RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 NDUFA8P51970 172 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 MRPS35P82673 323 aaKnown RBP14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 TTLL4Q14679 1199 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 SF3B3Q15393 1217 aaKnown RBP14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 TRIM71Q2Q1W2 868 aaKnown RBP14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 C9orf131Q5VYM1 1079 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 TMEM154Q6P9G4 183 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 CHMP6Q96FZ7 201 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 RPAP3Q9H6T3 665 aaPredicted RBP14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 BUB1O43683 1085 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 PDE1BQ01064 536 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 SREBF2Q12772 1141 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 TJAP1Q5JTD0 557 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 PI4K2BQ8TCG2 481 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 SYMPKQ92797 1274 aaKnown RBP14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 PARK7Q99497 189 aaKnown RBP14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 NRXN1Q9ULB1 1477 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 PRPF3O43395 683 aaKnown RBP14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 RPS12P25398 132 aaKnown RBP14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 ABCD1P33897 745 aa14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 BZW1Q7L1Q6 419 aaKnown RBP14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 SRRM1Q8IYB3 904 aaKnown RBP14.98□□□□□ -0.01
RAPGEF1-202ENST00000372190 ARHGEF37A1IGU5 675 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 CCDC78A2IDD5 438 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 HMGCS2P54868 508 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 DENND6AQ8IWF6 608 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 ZBTB10Q96DT7 871 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 C19orf60Q96EN9 201 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 RNPEPQ9H4A4 650 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 TTLL3Q9Y4R7 772 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 ABCB11O95342 1321 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 GAP43P17677 238 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 TRIM28Q13263 835 aaKnown RBP14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 DRP2Q13474 957 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 SPATA1Q5VX52 437 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 ARL10Q8N8L6 244 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 PHLPP2Q6ZVD8 1323 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 CLCN6P51797 869 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 KLC2Q9H0B6 622 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 NRBP1Q9UHY1 535 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 CHMP2BQ9UQN3 213 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 KPNA2P52292 529 aaKnown RBP14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 TGFB2P61812 414 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 HIF1AQ16665 826 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 FAM26FQ5R3K3 315 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 NSUN6Q8TEA1 469 aaKnown RBP14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 ACCSQ96QU6 501 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 ELAC2Q9BQ52 826 aaKnown RBP14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 TMEM245Q9H330 911 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 SLC39A2Q9NP94 309 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 ZNF148Q9UQR1 794 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 MTRF1O75570 445 aaKnown RBP14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 PYGMP11217 842 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 KCNA3P22001 575 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 CRYMQ14894 314 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 ADCK5Q3MIX3 580 aa14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 DCP1AQ9NPI6 582 aaPredicted RBP14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 PRDM5Q9NQX1 630 aaPredicted RBP14.97□□□□□ -0.01
RAPGEF1-202ENST00000372190 ANKRD65E5RJM6 399 aa14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 ZBTB5O15062 677 aa14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 HSPA9P38646 679 aaKnown RBP14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 TMED2Q15363 201 aa14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 ZBTB33Q86T24 672 aa14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 LARP4BQ92615 738 aaKnown RBP14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 ACAD9Q9H845 621 aa14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 MYOZ2Q9NPC6 264 aa14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 PKD2L2Q9NZM6 624 aa14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 ARMCX3Q9UH62 379 aaPredicted RBP14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 MTMR1Q13613 665 aa14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 MTMR2Q13614 643 aa14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 CATSPER3Q86XQ3 398 aa14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 NUDCD1Q96RS6 583 aa14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 PLA2G12BQ9BX93 195 aa14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 ZNF70Q9UC06 446 aaPredicted RBP14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 MEIS1O00470 390 aa14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 NFX1Q12986 1120 aaKnown RBP14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 MAGEF1Q9HAY2 307 aa14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 MID2Q9UJV3 735 aa14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 NOVA2Q9UNW9 492 aaKnown RBP14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 LRRC7Q96NW7 1537 aa14.96□□□□□ -0.01
RAPGEF1-202ENST00000372190 GSNP06396 782 aa14.96□□□□□ -0.02
RAPGEF1-202ENST00000372190 SRGAP2CP0DJJ0 459 aa14.96□□□□□ -0.02
RAPGEF1-202ENST00000372190 PTPREP23469 700 aa14.96□□□□□ -0.02
RAPGEF1-202ENST00000372190 YWHAGP61981 247 aaKnown RBP eCLIP14.96□□□□□ -0.02
RAPGEF1-202ENST00000372190 PATL1Q86TB9 770 aaKnown RBP14.96□□□□□ -0.02
RAPGEF1-202ENST00000372190 MAML1Q92585 1016 aa14.96□□□□□ -0.02
RAPGEF1-202ENST00000372190 AK8Q96MA6 479 aa14.96□□□□□ -0.02
RAPGEF1-202ENST00000372190 IPO11Q9UI26 975 aaKnown RBP14.96□□□□□ -0.02
RAPGEF1-202ENST00000372190 TBKBP1A7MCY6 615 aa14.96□□□□□ -0.02
RAPGEF1-202ENST00000372190 GTPBP6O43824 516 aaPredicted RBP14.96□□□□□ -0.02
RAPGEF1-202ENST00000372190 STAM2O75886 525 aa14.96□□□□□ -0.02
RAPGEF1-202ENST00000372190 IFNA8P32881 189 aa14.96□□□□□ -0.02
RAPGEF1-202ENST00000372190 JAK3P52333 1124 aa14.96□□□□□ -0.02
RAPGEF1-202ENST00000372190 DCLK2Q8N568 766 aa14.96□□□□□ -0.02
RAPGEF1-202ENST00000372190 NLRP4Q96MN2 994 aa14.96□□□□□ -0.02
RAPGEF1-202ENST00000372190 SOX13Q9UN79 622 aa14.96□□□□□ -0.02
RAPGEF1-202ENST00000372190 CLIC4Q9Y696 253 aa14.96□□□□□ -0.02
RAPGEF1-202ENST00000372190 C16orf96A6NNT2 1141 aa14.95□□□□□ -0.02
RAPGEF1-202ENST00000372190 DLGAP3O95886 979 aa14.95□□□□□ -0.02
RAPGEF1-202ENST00000372190 AP3B2Q13367 1082 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms