RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 MEGF6O75095 1541 aa15.77■□□□□ 0.11
NDC1-201ENST00000371429 NNMTP40261 264 aa15.77■□□□□ 0.11
NDC1-201ENST00000371429 GPC5P78333 572 aa15.77■□□□□ 0.11
NDC1-201ENST00000371429 SHC4Q6S5L8 630 aa15.77■□□□□ 0.11
NDC1-201ENST00000371429 FAM71BQ8TC56 605 aa15.77■□□□□ 0.11
NDC1-201ENST00000371429 PGBD4Q96DM1 585 aa15.77■□□□□ 0.11
NDC1-201ENST00000371429 HPCAL4Q9UM19 191 aa15.77■□□□□ 0.11
NDC1-201ENST00000371429 EMSYQ7Z589 1322 aa15.77■□□□□ 0.11
NDC1-201ENST00000371429 SPDYE2BA6NHP3 402 aa15.77■□□□□ 0.11
NDC1-201ENST00000371429 LRRC53A6NM62 1247 aa15.77■□□□□ 0.11
NDC1-201ENST00000371429 SPDYE6P0CI01 402 aa15.77■□□□□ 0.11
NDC1-201ENST00000371429 MSH2P43246 934 aa15.77■□□□□ 0.11
NDC1-201ENST00000371429 SMAP1Q8IYB5 467 aaPredicted RBP15.77■□□□□ 0.11
NDC1-201ENST00000371429 PDIK1LQ8N165 341 aa15.77■□□□□ 0.11
NDC1-201ENST00000371429 RABGGTAQ92696 567 aa15.77■□□□□ 0.11
NDC1-201ENST00000371429 NUDCD1Q96RS6 583 aa15.77■□□□□ 0.11
NDC1-201ENST00000371429 ATP8A1Q9Y2Q0 1164 aa15.77■□□□□ 0.11
NDC1-201ENST00000371429 KDM4FA0A1W2PPD8 638 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 FAM205CA6NFA0 338 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 F8W8V4 182 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 TJP3O95049 919 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 ATP1A2P50993 1020 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 PSMC1P62191 440 aaKnown RBP15.76■□□□□ 0.11
NDC1-201ENST00000371429 DRAP1Q14919 205 aaPredicted RBP15.76■□□□□ 0.11
NDC1-201ENST00000371429 TTC30AQ86WT1 665 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 TNIP3Q96KP6 325 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 GBA2Q9HCG7 927 aaPredicted RBP15.76■□□□□ 0.11
NDC1-201ENST00000371429 FBXO28Q9NVF7 368 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 GOLGA8KD6RF30 607 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 KIAA0391O15091 583 aaKnown RBP15.76■□□□□ 0.11
NDC1-201ENST00000371429 NOL3O60936 208 aaKnown RBP15.76■□□□□ 0.11
NDC1-201ENST00000371429 SEMA3FQ13275 785 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 ENOSF1Q7L5Y1 443 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 GLT1D1Q96MS3 346 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 EFCC1Q9HA90 598 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.76■□□□□ 0.11
NDC1-201ENST00000371429 UPP2O95045 317 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 ZWINTO95229 277 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 CYP2C9P11712 490 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 RPS6P62753 249 aaKnown RBP15.76■□□□□ 0.11
NDC1-201ENST00000371429 WDR72Q3MJ13 1102 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 RBM41Q96IZ5 413 aaKnown RBP15.76■□□□□ 0.11
NDC1-201ENST00000371429 MXRA8Q9BRK3 442 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 STXBP3O00186 592 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 RPS6KA5O75582 802 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 LMBRD2Q68DH5 695 aaPredicted RBP15.76■□□□□ 0.11
NDC1-201ENST00000371429 XRRA1Q6P2D8 792 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 PCGF5Q86SE9 256 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 LRRC8CQ8TDW0 803 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 ERAP1Q9NZ08 941 aa15.76■□□□□ 0.11
NDC1-201ENST00000371429 PPARGP37231 505 aaPredicted RBP15.75■□□□□ 0.11
NDC1-201ENST00000371429 PRKCEQ02156 737 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 APBA1Q02410 837 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 TMEM62Q0P6H9 643 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 KLHL8Q9P2G9 620 aaPredicted RBP15.75■□□□□ 0.11
NDC1-201ENST00000371429 PDXKO00764 312 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 ZNF500O60304 480 aaPredicted RBP15.75■□□□□ 0.11
NDC1-201ENST00000371429 RIT2Q99578 217 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 NEMP1O14524 444 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 ATXN8OSP0DMR3 200 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 RASSF2P50749 326 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 ANTXR2P58335 489 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 COG7P83436 770 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 ASPHQ12797 758 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 DGKDQ16760 1214 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 ACER1Q8TDN7 264 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 TRIM9Q9C026 710 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 MIF4GDA9UHW6 222 aaKnown RBP15.75■□□□□ 0.11
NDC1-201ENST00000371429 SMARCA1P28370 1054 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 INPP5BP32019 993 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 MMP14P50281 582 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 FAM117BQ6P1L5 589 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 MAP3K14Q99558 947 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 BCL2L12Q9HB09 334 aa15.75■□□□□ 0.11
NDC1-201ENST00000371429 ZMYND10O75800 440 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 MOCS2O96007 188 aaPredicted RBP15.74■□□□□ 0.11
NDC1-201ENST00000371429 EMC2Q15006 297 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 RNF180Q86T96 592 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 CACNA2D3Q8IZS8 1091 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 MOV10L1Q9BXT6 1211 aaKnown RBP15.74■□□□□ 0.11
NDC1-201ENST00000371429 BCAP29Q9UHQ4 241 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 AGAP1Q9UPQ3 857 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 CLGNO14967 610 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 ASAP2O43150 1006 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 TADA2AO75478 443 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 FGGP02679 453 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 KPNA2P52292 529 aaKnown RBP15.74■□□□□ 0.11
NDC1-201ENST00000371429 LAMC2Q13753 1193 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 PDCD6IPQ8WUM4 868 aaKnown RBP15.74■□□□□ 0.11
NDC1-201ENST00000371429 AP1M1Q9BXS5 423 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 NUF2Q9BZD4 464 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 PCSK1NQ9UHG2 260 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 LCMT1Q9UIC8 334 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 FBXO2Q9UK22 296 aaPredicted RBP15.74■□□□□ 0.11
NDC1-201ENST00000371429 HEY1Q9Y5J3 304 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 NPHP3-ACAD11A0A0J9YXS1 232 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 CREB3O43889 395 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 APOEP02649 317 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 RFC5P40937 340 aa15.74■□□□□ 0.11
NDC1-201ENST00000371429 SPDYE1Q8NFV5 336 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms