RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 LMNB1P20700 586 aa14.77□□□□□ -0.04
USP49-201ENST00000373006 RPL13P26373 211 aaKnown RBP14.77□□□□□ -0.04
USP49-201ENST00000373006 SNAP25P60880 206 aa14.77□□□□□ -0.04
USP49-201ENST00000373006 EPM2AIP1Q7L775 607 aaPredicted RBP14.77□□□□□ -0.04
USP49-201ENST00000373006 ZNF804AQ7Z570 1209 aa14.77□□□□□ -0.04
USP49-201ENST00000373006 PRELID2Q8N945 189 aa14.77□□□□□ -0.04
USP49-201ENST00000373006 NAP1L3Q99457 506 aaPredicted RBP14.77□□□□□ -0.04
USP49-201ENST00000373006 RUSC1Q9BVN2 902 aa14.77□□□□□ -0.04
USP49-201ENST00000373006 ECT2Q9H8V3 914 aa14.77□□□□□ -0.04
USP49-201ENST00000373006 METTL14Q9HCE5 456 aaKnown RBP14.77□□□□□ -0.04
USP49-201ENST00000373006 KCNMB3Q9NPA1 279 aa14.77□□□□□ -0.04
USP49-201ENST00000373006 TYW1Q9NV66 732 aaKnown RBP14.77□□□□□ -0.04
USP49-201ENST00000373006 ZBTB5O15062 677 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 AGTP01019 485 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 SPATA31C1P0DKV0 1188 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 RARAP10276 462 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 VCAM1P19320 739 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 NMT1P30419 496 aaKnown RBP14.77□□□□□ -0.05
USP49-201ENST00000373006 ALDH5A1P51649 535 aaPredicted RBP14.77□□□□□ -0.05
USP49-201ENST00000373006 ADCY1Q08828 1119 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 AUHQ13825 339 aaKnown RBP14.77□□□□□ -0.05
USP49-201ENST00000373006 CNGA2Q16280 664 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 THEMIS2Q5TEJ8 643 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 SPICE1Q8N0Z3 855 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 POP1Q99575 1024 aaKnown RBP14.77□□□□□ -0.05
USP49-201ENST00000373006 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.77□□□□□ -0.059e-11■■■■■ 86.5
USP49-201ENST00000373006 TRIM33Q9UPN9 1127 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 STRCQ7RTU9 1775 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 DOT1LQ8TEK3 1739 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 IGF2BP3O00425 579 aaKnown RBP eCLIP14.77□□□□□ -0.05
USP49-201ENST00000373006 TGFB1I1O43294 461 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 SNX3O60493 162 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 DIAPH2O60879 1101 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 GSTA1P08263 222 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 PTGIRP43119 386 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 CBWD6Q4V339 395 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 CBWD3Q5JTY5 395 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 CBWD5Q5RIA9 395 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 MFSD14BQ5SR56 506 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 TRIM68Q6AZZ1 485 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 CCDC137Q6PK04 289 aaKnown RBP14.77□□□□□ -0.05
USP49-201ENST00000373006 FAM186BQ8IYM0 893 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 ANKRD42Q8N9B4 389 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 SYT2Q8N9I0 419 aaPredicted RBP14.77□□□□□ -0.05
USP49-201ENST00000373006 PIGOQ8TEQ8 1089 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 NYXQ9GZU5 481 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 EBF2Q9HAK2 575 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 SPATS2LQ9NUQ6 558 aaKnown RBP14.77□□□□□ -0.05
USP49-201ENST00000373006 CTTNBP2NLQ9P2B4 639 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 RASAL2Q9UJF2 1139 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 PNMA3Q9UL41 463 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 PCDHA1Q9Y5I3 950 aa14.77□□□□□ -0.05
USP49-201ENST00000373006 FAM187AA6NFU0 413 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 RIPK2O43353 540 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 SNHG28P0DPA3 235 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 NQO1P15559 274 aaKnown RBP14.76□□□□□ -0.05
USP49-201ENST00000373006 NCALDP61601 193 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 ADCY2Q08462 1091 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 DHX34Q14147 1143 aaKnown RBP14.76□□□□□ -0.05
USP49-201ENST00000373006 ZKSCAN8Q15776 578 aaPredicted RBP14.76□□□□□ -0.05
USP49-201ENST00000373006 NUGGCQ68CJ6 796 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 EXOC3L1Q86VI1 746 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 GDAP1Q8TB36 358 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 ANO3Q9BYT9 981 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 RGL1Q9NZL6 768 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 ATF5Q9Y2D1 282 aaPredicted RBP14.76□□□□□ -0.05
USP49-201ENST00000373006 THRAP3Q9Y2W1 955 aaKnown RBP14.76□□□□□ -0.05
USP49-201ENST00000373006 AFF2P51816 1311 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 RTN2O75298 545 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 ACSL3O95573 720 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 ZNF746Q6NUN9 644 aaPredicted RBP14.76□□□□□ -0.05
USP49-201ENST00000373006 CPNE8Q86YQ8 564 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 CCDC105Q8IYK2 499 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 SLC20A1Q8WUM9 679 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 DDX23Q9BUQ8 820 aaKnown RBP14.76□□□□□ -0.05
USP49-201ENST00000373006 STK33Q9BYT3 514 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 KCNK9Q9NPC2 374 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 USP40Q9NVE5 1235 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 DNAJC17Q9NVM6 304 aaKnown RBP14.76□□□□□ -0.05
USP49-201ENST00000373006 MTRF1LQ9UGC7 380 aaKnown RBP14.76□□□□□ -0.05
USP49-201ENST00000373006 C15orf41Q9Y2V0 281 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 SH3BP1Q9Y3L3 701 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 LAMB2P55268 1798 aa14.76□□□□□ -0.05
USP49-201ENST00000373006 TBCAO75347 108 aaKnown RBP14.75□□□□□ -0.05
USP49-201ENST00000373006 TTLL1O95922 423 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 TAL1P17542 331 aaPredicted RBP14.75□□□□□ -0.05
USP49-201ENST00000373006 NOVP48745 357 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 CYP2J2P51589 502 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 SPDYCQ5MJ68 293 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 COL23A1Q86Y22 540 aaPredicted RBP14.75□□□□□ -0.05
USP49-201ENST00000373006 SPDYE1Q8NFV5 336 aaPredicted RBP14.75□□□□□ -0.05
USP49-201ENST00000373006 KLHL29Q96CT2 875 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 P2RX7Q99572 595 aaKnown RBP14.75□□□□□ -0.05
USP49-201ENST00000373006 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.75□□□□□ -0.05
USP49-201ENST00000373006 DDX60LQ5H9U9 1706 aaKnown RBP14.75□□□□□ -0.05
USP49-201ENST00000373006 ABCA3Q99758 1704 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 FOXN3O00409 490 aaPredicted RBP14.75□□□□□ -0.05
USP49-201ENST00000373006 ZBTB39O15060 712 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 UFL1O94874 794 aa14.75□□□□□ -0.05
USP49-201ENST00000373006 KRT16P08779 473 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms