RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 VAMP7P51809 220 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 USP17L24Q0WX57 530 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 DRAP1Q14919 205 aaPredicted RBP15.15■□□□□ 0.02
LMX1B-202ENST00000373474 NR1I3Q14994 352 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 HP1BP3Q5SSJ5 553 aaPredicted RBP15.15■□□□□ 0.02
LMX1B-202ENST00000373474 PDXDC2PQ6P474 469 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 USP17L6PQ6QN14 398 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 FRMD5Q7Z6J6 570 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 CYTH2Q99418 400 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 ZCCHC17Q9NP64 241 aaKnown RBP15.15■□□□□ 0.02
LMX1B-202ENST00000373474 FEM1BQ9UK73 627 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 INTUQ9ULD6 942 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 SYCE1LA8MT33 242 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 SNAP23O00161 211 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 PPP1R12AO14974 1030 aaPredicted RBP15.15■□□□□ 0.02
LMX1B-202ENST00000373474 MYBL1P10243 752 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 GCLMP48507 274 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 VSNL1P62760 191 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 MTMR1Q13613 665 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 METTL23Q86XA0 190 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 CRLF3Q8IUI8 442 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 TTC13Q8NBP0 860 aa15.15■□□□□ 0.02
LMX1B-202ENST00000373474 GH2P01242 217 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 EAPPQ56P03 285 aaPredicted RBP15.14■□□□□ 0.01
LMX1B-202ENST00000373474 SULF1Q8IWU6 871 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 SRBD1Q8N5C6 995 aaKnown RBP15.14■□□□□ 0.01
LMX1B-202ENST00000373474 VIPAS39Q9H9C1 493 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 TUBE1Q9UJT0 475 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 ESYT3A0FGR9 886 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 NCF2P19878 526 aaPredicted RBP15.14■□□□□ 0.01
LMX1B-202ENST00000373474 KLHL38Q2WGJ6 581 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 KLC2Q9H0B6 622 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 OSTNP61366 133 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 MIGA2Q7L4E1 593 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 SLC44A5Q8NCS7 719 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 IGDCC4Q8TDY8 1250 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 TNS3Q68CZ2 1445 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 NCOA3Q9Y6Q9 1424 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 KIAA1210Q9ULL0 1709 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 POTEFA5A3E0 1075 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 ANKRD65E5RJM6 399 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 CALB1P05937 261 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 POTEIP0CG38 1075 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 POTEGQ6S5H5 508 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 POTEEQ6S8J3 1075 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 BZW1Q7L1Q6 419 aaKnown RBP15.14■□□□□ 0.01
LMX1B-202ENST00000373474 DDX47Q9H0S4 455 aaKnown RBP15.14■□□□□ 0.01
LMX1B-202ENST00000373474 SNX12Q9UMY4 172 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 ZNF711Q9Y462 761 aa15.14■□□□□ 0.01
LMX1B-202ENST00000373474 ZNF335Q9H4Z2 1342 aaPredicted RBP15.13■□□□□ 0.01
LMX1B-202ENST00000373474 NVLO15381 856 aaKnown RBP15.13■□□□□ 0.01
LMX1B-202ENST00000373474 DAB1O75553 588 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 ZRANB2O95218 330 aaKnown RBP eCLIP15.13■□□□□ 0.01
LMX1B-202ENST00000373474 BAG6P46379 1132 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 CCNA1P78396 465 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 DHX34Q14147 1143 aaKnown RBP15.13■□□□□ 0.01
LMX1B-202ENST00000373474 SPOUT1Q5T280 376 aaKnown RBP15.13■□□□□ 0.01
LMX1B-202ENST00000373474 BBS5Q8N3I7 341 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 SPATA4Q8NEY3 305 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 SLC4A7Q9Y6M7 1214 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 COPEO14579 308 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 KRT37O76014 449 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 SOX5P35711 763 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 ZNF211Q13398 564 aaPredicted RBP15.13■□□□□ 0.01
LMX1B-202ENST00000373474 SNF8Q96H20 258 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 SUCLA2Q9P2R7 463 aaPredicted RBP15.13■□□□□ 0.01
LMX1B-202ENST00000373474 COPG1Q9Y678 874 aaKnown RBP15.13■□□□□ 0.01
LMX1B-202ENST00000373474 ABCB11O95342 1321 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 SRGNP10124 158 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 PODNQ7Z5L7 613 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 HEMGNQ9BXL5 484 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 OSBPL1AQ9BXW6 950 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 ING2Q9H160 280 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 CD209Q9NNX6 404 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 NARFQ9UHQ1 456 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 CFLARO15519 480 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 TDP2O95551 362 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 STAT3P40763 770 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 USP11P51784 963 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 TBC1D22BQ9NU19 505 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 ZFP69BQ9UJL9 534 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 PFASO15067 1338 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 PTPRMP28827 1452 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 PDHA1P08559 390 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 MRPS15P82914 257 aaKnown RBP15.13■□□□□ 0.01
LMX1B-202ENST00000373474 SPOPLQ6IQ16 392 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 C7orf31Q8N865 590 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 ZNF341Q9BYN7 854 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 ARHGAP26Q9UNA1 814 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 NEXMIFQ5QGS0 1516 aa15.13■□□□□ 0.01
LMX1B-202ENST00000373474 A0A0G2JND7 137 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 SPDYE16A6NNV3 312 aaPredicted RBP15.12■□□□□ 0.01
LMX1B-202ENST00000373474 SERPINB10P48595 397 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 SPDYE2Q495Y8 402 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 MCPH1Q8NEM0 835 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 ZNF512BQ96KM6 892 aaPredicted RBP15.12■□□□□ 0.01
LMX1B-202ENST00000373474 ATP8B3O60423 1300 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 FTLP02792 175 aaPredicted RBP15.12■□□□□ 0.01
LMX1B-202ENST00000373474 KRT8P05787 483 aa15.12■□□□□ 0.01
LMX1B-202ENST00000373474 MCUQ8NE86 351 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms