RNA–Protein interactions for RNA: ENST00000371539.7

SALL4-202, Transcript of spalt like transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene SALL4, Length 1,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4-202ENST00000371539 CDC42EP1Q00587 391 aa11.78□□□□□ -0.52
SALL4-202ENST00000371539 TOB2Q14106 344 aaPredicted RBP11.78□□□□□ -0.52
SALL4-202ENST00000371539 RARS2Q5T160 578 aaKnown RBP11.78□□□□□ -0.52
SALL4-202ENST00000371539 TWF2Q6IBS0 349 aaKnown RBP11.78□□□□□ -0.52
SALL4-202ENST00000371539 KIAA1841Q6NSI8 718 aa11.78□□□□□ -0.52
SALL4-202ENST00000371539 CES5AQ6NT32 575 aa11.78□□□□□ -0.52
SALL4-202ENST00000371539 MOXD1Q6UVY6 613 aa11.78□□□□□ -0.52
SALL4-202ENST00000371539 DDX53Q86TM3 631 aaKnown RBP11.78□□□□□ -0.52
SALL4-202ENST00000371539 KSR1Q8IVT5 923 aa11.78□□□□□ -0.52
SALL4-202ENST00000371539 UBALD2Q8IYN6 164 aa11.78□□□□□ -0.52
SALL4-202ENST00000371539 DAGLBQ8NCG7 672 aa11.78□□□□□ -0.52
SALL4-202ENST00000371539 IFT122Q9HBG6 1241 aa11.78□□□□□ -0.52
SALL4-202ENST00000371539 FAM105AQ9NUU6 356 aa11.78□□□□□ -0.52
SALL4-202ENST00000371539 SUCLA2Q9P2R7 463 aaPredicted RBP11.78□□□□□ -0.52
SALL4-202ENST00000371539 DNAJB4Q9UDY4 337 aa11.78□□□□□ -0.52
SALL4-202ENST00000371539 PIN4Q9Y237 131 aaKnown RBP11.78□□□□□ -0.52
SALL4-202ENST00000371539 PTPRZ1P23471 2315 aaPredicted RBP11.77□□□□□ -0.52
SALL4-202ENST00000371539 PLXNA3P51805 1871 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 DENND4AQ7Z401 1863 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.77□□□□□ -0.53
SALL4-202ENST00000371539 EML1O00423 815 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 SLC37A4O43826 429 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 ST18O60284 1047 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 ASGR2P07307 311 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 SFPQP23246 707 aaKnown RBP eCLIP11.77□□□□□ -0.53
SALL4-202ENST00000371539 SLC11A1P49279 550 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 AFF1P51825 1210 aaKnown RBP11.77□□□□□ -0.53
SALL4-202ENST00000371539 NUBP1P53384 320 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 MTMR3Q13615 1198 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 PTPN14Q15678 1187 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 LONRF3Q496Y0 759 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 NOMO2Q5JPE7 1267 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 PLA2G4FQ68DD2 849 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 GLB1LQ6UWU2 654 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 AGMOQ6ZNB7 445 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 ZBTB33Q86T24 672 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 RHPN2Q8IUC4 686 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 ZDHHC14Q8IZN3 488 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 TMEM105Q8N8V8 129 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 AIFM3Q96NN9 605 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 C22orf23Q9BZE7 217 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 AGPAT5Q9NUQ2 364 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 DZANK1Q9NVP4 752 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 WRAP73Q9P2S5 460 aaPredicted RBP11.77□□□□□ -0.53
SALL4-202ENST00000371539 VAV3Q9UKW4 847 aa11.77□□□□□ -0.53
SALL4-202ENST00000371539 SPTBN4Q9H254 2564 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 DDX11L8A8MPP1 907 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 H0Y858 1186 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 GALR2O43603 387 aaPredicted RBP11.76□□□□□ -0.53
SALL4-202ENST00000371539 LILRB3O75022 631 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 SKIP12755 728 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 DNM2P50570 870 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 RAB27AP51159 221 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 PSMC5P62195 406 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 C1QBPQ07021 282 aaKnown RBP11.76□□□□□ -0.53
SALL4-202ENST00000371539 UBXN11Q5T124 520 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 MRPL10Q7Z7H8 261 aaKnown RBP11.76□□□□□ -0.53
SALL4-202ENST00000371539 ZNF280BQ86YH2 543 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 BLIDQ8IZY5 108 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
SALL4-202ENST00000371539 TDRD5Q8NAT2 981 aaKnown RBP11.76□□□□□ -0.53
SALL4-202ENST00000371539 NLRP4Q96MN2 994 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 INO80BQ9C086 356 aaPredicted RBP11.76□□□□□ -0.53
SALL4-202ENST00000371539 MINDY3Q9H8M7 445 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 ZSWIM6Q9HCJ5 1215 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 KCNMB3Q9NPA1 279 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 CYP26B1Q9NR63 512 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 USTQ9Y2C2 406 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 INPP5FQ9Y2H2 1132 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 PCDHB2Q9Y5E7 798 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 GVINP1Q7Z2Y8 2422 aa11.76□□□□□ -0.53
SALL4-202ENST00000371539 WDR87Q6ZQQ6 2873 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 FAM186AA6NE01 2351 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 CARNS1A5YM72 827 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 PROB1E7EW31 1015 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 GFRA3O60609 400 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 DDHD2O94830 711 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 DEXIO95424 95 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 PSMA5P28066 241 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 HOXA11P31270 313 aaPredicted RBP11.75□□□□□ -0.53
SALL4-202ENST00000371539 NPEPPSP55786 919 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 SSRP1Q08945 709 aaKnown RBP11.75□□□□□ -0.53
SALL4-202ENST00000371539 PPP2R5CQ13362 524 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 GIT2Q14161 759 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 BMS1Q14692 1282 aaKnown RBP11.75□□□□□ -0.53
SALL4-202ENST00000371539 ATAT1Q5SQI0 421 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 TMC5Q6UXY8 1006 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 RUFY3Q7L099 469 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 CATSPER4Q7RTX7 472 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 GPR149Q86SP6 731 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 TRIM22Q8IYM9 498 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 FAM177A1Q8N128 213 aaPredicted RBP11.75□□□□□ -0.53
SALL4-202ENST00000371539 ATOH1Q92858 354 aaPredicted RBP11.75□□□□□ -0.53
SALL4-202ENST00000371539 IRF2BPLQ9H1B7 796 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 DHX33Q9H6R0 707 aaKnown RBP11.75□□□□□ -0.53
SALL4-202ENST00000371539 LIMD1Q9UGP4 676 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 DDX25Q9UHL0 483 aaKnown RBP11.75□□□□□ -0.53
SALL4-202ENST00000371539 COL4A3BPQ9Y5P4 624 aa11.75□□□□□ -0.53
SALL4-202ENST00000371539 EFEMP2O95967 443 aa11.74□□□□□ -0.53
SALL4-202ENST00000371539 CNPP09543 421 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms