDHGC5Q9Y5F6 944 aa17.36■□□□□ 0.37
SDHB-201ENST00000375499 DGAT1O75907 488 aa17.35■□□□□ 0.37
SDHB-201ENST00000375499 GLRA2P23416 452 aa17.35■□□□□ 0.37
SDHB-201ENST00000375499 RPA1P27694 616 aa17.35■□□□□ 0.37
SDHB-201ENST00000375499 IRS1P35568 1242 aa17.35■□□□□ 0.37
SDHB-201ENST00000375499 PBX3P40426 434 aa17.35■□□□□ 0.37
SDHB-201ENST00000375499 PHKA2P46019 1235 aa17.35■□□□□ 0.37
SDHB-201ENST00000375499 TWF2Q6IBS0 349 aaKnown RBP17.35■□□□□ 0.37
SDHB-201ENST00000375499 MAEAQ7L5Y9 396 aa17.35■□□□□ 0.37
SDHB-201ENST00000375499 ADHFE1Q8IWW8 467 aa17.35■□□□□ 0.37
SDHB-201ENST00000375499 EXOC8Q8IYI6 725 aa17.35■□□□□ 0.37
SDHB-201ENST00000375499 HELQQ8TDG4 1101 aa17.35■□□□□ 0.37
SDHB-201ENST00000375499 TCP11Q8WWU5 503 aa17.35■□□□□ 0.37
SDHB-201ENST00000375499 P2RX5Q93086 422 aa17.35■□□□□ 0.37
SDHB-201ENST00000375499 POP1Q99575 1024 aaKnown RBP17.35■□□□□ 0.37
SDHB-201ENST00000375499 POLR3FQ9H1D9 316 aaPredicted RBP17.35■□□□□ 0.37
SDHB-201ENST00000375499 NSUN3Q9H649 340 aaKnown RBP17.35■□□□□ 0.37
SDHB-201ENST00000375499 KIF3AQ9Y496 699 aa17.35■□□□□ 0.37
SDHB-201ENST00000375499 HOXA11P31270 313 aaPredicted RBP17.34■□□□□ 0.37
SDHB-201ENST00000375499 GTF2F1P35269 517 aaKnown RBP eCLIP17.34■□□□□ 0.37
SDHB-201ENST00000375499 PTENP60484 403 aa17.34■□□□□ 0.37
SDHB-201ENST00000375499 ZP2Q05996 745 aa17.34■□□□□ 0.37
SDHB-201ENST00000375499 SRGAP1Q7Z6B7 1085 aa17.34■□□□□ 0.37
SDHB-201ENST00000375499 IGSF22Q8N9C0 903 aa17.34■□□□□ 0.37
SDHB-201ENST00000375499 COLGALT1Q8NBJ5 622 aa17.34■□□□□ 0.37
SDHB-201ENST00000375499 FBXL18Q96ME1 805 aa17.34■□□□□ 0.37
SDHB-201ENST00000375499 INO80BQ9C086 356 aaPredicted RBP17.34■□□□□ 0.37
SDHB-201ENST00000375499 LMAN2LQ9H0V9 348 aa17.34■□□□□ 0.37
SDHB-201ENST00000375499 CHST12Q9NRB3 414 aa17.34■□□□□ 0.37
SDHB-201ENST00000375499 FAM105AQ9NUU6 356 aa17.34■□□□□ 0.37
SDHB-201ENST00000375499 DACT1Q9NYF0 836 aa17.34■□□□□ 0.37
SDHB-201ENST00000375499 GTF3C3Q9Y5Q9 886 aa17.34■□□□□ 0.37
SDHB-201ENST00000375499 H3BQV1 296 aa17.33■□□□□ 0.36
SDHB-201ENST00000375499 CDC25AP30304 524 aa17.33■□□□□ 0.36
SDHB-201ENST00000375499 CCT6AP40227 531 aaKnown RBP17.33■□□□□ 0.36
SDHB-201ENST00000375499 MBTD1Q05BQ5 628 aa17.33■□□□□ 0.36
SDHB-201ENST00000375499 AMHR2Q16671 573 aa17.33■□□□□ 0.36
SDHB-201ENST00000375499 UBXN11Q5T124 520 aa17.33■□□□□ 0.36
SDHB-201ENST00000375499 SPOUT1Q5T280 376 aaKnown RBP17.33■□□□□ 0.36
SDHB-201ENST00000375499 ADGRD2Q7Z7M1 963 aa17.33■□□□□ 0.36
SDHB-201ENST00000375499 POF1BQ8WVV4 589 aa17.33■□□□□ 0.36
SDHB-201ENST00000375499 BSNDQ8WZ55 320 aa17.33■□□□□ 0.36
SDHB-201ENST00000375499 CCDC43Q96MW1 224 aaKnown RBP17.33■□□□□ 0.36
SDHB-201ENST00000375499 PRRX2Q99811 253 aa17.33■□□□□ 0.36
SDHB-201ENST00000375499 MMTAG2Q9BU76 263 aaKnown RBP17.33■□□□□ 0.36
SDHB-201ENST00000375499 TRAIPQ9BWF2 469 aa17.33■□□□□ 0.36
SDHB-201ENST00000375499 DBR1Q9UK59 544 aaKnown RBP17.33■□□□□ 0.36
SDHB-201ENST00000375499 H3BQ06 376 aaPredicted RBP17.32■□□□□ 0.36
SDHB-201ENST00000375499 ASAP2O43150 1006 aa17.32■□□□□ 0.36
SDHB-201ENST00000375499 B4GALT3O60512 393 aa17.32■□□□□ 0.36
SDHB-201ENST00000375499 TSPAN1O60635 241 aa17.32■□□□□ 0.36
SDHB-201ENST00000375499 XRCC6P12956 609 aaKnown RBP eCLIP17.32■□□□□ 0.36
SDHB-201ENST00000375499 ATP2C1P98194 919 aaPredicted RBP17.32■□□□□ 0.36
SDHB-201ENST00000375499 HYAL1Q12794 435 aa17.32■□□□□ 0.36
SDHB-201ENST00000375499 LARP1BQ659C4 914 aaKnown RBP17.32■□□□□ 0.36
SDHB-201ENST00000375499 IFNLR1Q8IU57 520 aaPredicted RBP17.32■□□□□ 0.36
SDHB-201ENST00000375499 LRRC43Q8N309 656 aa17.32■□□□□ 0.36
SDHB-201ENST00000375499 ERMNQ8TAM6 284 aa17.32■□□□□ 0.36
SDHB-201ENST00000375499 SNX29Q8TEQ0 813 aa17.32■□□□□ 0.36
SDHB-201ENST00000375499 CPB2Q96IY4 423 aa17.32■□□□□ 0.36
SDHB-201ENST00000375499 NACC1Q96RE7 527 aa17.32■□□□□ 0.36
SDHB-201ENST00000375499 POLD4Q9HCU8 107 aa17.32■□□□□ 0.36
SDHB-201ENST00000375499 RNF216Q9NWF9 866 aaPredicted RBP17.32■□□□□ 0.36
SDHB-201ENST00000375499 LRWD1Q9UFC0 647 aa17.32■□□□□ 0.36
SDHB-201ENST00000375499 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.32■□□□□ 0.36
SDHB-201ENST00000375499 HOXA2O43364 376 aa17.31■□□□□ 0.36
SDHB-201ENST00000375499 FGF18O76093 207 aa17.31■□□□□ 0.36
SDHB-201ENST00000375499 EOMESO95936 686 aa17.31■□□□□ 0.36
SDHB-201ENST00000375499 AFF1P51825 1210 aaKnown RBP17.31■□□□□ 0.36
SDHB-201ENST00000375499 MXD4Q14582 209 aaPredicted RBP17.31■□□□□ 0.36
SDHB-201ENST00000375499 NAALADL2Q58DX5 795 aa17.31■□□□□ 0.36
SDHB-201ENST00000375499 RILPL1Q5EBL4 403 aa17.31■□□□□ 0.36
SDHB-201ENST00000375499 HAUS3Q68CZ6 603 aa17.31■□□□□ 0.36
SDHB-201ENST00000375499 PADI6Q6TGC4 694 aa17.31■□□□□ 0.36
SDHB-201ENST00000375499 AGMOQ6ZNB7 445 aa17.31■□□□□ 0.36
SDHB-201ENST00000375499 KCNK18Q7Z418 384 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms