RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 MAPK7Q13164 816 aa20.24■□□□□ 0.83
PBX3-202ENST00000373482 GIT2Q14161 759 aa20.24■□□□□ 0.83
PBX3-202ENST00000373482 DYMQ7RTS9 669 aa20.24■□□□□ 0.83
PBX3-202ENST00000373482 DAW1Q8N136 415 aa20.24■□□□□ 0.83
PBX3-202ENST00000373482 DDX12PQ92771 950 aa20.24■□□□□ 0.83
PBX3-202ENST00000373482 SLC9A7Q96T83 725 aa20.24■□□□□ 0.83
PBX3-202ENST00000373482 KMT5AQ9NQR1 393 aa20.24■□□□□ 0.83
PBX3-202ENST00000373482 HPSEQ9Y251 543 aa20.24■□□□□ 0.83
PBX3-202ENST00000373482 TRIP11Q15643 1979 aa20.24■□□□□ 0.83
PBX3-202ENST00000373482 CITO14578 2027 aa20.24■□□□□ 0.83
PBX3-202ENST00000373482 SFI1A8K8P3 1242 aa20.23■□□□□ 0.83
PBX3-202ENST00000373482 PLS3P13797 630 aa20.23■□□□□ 0.83
PBX3-202ENST00000373482 EFNA5P52803 228 aa20.23■□□□□ 0.83
PBX3-202ENST00000373482 CDCA2Q69YH5 1023 aaPredicted RBP20.23■□□□□ 0.83
PBX3-202ENST00000373482 ZHX3Q9H4I2 956 aa20.23■□□□□ 0.83
PBX3-202ENST00000373482 MINDY3Q9H8M7 445 aa20.23■□□□□ 0.83
PBX3-202ENST00000373482 PARVGQ9HBI0 331 aa20.23■□□□□ 0.83
PBX3-202ENST00000373482 KBTBD4Q9NVX7 518 aa20.23■□□□□ 0.83
PBX3-202ENST00000373482 RNF216Q9NWF9 866 aaPredicted RBP20.23■□□□□ 0.83
PBX3-202ENST00000373482 TRIOBPQ9H2D6 2365 aa20.23■□□□□ 0.83
PBX3-202ENST00000373482 PHLPP2Q6ZVD8 1323 aa20.23■□□□□ 0.83
PBX3-202ENST00000373482 FAM237AA0A1B0GTK4 181 aa20.22■□□□□ 0.83
PBX3-202ENST00000373482 MYMKA6NI61 221 aa20.22■□□□□ 0.83
PBX3-202ENST00000373482 SLFN14P0C7P3 912 aa20.22■□□□□ 0.83
PBX3-202ENST00000373482 NPTX2P47972 431 aa20.22■□□□□ 0.83
PBX3-202ENST00000373482 NDUFA8P51970 172 aa20.22■□□□□ 0.83
PBX3-202ENST00000373482 MBTD1Q05BQ5 628 aa20.22■□□□□ 0.83
PBX3-202ENST00000373482 MAPK6Q16659 721 aa20.22■□□□□ 0.83
PBX3-202ENST00000373482 MYCT1Q8N699 235 aa20.22■□□□□ 0.83
PBX3-202ENST00000373482 PHOSPHO2Q8TCD6 241 aa20.22■□□□□ 0.83
PBX3-202ENST00000373482 STAMQ92783 540 aa20.22■□□□□ 0.83
PBX3-202ENST00000373482 ADAM2Q99965 735 aa20.22■□□□□ 0.83
PBX3-202ENST00000373482 TSPYL2Q9H2G4 693 aaPredicted RBP20.22■□□□□ 0.83
PBX3-202ENST00000373482 TMX1Q9H3N1 280 aa20.22■□□□□ 0.83
PBX3-202ENST00000373482 CHST12Q9NRB3 414 aa20.22■□□□□ 0.83
PBX3-202ENST00000373482 C1orf112Q9NSG2 853 aa20.22■□□□□ 0.83
PBX3-202ENST00000373482 PRMT7Q9NVM4 692 aaPredicted RBP20.22■□□□□ 0.83
PBX3-202ENST00000373482 DACT1Q9NYF0 836 aa20.22■□□□□ 0.83
PBX3-202ENST00000373482 SERTAD1Q9UHV2 236 aa20.22■□□□□ 0.83
PBX3-202ENST00000373482 PIN4Q9Y237 131 aaKnown RBP20.22■□□□□ 0.83
PBX3-202ENST00000373482 RALGAPA2Q2PPJ7 1873 aa20.22■□□□□ 0.83
PBX3-202ENST00000373482 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.21■□□□□ 0.83
PBX3-202ENST00000373482 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.21■□□□□ 0.83
PBX3-202ENST00000373482 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.21■□□□□ 0.83
PBX3-202ENST00000373482 H0YCG3 227 aa20.21■□□□□ 0.83
PBX3-202ENST00000373482 ENPP3O14638 875 aa20.21■□□□□ 0.83
PBX3-202ENST00000373482 ATP2A2P16615 1042 aaKnown RBP20.21■□□□□ 0.83
PBX3-202ENST00000373482 AXLP30530 894 aa20.21■□□□□ 0.83
PBX3-202ENST00000373482 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.21■□□□□ 0.83
PBX3-202ENST00000373482 MYOCDQ8IZQ8 938 aa20.21■□□□□ 0.83
PBX3-202ENST00000373482 SPIRE2Q8WWL2 714 aa20.21■□□□□ 0.83
PBX3-202ENST00000373482 CCDC34Q96HJ3 373 aa20.21■□□□□ 0.83
PBX3-202ENST00000373482 PRIMPOLQ96LW4 560 aa20.21■□□□□ 0.83
PBX3-202ENST00000373482 RGS18Q9NS28 235 aa20.21■□□□□ 0.83
PBX3-202ENST00000373482 AGPAT5Q9NUQ2 364 aa20.21■□□□□ 0.83
PBX3-202ENST00000373482 KIAA1671Q9BY89 1806 aa20.2■□□□□ 0.82
PBX3-202ENST00000373482 K7ERI5 159 aa20.2■□□□□ 0.82
PBX3-202ENST00000373482 MGEA5O60502 916 aa20.2■□□□□ 0.82
PBX3-202ENST00000373482 IDEP14735 1019 aa20.2■□□□□ 0.82
PBX3-202ENST00000373482 ZNF131P52739 623 aa20.2■□□□□ 0.82
PBX3-202ENST00000373482 DEFB103AP81534 67 aa20.2■□□□□ 0.82
PBX3-202ENST00000373482 LRIT3Q3SXY7 679 aa20.2■□□□□ 0.82
PBX3-202ENST00000373482 TWF2Q6IBS0 349 aaKnown RBP20.2■□□□□ 0.82
PBX3-202ENST00000373482 TMEM87AQ8NBN3 555 aa20.2■□□□□ 0.82
PBX3-202ENST00000373482 DNAJC19Q96DA6 116 aa20.2■□□□□ 0.82
PBX3-202ENST00000373482 GBP4Q96PP9 640 aa20.2■□□□□ 0.82
PBX3-202ENST00000373482 NTPCRQ9BSD7 190 aaKnown RBP20.2■□□□□ 0.82
PBX3-202ENST00000373482 KIFC3Q9BVG8 833 aa20.2■□□□□ 0.82
PBX3-202ENST00000373482 GOLPH3LQ9H4A5 285 aa20.2■□□□□ 0.82
PBX3-202ENST00000373482 RBAK-RBAKDNI3L0D1 243 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 SLC16A4O15374 487 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 ACTN4O43707 911 aaKnown RBP20.19■□□□□ 0.82
PBX3-202ENST00000373482 TRAK2O60296 914 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 ZNF202O95125 648 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 PRKCBP05771 671 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 STAG3L1P0CL83 205 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 GAP43P17677 238 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 LIG1P18858 919 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 SCP2P22307 547 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 ABCD1P33897 745 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 AFMP43652 599 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 DSC3Q14574 896 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 FAM187BQ17R55 369 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 TMEM132AQ24JP5 1023 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 PPP4R3CPQ6ZMV5 832 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 SLC24A5Q71RS6 500 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 RTN4RL1Q86UN2 441 aaPredicted RBP20.19■□□□□ 0.82
PBX3-202ENST00000373482 CCDC65Q8IXS2 484 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 SLC17A8Q8NDX2 589 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 LINC01599Q8WXQ3 324 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 ZBED2Q9BTP6 218 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 TRIM9Q9C026 710 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 FZD8Q9H461 694 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 TMEM134Q9H6X4 195 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 ARHGAP28Q9P2N2 729 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 SEL1LQ9UBV2 794 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 LRFN2Q9ULH4 789 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 ADGRA3Q8IWK6 1321 aa20.19■□□□□ 0.82
PBX3-202ENST00000373482 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.18■□□□□ 0.82
PBX3-202ENST00000373482 TSPAN1O60635 241 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms