RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 PCNX4Q63HM2 1172 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 CCSAPQ6IQ19 270 aaPredicted RBP15.41■□□□□ 0.06
LDB3-204ENST00000372066 C1orf186Q6ZWK4 172 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 LRRN4CLQ8ND94 238 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 GLT1D1Q96MS3 346 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 RUSC1Q9BVN2 902 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 COL25A1Q9BXS0 654 aaPredicted RBP15.41■□□□□ 0.06
LDB3-204ENST00000372066 TTYH1Q9H313 450 aaPredicted RBP15.41■□□□□ 0.06
LDB3-204ENST00000372066 ABHD16BQ9H3Z7 469 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 LUC7LQ9NQ29 371 aaKnown RBP15.41■□□□□ 0.06
LDB3-204ENST00000372066 HOMER2Q9NSB8 354 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 FAM207AQ9NSI2 230 aaPredicted RBP15.41■□□□□ 0.06
LDB3-204ENST00000372066 OGFRQ9NZT2 677 aa15.41■□□□□ 0.06
LDB3-204ENST00000372066 TUBBP07437 444 aa15.4■□□□□ 0.06
LDB3-204ENST00000372066 GUCY2CP25092 1073 aa15.4■□□□□ 0.06
LDB3-204ENST00000372066 OAZ1P54368 228 aa15.4■□□□□ 0.06
LDB3-204ENST00000372066 IRX5P78411 483 aaPredicted RBP15.4■□□□□ 0.06
LDB3-204ENST00000372066 KIF5AQ12840 1032 aa15.4■□□□□ 0.06
LDB3-204ENST00000372066 XRRA1Q6P2D8 792 aa15.4■□□□□ 0.06
LDB3-204ENST00000372066 TPH2Q8IWU9 490 aa15.4■□□□□ 0.06
LDB3-204ENST00000372066 PCSK9Q8NBP7 692 aaKnown RBP15.4■□□□□ 0.06
LDB3-204ENST00000372066 MAFAQ8NHW3 353 aaPredicted RBP15.4■□□□□ 0.06
LDB3-204ENST00000372066 CLEC4DQ8WXI8 215 aa15.4■□□□□ 0.06
LDB3-204ENST00000372066 MYLIPQ8WY64 445 aa15.4■□□□□ 0.06
LDB3-204ENST00000372066 UIMC1Q96RL1 719 aa15.4■□□□□ 0.06
LDB3-204ENST00000372066 MKNK1Q9BUB5 465 aa15.4■□□□□ 0.06
LDB3-204ENST00000372066 DEF6Q9H4E7 631 aa15.4■□□□□ 0.06
LDB3-204ENST00000372066 PARVGQ9HBI0 331 aa15.4■□□□□ 0.06
LDB3-204ENST00000372066 PLCB1Q9NQ66 1216 aa15.4■□□□□ 0.06
LDB3-204ENST00000372066 RGL1Q9NZL6 768 aa15.4■□□□□ 0.06
LDB3-204ENST00000372066 ARMCX3Q9UH62 379 aaPredicted RBP15.4■□□□□ 0.06
LDB3-204ENST00000372066 DDX41Q9UJV9 622 aaKnown RBP15.4■□□□□ 0.06
LDB3-204ENST00000372066 MYO6Q9UM54 1294 aa15.4■□□□□ 0.06
LDB3-204ENST00000372066 GUCA1BQ9UMX6 200 aa15.4■□□□□ 0.06
LDB3-204ENST00000372066 UBIAD1Q9Y5Z9 338 aa15.4■□□□□ 0.06
LDB3-204ENST00000372066 WDR81Q562E7 1941 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 A0A0U1RQJ8 604 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 LRRC53A6NM62 1247 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 ATP8B1O43520 1251 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 GCNT3O95395 438 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 EPB41P11171 864 aaKnown RBP15.39■□□□□ 0.05
LDB3-204ENST00000372066 KIF11P52732 1056 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 CHMP4BP1P59074 171 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 AMPD2Q01433 879 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 RAD51AP2Q09MP3 1159 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 KCNMA1Q12791 1236 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 ALCAMQ13740 583 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 CTTNQ14247 550 aaKnown RBP15.39■□□□□ 0.05
LDB3-204ENST00000372066 GNASQ5JWF2 1037 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.39■□□□□ 0.05
LDB3-204ENST00000372066 ARMCX2Q7L311 632 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 GOLGA5Q8TBA6 731 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 ATRIPQ8WXE1 791 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 RPGRIP1Q96KN7 1286 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 AGBL1Q96MI9 1066 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 TIPINQ9BVW5 301 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 UNC45AQ9H3U1 944 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 ARHGAP20Q9P2F6 1191 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 DAAM1Q9Y4D1 1078 aa15.39■□□□□ 0.05
LDB3-204ENST00000372066 GTPBP10A4D1E9 387 aaKnown RBP15.38■□□□□ 0.05
LDB3-204ENST00000372066 NKRFO15226 690 aaKnown RBP eCLIP15.38■□□□□ 0.05
LDB3-204ENST00000372066 TIMP1P01033 207 aa15.38■□□□□ 0.05
LDB3-204ENST00000372066 NR3C1P04150 777 aa15.38■□□□□ 0.05
LDB3-204ENST00000372066 SERPING1P05155 500 aa15.38■□□□□ 0.05
LDB3-204ENST00000372066 ASGR1P07306 291 aa15.38■□□□□ 0.05
LDB3-204ENST00000372066 MYBP10242 640 aa15.38■□□□□ 0.05
LDB3-204ENST00000372066 ARP10275 920 aa15.38■□□□□ 0.05
LDB3-204ENST00000372066 MAPTP10636 758 aaKnown RBP15.38■□□□□ 0.05
LDB3-204ENST00000372066 CST5P28325 142 aaPredicted RBP15.38■□□□□ 0.05
LDB3-204ENST00000372066 CASP5P51878 434 aa15.38■□□□□ 0.05
LDB3-204ENST00000372066 CNTN2Q02246 1040 aa15.38■□□□□ 0.05
LDB3-204ENST00000372066 SFMBT2Q5VUG0 894 aa15.38■□□□□ 0.05
LDB3-204ENST00000372066 RRAGAQ7L523 313 aa15.38■□□□□ 0.05
LDB3-204ENST00000372066 FGD4Q96M96 766 aa15.38■□□□□ 0.05
LDB3-204ENST00000372066 LSM14BQ9BX40 385 aaKnown RBP15.38■□□□□ 0.05
LDB3-204ENST00000372066 JADE2Q9NQC1 790 aa15.38■□□□□ 0.05
LDB3-204ENST00000372066 TBC1D22BQ9NU19 505 aa15.38■□□□□ 0.05
LDB3-204ENST00000372066 FBXL5Q9UKA1 691 aa15.38■□□□□ 0.05
LDB3-204ENST00000372066 ASTN1O14525 1302 aa15.38■□□□□ 0.05
LDB3-204ENST00000372066 LAMA2P24043 3122 aaKnown RBP15.37■□□□□ 0.05
LDB3-204ENST00000372066 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.37■□□□□ 0.05
LDB3-204ENST00000372066 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.37■□□□□ 0.05
LDB3-204ENST00000372066 ARHGEF35A5YM69 484 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 RBAK-RBAKDNI3L0D1 243 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 EPHB6O15197 1021 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 PJA2O43164 708 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 ADCY6O43306 1168 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 CHMP2AO43633 222 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 AKR1B10O60218 316 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 LYPLA2O95372 231 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 AFPP02771 609 aaKnown RBP15.37■□□□□ 0.05
LDB3-204ENST00000372066 ANXA13P27216 316 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 CDK7P50613 346 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 GJA9P57773 515 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 CKAP4Q07065 602 aaKnown RBP15.37■□□□□ 0.05
LDB3-204ENST00000372066 KCNH2Q12809 1159 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 MYBPC2Q14324 1141 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 BMS1Q14692 1282 aaKnown RBP15.37■□□□□ 0.05
LDB3-204ENST00000372066 TEX35Q5T0J7 233 aa15.37■□□□□ 0.05
LDB3-204ENST00000372066 PAPD7Q5XG87 772 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms