RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 COL4A3BPQ9Y5P4 624 aa18.07■□□□□ 0.48
HDAC8-202ENST00000373556 MARCH6O60337 910 aa18.06■□□□□ 0.48
HDAC8-202ENST00000373556 P4HBP07237 508 aaKnown RBP18.06■□□□□ 0.48
HDAC8-202ENST00000373556 GCFC2P16383 781 aaKnown RBP18.06■□□□□ 0.48
HDAC8-202ENST00000373556 POLGP54098 1239 aaPredicted RBP18.06■□□□□ 0.48
HDAC8-202ENST00000373556 AK2P54819 239 aa18.06■□□□□ 0.48
HDAC8-202ENST00000373556 ZXDAP98168 799 aa18.06■□□□□ 0.48
HDAC8-202ENST00000373556 TRIM67Q6ZTA4 783 aa18.06■□□□□ 0.48
HDAC8-202ENST00000373556 MRPL43Q8N983 215 aaKnown RBP18.06■□□□□ 0.48
HDAC8-202ENST00000373556 PRPF31Q8WWY3 499 aaKnown RBP18.06■□□□□ 0.48
HDAC8-202ENST00000373556 AUTS2Q8WXX7 1259 aa18.06■□□□□ 0.48
HDAC8-202ENST00000373556 SLC7A3Q8WY07 619 aa18.06■□□□□ 0.48
HDAC8-202ENST00000373556 TMEM169Q96HH4 297 aa18.06■□□□□ 0.48
HDAC8-202ENST00000373556 MFSD14AQ96MC6 490 aa18.06■□□□□ 0.48
HDAC8-202ENST00000373556 FBXL18Q96ME1 805 aa18.06■□□□□ 0.48
HDAC8-202ENST00000373556 LXNQ9BS40 222 aa18.06■□□□□ 0.48
HDAC8-202ENST00000373556 GBP3Q9H0R5 595 aa18.06■□□□□ 0.48
HDAC8-202ENST00000373556 TBC1D13Q9NVG8 400 aa18.06■□□□□ 0.48
HDAC8-202ENST00000373556 RGL1Q9NZL6 768 aa18.06■□□□□ 0.48
HDAC8-202ENST00000373556 HCFC2Q9Y5Z7 792 aa18.06■□□□□ 0.48
HDAC8-202ENST00000373556 PIEZO1Q92508 2521 aa18.05■□□□□ 0.48
HDAC8-202ENST00000373556 TMEM221A6NGB7 291 aa18.05■□□□□ 0.48
HDAC8-202ENST00000373556 M0R296 226 aa18.05■□□□□ 0.48
HDAC8-202ENST00000373556 ZBTB39O15060 712 aa18.05■□□□□ 0.48
HDAC8-202ENST00000373556 DKC1O60832 514 aaKnown RBP eCLIP18.05■□□□□ 0.48
HDAC8-202ENST00000373556 CLASP2O75122 1294 aaKnown RBP18.05■□□□□ 0.48
HDAC8-202ENST00000373556 CXCL14O95715 111 aa18.05■□□□□ 0.48
HDAC8-202ENST00000373556 SRGAP2CP0DJJ0 459 aa18.05■□□□□ 0.48
HDAC8-202ENST00000373556 SKIP12755 728 aa18.05■□□□□ 0.48
HDAC8-202ENST00000373556 NR5A1Q13285 461 aa18.05■□□□□ 0.48
HDAC8-202ENST00000373556 NOMO2Q5JPE7 1267 aa18.05■□□□□ 0.48
HDAC8-202ENST00000373556 GLB1LQ6UWU2 654 aa18.05■□□□□ 0.48
HDAC8-202ENST00000373556 VPS52Q8N1B4 723 aa18.05■□□□□ 0.48
HDAC8-202ENST00000373556 BCL7CQ8WUZ0 217 aaPredicted RBP18.05■□□□□ 0.48
HDAC8-202ENST00000373556 CASP10Q92851 521 aa18.05■□□□□ 0.48
HDAC8-202ENST00000373556 DYDC2Q96IM9 177 aa18.05■□□□□ 0.48
HDAC8-202ENST00000373556 DHX33Q9H6R0 707 aaKnown RBP18.05■□□□□ 0.48
HDAC8-202ENST00000373556 NRDE2Q9H7Z3 1164 aa18.05■□□□□ 0.48
HDAC8-202ENST00000373556 MINDY3Q9H8M7 445 aa18.05■□□□□ 0.48
HDAC8-202ENST00000373556 ORC3Q9UBD5 711 aaPredicted RBP18.05■□□□□ 0.48
HDAC8-202ENST00000373556 DNAJB4Q9UDY4 337 aa18.05■□□□□ 0.48
HDAC8-202ENST00000373556 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.04■□□□□ 0.48
HDAC8-202ENST00000373556 TBX3O15119 743 aa18.04■□□□□ 0.48
HDAC8-202ENST00000373556 B4GALT3O60512 393 aa18.04■□□□□ 0.48
HDAC8-202ENST00000373556 OFD1O75665 1012 aa18.04■□□□□ 0.48
HDAC8-202ENST00000373556 LARGE1O95461 756 aa18.04■□□□□ 0.48
HDAC8-202ENST00000373556 YWHABP31946 246 aaKnown RBP18.04■□□□□ 0.48
HDAC8-202ENST00000373556 RFC5P40937 340 aa18.04■□□□□ 0.48
HDAC8-202ENST00000373556 RAB27AP51159 221 aa18.04■□□□□ 0.48
HDAC8-202ENST00000373556 CYP4A11Q02928 519 aa18.04■□□□□ 0.48
HDAC8-202ENST00000373556 RNASELQ05823 741 aaKnown RBP18.04■□□□□ 0.48
HDAC8-202ENST00000373556 SPIRE1Q08AE8 756 aa18.04■□□□□ 0.48
HDAC8-202ENST00000373556 LAMTOR4Q0VGL1 99 aa18.04■□□□□ 0.48
HDAC8-202ENST00000373556 CTTNQ14247 550 aaKnown RBP18.04■□□□□ 0.48
HDAC8-202ENST00000373556 EPHA7Q15375 998 aa18.04■□□□□ 0.48
HDAC8-202ENST00000373556 ALYREFQ86V81 257 aaKnown RBP18.04■□□□□ 0.48
HDAC8-202ENST00000373556 NECAB1Q8N987 351 aa18.04■□□□□ 0.48
HDAC8-202ENST00000373556 PSPC1Q8WXF1 523 aaKnown RBP18.04■□□□□ 0.48
HDAC8-202ENST00000373556 PBXIP1Q96AQ6 731 aa18.04■□□□□ 0.48
HDAC8-202ENST00000373556 NAP1L4Q99733 375 aaKnown RBP18.04■□□□□ 0.48
HDAC8-202ENST00000373556 ZBP1Q9H171 429 aa18.04■□□□□ 0.48
HDAC8-202ENST00000373556 AGPAT5Q9NUQ2 364 aa18.04■□□□□ 0.48
HDAC8-202ENST00000373556 PCDHB2Q9Y5E7 798 aa18.04■□□□□ 0.48
HDAC8-202ENST00000373556 ZNF623O75123 536 aa18.03■□□□□ 0.48
HDAC8-202ENST00000373556 GALTP07902 379 aa18.03■□□□□ 0.48
HDAC8-202ENST00000373556 FDPSP14324 419 aaKnown RBP18.03■□□□□ 0.48
HDAC8-202ENST00000373556 HOXB8P17481 243 aaPredicted RBP18.03■□□□□ 0.48
HDAC8-202ENST00000373556 SLC11A1P49279 550 aa18.03■□□□□ 0.48
HDAC8-202ENST00000373556 NHLH1Q02575 133 aa18.03■□□□□ 0.48
HDAC8-202ENST00000373556 EMC2Q15006 297 aa18.03■□□□□ 0.48
HDAC8-202ENST00000373556 XKR9Q5GH70 373 aa18.03■□□□□ 0.48
HDAC8-202ENST00000373556 ZNF280BQ86YH2 543 aa18.03■□□□□ 0.48
HDAC8-202ENST00000373556 C4orf19Q8IY42 314 aa18.03■□□□□ 0.48
HDAC8-202ENST00000373556 IGSF21Q96ID5 467 aa18.03■□□□□ 0.48
HDAC8-202ENST00000373556 TSHZ2Q9NRE2 1034 aa18.03■□□□□ 0.48
HDAC8-202ENST00000373556 NEFLP07196 543 aa18.02■□□□□ 0.48
HDAC8-202ENST00000373556 WEE2P0C1S8 567 aa18.02■□□□□ 0.48
HDAC8-202ENST00000373556 KRT2P35908 639 aa18.02■□□□□ 0.48
HDAC8-202ENST00000373556 AFF1P51825 1210 aaKnown RBP18.02■□□□□ 0.48
HDAC8-202ENST00000373556 FOSBP53539 338 aa18.02■□□□□ 0.48
HDAC8-202ENST00000373556 ANKRD1Q15327 319 aa18.02■□□□□ 0.48
HDAC8-202ENST00000373556 TPRNQ4KMQ1 711 aa18.02■□□□□ 0.48
HDAC8-202ENST00000373556 UBXN11Q5T124 520 aa18.02■□□□□ 0.48
HDAC8-202ENST00000373556 KANK3Q6NY19 840 aa18.02■□□□□ 0.48
HDAC8-202ENST00000373556 AGMOQ6ZNB7 445 aa18.02■□□□□ 0.48
HDAC8-202ENST00000373556 SRGAP1Q7Z6B7 1085 aa18.02■□□□□ 0.48
HDAC8-202ENST00000373556 DDX53Q86TM3 631 aaKnown RBP18.02■□□□□ 0.48
HDAC8-202ENST00000373556 TPH2Q8IWU9 490 aa18.02■□□□□ 0.48
HDAC8-202ENST00000373556 EXOC8Q8IYI6 725 aa18.02■□□□□ 0.48
HDAC8-202ENST00000373556 C12orf76Q8N812 135 aaPredicted RBP18.02■□□□□ 0.48
HDAC8-202ENST00000373556 WASF1Q92558 559 aa18.02■□□□□ 0.48
HDAC8-202ENST00000373556 TNFRSF25Q93038 417 aa18.02■□□□□ 0.48
HDAC8-202ENST00000373556 PGBD4Q96DM1 585 aa18.02■□□□□ 0.48
HDAC8-202ENST00000373556 VN1R3Q9BXE9 311 aa18.02■□□□□ 0.48
HDAC8-202ENST00000373556 PPME1Q9Y570 386 aa18.02■□□□□ 0.48
HDAC8-202ENST00000373556 BAG4O95429 457 aaKnown RBP18.01■□□□□ 0.47
HDAC8-202ENST00000373556 EPCAMP16422 314 aa18.01■□□□□ 0.47
HDAC8-202ENST00000373556 HOXA11P31270 313 aaPredicted RBP18.01■□□□□ 0.47
HDAC8-202ENST00000373556 ANAPC15P60006 121 aa18.01■□□□□ 0.47
HDAC8-202ENST00000373556 BMS1Q14692 1282 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms