RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 POLR2GP62487 172 aaKnown RBP eCLIP8.54□□□□□ -1.04
USP48-203ENST00000374732 DSC3Q14574 896 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 SKOR2Q2VWA4 1001 aaPredicted RBP8.54□□□□□ -1.04
USP48-203ENST00000374732 ZNF566Q969W8 418 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 PHF20Q9BVI0 1012 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 GGA3Q9NZ52 723 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 EHD2Q9NZN4 543 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 SH3GLB1Q9Y371 365 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 CRB1P82279 1406 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 KLRG2A4D1S0 409 aaPredicted RBP8.54□□□□□ -1.04
USP48-203ENST00000374732 SNPHO15079 494 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 MAPK13O15264 365 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 USP2O75604 605 aaPredicted RBP8.54□□□□□ -1.04
USP48-203ENST00000374732 SURF6O75683 361 aaKnown RBP8.54□□□□□ -1.04
USP48-203ENST00000374732 GLAP06280 429 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 ALDH3A1P30838 453 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 L1CAMP32004 1257 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 LIG3P49916 1009 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 CLCN4P51793 760 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 HADHBP55084 474 aaKnown RBP8.54□□□□□ -1.04
USP48-203ENST00000374732 BPIFB4P59827 614 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 GSTM4Q03013 218 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 NIPAL4Q0D2K0 466 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 CCDC153Q494R4 210 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 SLC27A3Q5K4L6 730 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 TCERG1LQ5VWI1 586 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 MIS18BP1Q6P0N0 1132 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 TUBA3EQ6PEY2 450 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 KIAA0907Q7Z7F0 614 aaPredicted RBP8.54□□□□□ -1.04
USP48-203ENST00000374732 DDI1Q8WTU0 396 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 PEX13Q92968 403 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 TMEM237Q96Q45 408 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 TSG101Q99816 390 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 ASPSCR1Q9BZE9 553 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 FAM107BQ9H098 131 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 ARHGEF38Q9NXL2 777 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 RNF112Q9ULX5 631 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 ATP6V1DQ9Y5K8 247 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 PTPRCP08575 1304 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 IGSF1Q8N6C5 1336 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 IGF2BP3O00425 579 aaKnown RBP eCLIP8.54□□□□□ -1.04
USP48-203ENST00000374732 ENC1O14682 589 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 HSPA4LO95757 839 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 POLR3DP05423 398 aaPredicted RBP8.54□□□□□ -1.04
USP48-203ENST00000374732 CDH3P22223 829 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 NLRP5P59047 1200 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 MAP3K9P80192 1104 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 CSTF3Q12996 717 aaKnown RBP8.54□□□□□ -1.04
USP48-203ENST00000374732 E2F2Q14209 437 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 NAA30Q147X3 362 aaPredicted RBP8.54□□□□□ -1.04
USP48-203ENST00000374732 OLFM4Q6UX06 510 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 CLEC17AQ6ZS10 378 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 STK32CQ86UX6 486 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 TSPYL6Q8N831 410 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 POF1BQ8WVV4 589 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 EHD1Q9H4M9 534 aa8.54□□□□□ -1.04
USP48-203ENST00000374732 MAP3K19Q56UN5 1328 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 LRRC37A3O60309 1634 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 RTL1A6NKG5 1358 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 F5H423 210 aaPredicted RBP8.53□□□□□ -1.04
USP48-203ENST00000374732 ZFYP08048 801 aaPredicted RBP8.53□□□□□ -1.04
USP48-203ENST00000374732 AKR1B1P15121 316 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 TRIM71Q2Q1W2 868 aaKnown RBP8.53□□□□□ -1.04
USP48-203ENST00000374732 AARDQ4LEZ3 155 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 TJAP1Q5JTD0 557 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 C6orf183Q5T699 404 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 CCDC62Q6P9F0 684 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 ZNF598Q86UK7 904 aaKnown RBP8.53□□□□□ -1.04
USP48-203ENST00000374732 C8orf58Q8NAV2 365 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 CASP10Q92851 521 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 PFDN4Q9NQP4 134 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 INIPQ9NRY2 104 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 BABAM1Q9NWV8 329 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.53□□□□□ -1.04
USP48-203ENST00000374732 MYO1AQ9UBC5 1043 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 EXOC6BQ9Y2D4 811 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 PCDHB6Q9Y5E3 794 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 PCDHB2Q9Y5E7 798 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 ERICH2A1L162 156 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 B4DLN1 442 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 RARGP13631 454 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 SOX6P35712 828 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 CBX5P45973 191 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 ETV1P50549 477 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 PRKG2Q13237 762 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 ZNF124Q15973 351 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 ALKBH5Q6P6C2 394 aaKnown RBP8.53□□□□□ -1.04
USP48-203ENST00000374732 FOXR1Q6PIV2 292 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 LDHAL6AQ6ZMR3 332 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 TTLL7Q6ZT98 887 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 GALNT7Q86SF2 657 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 SLC22A9Q8IVM8 553 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 CD302Q8IX05 232 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 CCDC155Q8N6L0 562 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 RAPGEF5Q92565 580 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 GJD4Q96KN9 370 aaPredicted RBP8.53□□□□□ -1.04
USP48-203ENST00000374732 TBC1D32Q96NH3 1257 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 CEP44Q9C0F1 390 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 TNKS2Q9H2K2 1166 aa8.53□□□□□ -1.04
USP48-203ENST00000374732 RHBGQ9H310 441 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms