RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 DNAAF5Q86Y56 855 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 C12orf56Q8IXR9 622 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 XXYLT1Q8NBI6 393 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 TMEM161BQ8NDZ6 487 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 DNERQ8NFT8 737 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 BBXQ8WY36 941 aaPredicted RBP21.59■■□□□ 1.05
LHX3-202ENST00000371748 NOX5Q96PH1 765 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 PAGR1Q9BTK6 254 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 PDE11AQ9HCR9 933 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 DNAJC12Q9UKB3 198 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 L1RE1Q9UN81 338 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 BZW2Q9Y6E2 419 aaKnown RBP21.59■■□□□ 1.05
LHX3-202ENST00000371748 POTEB2H3BUK9 544 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 PRKCIP41743 596 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 ALDH5A1P51649 535 aaPredicted RBP21.59■■□□□ 1.05
LHX3-202ENST00000371748 SMTNP53814 917 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 SLC20A2Q08357 652 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 INTS8Q75QN2 995 aaKnown RBP21.59■■□□□ 1.05
LHX3-202ENST00000371748 NCAPG2Q86XI2 1143 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 RIOX2Q8IUF8 465 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 KMT5AQ9NQR1 393 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 TBX20Q9UMR3 447 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 SNX12Q9UMY4 172 aa21.59■■□□□ 1.05
LHX3-202ENST00000371748 EMSYQ7Z589 1322 aa21.58■■□□□ 1.05
LHX3-202ENST00000371748 GOLGA8IPA6NC78 632 aa21.58■■□□□ 1.05
LHX3-202ENST00000371748 GOLGA8JA6NMD2 632 aa21.58■■□□□ 1.05
LHX3-202ENST00000371748 ANKRD63C9JTQ0 380 aa21.58■■□□□ 1.05
LHX3-202ENST00000371748 NCK2O43639 380 aa21.58■■□□□ 1.05
LHX3-202ENST00000371748 DKC1O60832 514 aaKnown RBP eCLIP21.58■■□□□ 1.05
LHX3-202ENST00000371748 EIF3JO75822 258 aaKnown RBP21.58■■□□□ 1.05
LHX3-202ENST00000371748 VAMP7P51809 220 aa21.58■■□□□ 1.05
LHX3-202ENST00000371748 ZNF526Q8TF50 670 aaPredicted RBP21.58■■□□□ 1.05
LHX3-202ENST00000371748 SYT17Q9BSW7 474 aa21.58■■□□□ 1.05
LHX3-202ENST00000371748 SUGCTQ9HAC7 445 aa21.58■■□□□ 1.05
LHX3-202ENST00000371748 PFASO15067 1338 aa21.58■■□□□ 1.04
LHX3-202ENST00000371748 A0A0G2JLL6 359 aaPredicted RBP21.58■■□□□ 1.04
LHX3-202ENST00000371748 DENND3A2RUS2 1198 aa21.58■■□□□ 1.04
LHX3-202ENST00000371748 IRX3P78415 501 aaPredicted RBP21.58■■□□□ 1.04
LHX3-202ENST00000371748 TTLL12Q14166 644 aaPredicted RBP21.58■■□□□ 1.04
LHX3-202ENST00000371748 MIS18BP1Q6P0N0 1132 aa21.58■■□□□ 1.04
LHX3-202ENST00000371748 HDXQ7Z353 690 aa21.58■■□□□ 1.04
LHX3-202ENST00000371748 PRRT2Q7Z6L0 340 aaPredicted RBP21.58■■□□□ 1.04
LHX3-202ENST00000371748 RNF10Q8N5U6 811 aaKnown RBP21.58■■□□□ 1.04
LHX3-202ENST00000371748 MSL3Q8N5Y2 521 aaKnown RBP21.58■■□□□ 1.04
LHX3-202ENST00000371748 CAGE1Q8TC20 777 aa21.58■■□□□ 1.04
LHX3-202ENST00000371748 PLEKHO2Q8TD55 490 aa21.58■■□□□ 1.04
LHX3-202ENST00000371748 PSMB7Q99436 277 aa21.58■■□□□ 1.04
LHX3-202ENST00000371748 SPATC1LQ9H0A9 340 aa21.58■■□□□ 1.04
LHX3-202ENST00000371748 ABCB6Q9NP58 842 aa21.58■■□□□ 1.04
LHX3-202ENST00000371748 F8VZ95 297 aa21.57■■□□□ 1.04
LHX3-202ENST00000371748 TULP1O00294 542 aaPredicted RBP21.57■■□□□ 1.04
LHX3-202ENST00000371748 PDE2AO00408 941 aaPredicted RBP21.57■■□□□ 1.04
LHX3-202ENST00000371748 SUPT20HL2P0C7V6 817 aa21.57■■□□□ 1.04
LHX3-202ENST00000371748 STAT1P42224 750 aa21.57■■□□□ 1.04
LHX3-202ENST00000371748 PPATQ06203 517 aa21.57■■□□□ 1.04
LHX3-202ENST00000371748 PPP3CAQ08209 521 aa21.57■■□□□ 1.04
LHX3-202ENST00000371748 DRAP1Q14919 205 aaPredicted RBP21.57■■□□□ 1.04
LHX3-202ENST00000371748 NAB2Q15742 525 aa21.57■■□□□ 1.04
LHX3-202ENST00000371748 NFRKBQ6P4R8 1299 aa21.57■■□□□ 1.04
LHX3-202ENST00000371748 SLC17A8Q8NDX2 589 aa21.57■■□□□ 1.04
LHX3-202ENST00000371748 TMEM174Q8WUU8 243 aa21.57■■□□□ 1.04
LHX3-202ENST00000371748 KIFAP3Q92845 792 aa21.57■■□□□ 1.04
LHX3-202ENST00000371748 CDCA5Q96FF9 252 aa21.57■■□□□ 1.04
LHX3-202ENST00000371748 MAF1Q9H063 256 aa21.57■■□□□ 1.04
LHX3-202ENST00000371748 R3HDMLQ9H3Y0 253 aa21.57■■□□□ 1.04
LHX3-202ENST00000371748 XPNPEP1Q9NQW7 623 aa21.57■■□□□ 1.04
LHX3-202ENST00000371748 CYP26B1Q9NR63 512 aa21.57■■□□□ 1.04
LHX3-202ENST00000371748 EVI5O60447 810 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 LRRN2O75325 713 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 ADSSP30520 456 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 GCLMP48507 274 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 LMAN1P49257 510 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 TUBB4BP68371 445 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 MTERF2Q49AM1 385 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 RNF216Q9NWF9 866 aaPredicted RBP21.56■■□□□ 1.04
LHX3-202ENST00000371748 APEX2Q9UBZ4 518 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 FBXO40Q9UH90 709 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 NAGPAQ9UK23 515 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 DGAT1O75907 488 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 ADRB2P07550 413 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 SOX5P35711 763 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 CKAP4Q07065 602 aaKnown RBP21.56■■□□□ 1.04
LHX3-202ENST00000371748 C1orf220Q5T0J3 134 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 ERO1BQ86YB8 467 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 MAP4K3Q8IVH8 894 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 PROCA1Q8NCQ7 364 aaPredicted RBP21.56■■□□□ 1.04
LHX3-202ENST00000371748 COG1Q8WTW3 980 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 SAAL1Q96ER3 474 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 STK33Q9BYT3 514 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 GPR88Q9GZN0 384 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 PDLIM7Q9NR12 457 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 EXOC7Q9UPT5 735 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 ADGRA3Q8IWK6 1321 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 IGSF9BQ9UPX0 1349 aa21.56■■□□□ 1.04
LHX3-202ENST00000371748 FERP16591 822 aa21.55■■□□□ 1.04
LHX3-202ENST00000371748 CXCR5P32302 372 aa21.55■■□□□ 1.04
LHX3-202ENST00000371748 ICAM3P32942 547 aa21.55■■□□□ 1.04
LHX3-202ENST00000371748 VSNL1P62760 191 aa21.55■■□□□ 1.04
LHX3-202ENST00000371748 ARHGAP44Q17R89 818 aa21.55■■□□□ 1.04
LHX3-202ENST00000371748 PHLDB3Q6NSJ2 640 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms