RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 O00370 1275 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 TTI1O43156 1089 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 DAPK3O43293 454 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 FTCDO95954 541 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 CUL1Q13616 776 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 CDKAL1Q5VV42 579 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 TYW1BQ6NUM6 668 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 GRAMD2AQ8IUY3 354 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 FAM20CQ8IXL6 584 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 ZBED8Q8IZ13 594 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 GOLM1Q8NBJ4 401 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 U2AF1L4Q8WU68 220 aaKnown RBP11.4□□□□□ -0.58
TRERF1-203ENST00000372917 TLCD1Q96CP7 247 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 PRPF18Q99633 342 aaKnown RBP11.4□□□□□ -0.58
TRERF1-203ENST00000372917 CCDC28BQ9BUN5 200 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 BHMT2Q9H2M3 363 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 SEC31BQ9NQW1 1179 aa11.4□□□□□ -0.58
TRERF1-203ENST00000372917 PACSIN2Q9UNF0 486 aaPredicted RBP11.4□□□□□ -0.58
TRERF1-203ENST00000372917 C3P01024 1663 aa11.4□□□□□ -0.59
TRERF1-203ENST00000372917 MYH10P35580 1976 aa11.4□□□□□ -0.59
TRERF1-203ENST00000372917 CFAP69A5D8W1 941 aa11.4□□□□□ -0.59
TRERF1-203ENST00000372917 ATP5HO75947 161 aa11.4□□□□□ -0.59
TRERF1-203ENST00000372917 CBX6O95503 412 aa11.4□□□□□ -0.59
TRERF1-203ENST00000372917 PDIA3P30101 505 aaKnown RBP11.4□□□□□ -0.59
TRERF1-203ENST00000372917 RCVRNP35243 200 aa11.4□□□□□ -0.59
TRERF1-203ENST00000372917 SKIV2L2P42285 1042 aaKnown RBP11.4□□□□□ -0.59
TRERF1-203ENST00000372917 PPP2R5CQ13362 524 aa11.4□□□□□ -0.59
TRERF1-203ENST00000372917 E2F2Q14209 437 aa11.4□□□□□ -0.59
TRERF1-203ENST00000372917 LPIN1Q14693 890 aa11.4□□□□□ -0.59
TRERF1-203ENST00000372917 TRIM22Q8IYM9 498 aa11.4□□□□□ -0.59
TRERF1-203ENST00000372917 IRGQQ8WZA9 623 aa11.4□□□□□ -0.59
TRERF1-203ENST00000372917 EPSTI1Q96J88 318 aa11.4□□□□□ -0.59
TRERF1-203ENST00000372917 AGPAT5Q9NUQ2 364 aa11.4□□□□□ -0.59
TRERF1-203ENST00000372917 SATB2Q9UPW6 733 aa11.4□□□□□ -0.59
TRERF1-203ENST00000372917 COQ6Q9Y2Z9 468 aa11.4□□□□□ -0.59
TRERF1-203ENST00000372917 WDR17Q8IZU2 1322 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 FAM196BA6NMK8 535 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 PEX14O75381 377 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 MMP13P45452 471 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 MXI1P50539 228 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 TNIP1Q15025 636 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 TNNI3KQ59H18 835 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 RRAGBQ5VZM2 374 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 KCNH5Q8NCM2 988 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 ANKRD36BP1Q96IX9 119 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 HACD3Q9P035 362 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 FPGT-TNNI3KV9GXZ4 949 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 PPP6R2O75170 966 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 PRKCIP41743 596 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 EVA1CP58658 441 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 MDM2Q00987 491 aaPredicted RBP11.39□□□□□ -0.59
TRERF1-203ENST00000372917 DSG1Q02413 1049 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 PCSK7Q16549 785 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 AKAP4Q5JQC9 854 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 NUP93Q8N1F7 819 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 ALG1Q9BT22 464 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 TLR10Q9BXR5 811 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 SH2D4AQ9H788 454 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 ANGEL1Q9UNK9 670 aaKnown RBP11.39□□□□□ -0.59
TRERF1-203ENST00000372917 PCDHA13Q9Y5I0 950 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 MYH7BA7E2Y1 1941 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 AGLP35573 1532 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 FAM208AQ9UK61 1670 aaKnown RBP11.39□□□□□ -0.59
TRERF1-203ENST00000372917 RNASEH1O60930 286 aaKnown RBP11.39□□□□□ -0.59
TRERF1-203ENST00000372917 CETN2P41208 172 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 SPAG1Q07617 926 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 LRRC36Q1X8D7 754 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 ARL13BQ3SXY8 428 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 METTL24Q5JXM2 366 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 DSTYKQ6XUX3 929 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 SCYL3Q8IZE3 742 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 STAMQ92783 540 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 MCUR1Q96AQ8 359 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 LRRC37BQ96QE4 947 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 DSCC1Q9BVC3 393 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 NDUFA13Q9P0J0 144 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 PRKAG3Q9UGI9 489 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 DSEQ9UL01 958 aa11.39□□□□□ -0.59
TRERF1-203ENST00000372917 CCDC169A6NNP5 214 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 TNFRSF10AO00220 468 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 CRY1Q16526 586 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 PTPROQ16827 1216 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 PARP10Q53GL7 1025 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 HSP90AA5PQ58FG0 334 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 KLHDC10Q6PID8 442 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 ECHDC2Q86YB7 292 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 KBTBD3Q8NAB2 608 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 FNBP1Q96RU3 617 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 SETDB2Q96T68 719 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.38□□□□□ -0.59
TRERF1-203ENST00000372917 WASF2Q9Y6W5 498 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 DIP2BQ9P265 1576 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 MROH7Q68CQ1 1323 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 LINC00854A0A1B0GVQ3 168 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 MTRF1O75570 445 aaKnown RBP11.38□□□□□ -0.59
TRERF1-203ENST00000372917 PLEKP08567 350 aaPredicted RBP11.38□□□□□ -0.59
TRERF1-203ENST00000372917 OCM2P0CE71 109 aa11.38□□□□□ -0.59
TRERF1-203ENST00000372917 OCMP0CE72 109 aaPredicted RBP11.38□□□□□ -0.59
TRERF1-203ENST00000372917 TCEA1P23193 301 aaKnown RBP11.38□□□□□ -0.59
TRERF1-203ENST00000372917 EIF3BP55884 814 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms