RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 IGBP1P78318 339 aa17.62■□□□□ 0.41
C9orf78-201ENST00000372447 SNX17Q15036 470 aa17.62■□□□□ 0.41
C9orf78-201ENST00000372447 GRIK4Q16099 956 aa17.62■□□□□ 0.41
C9orf78-201ENST00000372447 FAM26FQ5R3K3 315 aa17.62■□□□□ 0.41
C9orf78-201ENST00000372447 MARCH8Q5T0T0 291 aa17.62■□□□□ 0.41
C9orf78-201ENST00000372447 C1orf53Q5VUE5 145 aa17.62■□□□□ 0.41
C9orf78-201ENST00000372447 PLA2G4FQ68DD2 849 aa17.62■□□□□ 0.41
C9orf78-201ENST00000372447 GDF6Q6KF10 455 aaPredicted RBP17.62■□□□□ 0.41
C9orf78-201ENST00000372447 FOXR2Q6PJQ5 311 aa17.62■□□□□ 0.41
C9orf78-201ENST00000372447 MYOCDQ8IZQ8 938 aa17.62■□□□□ 0.41
C9orf78-201ENST00000372447 LMBR1Q8WVP7 490 aa17.62■□□□□ 0.41
C9orf78-201ENST00000372447 C17orf102A2RUQ5 167 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 GOLGA6L9A6NEM1 432 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 SOWAHDA6NJG2 315 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 FECHP22830 423 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 MTIF2P46199 727 aaKnown RBP17.61■□□□□ 0.41
C9orf78-201ENST00000372447 ADAM17P78536 824 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 PTPN11Q06124 597 aaPredicted RBP17.61■□□□□ 0.41
C9orf78-201ENST00000372447 TARBP2Q15633 366 aaKnown RBP17.61■□□□□ 0.41
C9orf78-201ENST00000372447 LRRC26Q2I0M4 334 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 OTUD6AQ7L8S5 288 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 SYT2Q8N9I0 419 aaPredicted RBP17.61■□□□□ 0.41
C9orf78-201ENST00000372447 GLIS3Q8NEA6 775 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 ZBTB10Q96DT7 871 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 CEP89Q96ST8 783 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 SEZ6LQ9BYH1 1024 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 ABHD10Q9NUJ1 306 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 TRMT13Q9NUP7 481 aaKnown RBP17.61■□□□□ 0.41
C9orf78-201ENST00000372447 NPHP3-ACAD11A0A0J9YXS1 232 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 FRMD3A2A2Y4 597 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 RRN3P2A6NIE6 340 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 KRT18P05783 430 aaKnown RBP17.61■□□□□ 0.41
C9orf78-201ENST00000372447 TRIM60Q495X7 471 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 MTERF2Q49AM1 385 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 ARSHQ5FYA8 562 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 ZNF484Q5JVG2 852 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 KCTD17Q8N5Z5 321 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 CEP170P1Q96L14 293 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 TSG101Q99816 390 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 NOC4LQ9BVI4 516 aaKnown RBP17.61■□□□□ 0.41
C9orf78-201ENST00000372447 TRPV6Q9H1D0 765 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 CYP26B1Q9NR63 512 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 ANKEF1Q9NU02 776 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 PCDHA2Q9Y5H9 948 aa17.61■□□□□ 0.41
C9orf78-201ENST00000372447 RNF225M0QZC1 329 aaPredicted RBP17.6■□□□□ 0.41
C9orf78-201ENST00000372447 TREHO43280 583 aa17.6■□□□□ 0.41
C9orf78-201ENST00000372447 B4GALT4O60513 344 aa17.6■□□□□ 0.41
C9orf78-201ENST00000372447 RARRES1P49788 294 aa17.6■□□□□ 0.41
C9orf78-201ENST00000372447 MTF1Q14872 753 aa17.6■□□□□ 0.41
C9orf78-201ENST00000372447 XKR9Q5GH70 373 aa17.6■□□□□ 0.41
C9orf78-201ENST00000372447 HERC4Q5GLZ8 1057 aaPredicted RBP17.6■□□□□ 0.41
C9orf78-201ENST00000372447 SYT10Q6XYQ8 523 aa17.6■□□□□ 0.41
C9orf78-201ENST00000372447 FAM126BQ8IXS8 530 aa17.6■□□□□ 0.41
C9orf78-201ENST00000372447 DBR1Q9UK59 544 aaKnown RBP17.6■□□□□ 0.41
C9orf78-201ENST00000372447 CTIFO43310 598 aaKnown RBP17.59■□□□□ 0.41
C9orf78-201ENST00000372447 PQBP1O60828 265 aaKnown RBP17.59■□□□□ 0.41
C9orf78-201ENST00000372447 GNAT1P11488 350 aa17.59■□□□□ 0.41
C9orf78-201ENST00000372447 KLRC1P26715 233 aa17.59■□□□□ 0.41
C9orf78-201ENST00000372447 KRT9P35527 623 aa17.59■□□□□ 0.41
C9orf78-201ENST00000372447 ETF1P62495 437 aaKnown RBP17.59■□□□□ 0.41
C9orf78-201ENST00000372447 TBC1D8BQ0IIM8 1120 aa17.59■□□□□ 0.41
C9orf78-201ENST00000372447 PTGISQ16647 500 aa17.59■□□□□ 0.41
C9orf78-201ENST00000372447 MIIPQ5JXC2 388 aa17.59■□□□□ 0.41
C9orf78-201ENST00000372447 TRIM65Q6PJ69 517 aa17.59■□□□□ 0.41
C9orf78-201ENST00000372447 RAD9BQ6WBX8 426 aa17.59■□□□□ 0.41
C9orf78-201ENST00000372447 ANKRD33Q7Z3H0 272 aa17.59■□□□□ 0.41
C9orf78-201ENST00000372447 TMTC1Q8IUR5 882 aa17.59■□□□□ 0.41
C9orf78-201ENST00000372447 BHMT2Q9H2M3 363 aa17.59■□□□□ 0.41
C9orf78-201ENST00000372447 ATP11BQ9Y2G3 1177 aa17.59■□□□□ 0.41
C9orf78-201ENST00000372447 COL1A2P08123 1366 aa17.59■□□□□ 0.41
C9orf78-201ENST00000372447 MBLAC1A4D2B0 266 aaPredicted RBP17.58■□□□□ 0.41
C9orf78-201ENST00000372447 KIF20AO95235 890 aa17.58■□□□□ 0.41
C9orf78-201ENST00000372447 EYA4O95677 639 aa17.58■□□□□ 0.41
C9orf78-201ENST00000372447 RTP1P59025 263 aa17.58■□□□□ 0.41
C9orf78-201ENST00000372447 CACNB1Q02641 598 aaPredicted RBP17.58■□□□□ 0.41
C9orf78-201ENST00000372447 TLE2Q04725 743 aa17.58■□□□□ 0.41
C9orf78-201ENST00000372447 RAD51AP2Q09MP3 1159 aa17.58■□□□□ 0.41
C9orf78-201ENST00000372447 GIT2Q14161 759 aa17.58■□□□□ 0.41
C9orf78-201ENST00000372447 MTHFD1LQ6UB35 978 aa17.58■□□□□ 0.41
C9orf78-201ENST00000372447 LRRC55Q6ZSA7 311 aa17.58■□□□□ 0.41
C9orf78-201ENST00000372447 TOX2Q96NM4 488 aa17.58■□□□□ 0.41
C9orf78-201ENST00000372447 DESI2Q9BSY9 194 aa17.58■□□□□ 0.41
C9orf78-201ENST00000372447 TBC1D7Q9P0N9 293 aa17.58■□□□□ 0.41
C9orf78-201ENST00000372447 MROH7Q68CQ1 1323 aa17.58■□□□□ 0.4
C9orf78-201ENST00000372447 PHLPP2Q6ZVD8 1323 aa17.58■□□□□ 0.4
C9orf78-201ENST00000372447 TTC26A0AVF1 554 aa17.58■□□□□ 0.4
C9orf78-201ENST00000372447 C22orf31O95567 290 aa17.58■□□□□ 0.4
C9orf78-201ENST00000372447 CD4P01730 458 aa17.58■□□□□ 0.4
C9orf78-201ENST00000372447 CCDC175P0C221 793 aa17.58■□□□□ 0.4
C9orf78-201ENST00000372447 ZCWPW2Q504Y3 356 aa17.58■□□□□ 0.4
C9orf78-201ENST00000372447 NUP58Q9BVL2 599 aa17.58■□□□□ 0.4
C9orf78-201ENST00000372447 FGFBP2Q9BYJ0 223 aa17.58■□□□□ 0.4
C9orf78-201ENST00000372447 CAPN11Q9UMQ6 739 aa17.58■□□□□ 0.4
C9orf78-201ENST00000372447 VWA3BQ502W6 1294 aa17.57■□□□□ 0.4
C9orf78-201ENST00000372447 FKBP15Q5T1M5 1219 aa17.57■□□□□ 0.4
C9orf78-201ENST00000372447 CYP26C1Q6V0L0 522 aa17.57■□□□□ 0.4
C9orf78-201ENST00000372447 RETREG2Q8NC44 543 aa17.57■□□□□ 0.4
C9orf78-201ENST00000372447 TSC1Q92574 1164 aa17.57■□□□□ 0.4
C9orf78-201ENST00000372447 CCDC43Q96MW1 224 aaKnown RBP17.57■□□□□ 0.4
C9orf78-201ENST00000372447 ERGIC2Q96RQ1 377 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms