RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 ESYT3A0FGR9 886 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 ZSCAN5CA6NGD5 496 aaPredicted RBP31.39■■■□□ 2.62
SSBP3-204ENST00000371320 FOXN3O00409 490 aaPredicted RBP31.39■■■□□ 2.62
SSBP3-204ENST00000371320 VWA5AO00534 786 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 FDX1P10109 184 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 SFNP31947 248 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 PEX3P56589 373 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 KRT76Q01546 638 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 KIF22Q14807 665 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 CTNNBL1Q8WYA6 563 aaPredicted RBP31.39■■■□□ 2.62
SSBP3-204ENST00000371320 IWS1Q96ST2 819 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 NCANO14594 1321 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 SLC16A4O15374 487 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 P4HA2O15460 535 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 LRRN2O75325 713 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 CCNE2O96020 404 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 ACTN2P35609 894 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 PPP3CAQ08209 521 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 XKR9Q5GH70 373 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 SAMD7Q7Z3H4 446 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 SLC35G2Q8TBE7 412 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 RFFLQ8WZ73 363 aa31.39■■■□□ 2.62
SSBP3-204ENST00000371320 UBE2TQ9NPD8 197 aaPredicted RBP31.39■■■□□ 2.62
SSBP3-204ENST00000371320 PGRMC1O00264 195 aaKnown RBP31.38■■■□□ 2.61
SSBP3-204ENST00000371320 RAD51CO43502 376 aa31.38■■■□□ 2.61
SSBP3-204ENST00000371320 ZBTB48P10074 688 aaPredicted RBP31.38■■■□□ 2.61
SSBP3-204ENST00000371320 SNRPFP62306 86 aaKnown RBP31.38■■■□□ 2.61
SSBP3-204ENST00000371320 ZSCAN26Q16670 478 aa31.38■■■□□ 2.61
SSBP3-204ENST00000371320 FAM102BQ5T8I3 360 aa31.38■■■□□ 2.61
SSBP3-204ENST00000371320 ALS2CLQ60I27 953 aa31.38■■■□□ 2.61
SSBP3-204ENST00000371320 NT5DC3Q86UY8 548 aa31.38■■■□□ 2.61
SSBP3-204ENST00000371320 TSEN2Q8NCE0 465 aaKnown RBP31.38■■■□□ 2.61
SSBP3-204ENST00000371320 SCFD2Q8WU76 684 aa31.38■■■□□ 2.61
SSBP3-204ENST00000371320 ATG4CQ96DT6 458 aa31.38■■■□□ 2.61
SSBP3-204ENST00000371320 ANKEF1Q9NU02 776 aa31.38■■■□□ 2.61
SSBP3-204ENST00000371320 SEPT11Q9NVA2 429 aaKnown RBP31.38■■■□□ 2.61
SSBP3-204ENST00000371320 HACL1Q9UJ83 578 aa31.38■■■□□ 2.61
SSBP3-204ENST00000371320 FER1L6Q2WGJ9 1857 aa31.38■■■□□ 2.61
SSBP3-204ENST00000371320 GCLMP48507 274 aa31.37■■■□□ 2.61
SSBP3-204ENST00000371320 PLA2G4FQ68DD2 849 aa31.37■■■□□ 2.61
SSBP3-204ENST00000371320 MICALL2Q8IY33 904 aa31.37■■■□□ 2.61
SSBP3-204ENST00000371320 BUD13Q9BRD0 619 aaKnown RBP eCLIP31.37■■■□□ 2.612e-7■□□□□ 10
SSBP3-204ENST00000371320 OSGEPQ9NPF4 335 aa31.37■■■□□ 2.61
SSBP3-204ENST00000371320 ABCB4P21439 1286 aa31.37■■■□□ 2.61
SSBP3-204ENST00000371320 NCKAP1LP55160 1127 aa31.37■■■□□ 2.61
SSBP3-204ENST00000371320 NBPF12Q5TAG4 269 aaPredicted RBP31.37■■■□□ 2.61
SSBP3-204ENST00000371320 LEKR1Q6ZMV7 388 aa31.37■■■□□ 2.61
SSBP3-204ENST00000371320 SLC17A8Q8NDX2 589 aa31.37■■■□□ 2.61
SSBP3-204ENST00000371320 CALR3Q96L12 384 aaKnown RBP31.37■■■□□ 2.61
SSBP3-204ENST00000371320 RNF146Q9NTX7 359 aa31.37■■■□□ 2.61
SSBP3-204ENST00000371320 AMFRQ9UKV5 643 aa31.37■■■□□ 2.61
SSBP3-204ENST00000371320 MAPK13O15264 365 aa31.36■■■□□ 2.61
SSBP3-204ENST00000371320 HSF2BPO75031 334 aa31.36■■■□□ 2.61
SSBP3-204ENST00000371320 BAATQ14032 418 aaPredicted RBP31.36■■■□□ 2.61
SSBP3-204ENST00000371320 TBC1D10BQ4KMP7 808 aaPredicted RBP31.36■■■□□ 2.61
SSBP3-204ENST00000371320 CASKIN2Q8WXE0 1202 aa31.36■■■□□ 2.61
SSBP3-204ENST00000371320 VTI1AQ96AJ9 217 aa31.36■■■□□ 2.61
SSBP3-204ENST00000371320 BCS1LQ9Y276 419 aa31.36■■■□□ 2.61
SSBP3-204ENST00000371320 NOC2LQ9Y3T9 749 aaKnown RBP31.36■■■□□ 2.61
SSBP3-204ENST00000371320 EPC2Q52LR7 807 aa31.36■■■□□ 2.61
SSBP3-204ENST00000371320 C1orf220Q5T0J3 134 aa31.36■■■□□ 2.61
SSBP3-204ENST00000371320 ZSWIM2Q8NEG5 633 aa31.36■■■□□ 2.61
SSBP3-204ENST00000371320 HES6Q96HZ4 224 aa31.36■■■□□ 2.61
SSBP3-204ENST00000371320 WNK4Q96J92 1243 aa31.36■■■□□ 2.61
SSBP3-204ENST00000371320 AGPAT1Q99943 283 aa31.36■■■□□ 2.61
SSBP3-204ENST00000371320 RIPK3Q9Y572 518 aa31.36■■■□□ 2.61
SSBP3-204ENST00000371320 NFKBIEO00221 500 aa31.35■■■□□ 2.61
SSBP3-204ENST00000371320 OPA1O60313 960 aa31.35■■■□□ 2.61
SSBP3-204ENST00000371320 BUB1BO60566 1050 aaPredicted RBP31.35■■■□□ 2.61
SSBP3-204ENST00000371320 GMPSP49915 693 aaPredicted RBP31.35■■■□□ 2.61
SSBP3-204ENST00000371320 XRRA1Q6P2D8 792 aa31.35■■■□□ 2.61
SSBP3-204ENST00000371320 ARHGEF19Q8IW93 802 aa31.35■■■□□ 2.61
SSBP3-204ENST00000371320 RUFY1Q96T51 708 aa31.35■■■□□ 2.61
SSBP3-204ENST00000371320 CCND2P30279 289 aa31.34■■■□□ 2.61
SSBP3-204ENST00000371320 BACE1P56817 501 aa31.34■■■□□ 2.61
SSBP3-204ENST00000371320 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.34■■■□□ 2.61
SSBP3-204ENST00000371320 AP1M1Q9BXS5 423 aa31.34■■■□□ 2.61
SSBP3-204ENST00000371320 TAS2R14Q9NYV8 317 aa31.34■■■□□ 2.61
SSBP3-204ENST00000371320 GOLGA6CA6NDK9 693 aa31.34■■■□□ 2.61
SSBP3-204ENST00000371320 FAM153BP0C7A2 387 aa31.34■■■□□ 2.61
SSBP3-204ENST00000371320 GOLGA6DP0CG33 693 aa31.34■■■□□ 2.61
SSBP3-204ENST00000371320 FAM153CQ494X1 144 aa31.34■■■□□ 2.61
SSBP3-204ENST00000371320 NLRX1Q86UT6 975 aa31.34■■■□□ 2.61
SSBP3-204ENST00000371320 RASGEF1CQ8N431 466 aa31.34■■■□□ 2.61
SSBP3-204ENST00000371320 PLEKHO2Q8TD55 490 aa31.34■■■□□ 2.61
SSBP3-204ENST00000371320 SH3GL2Q99962 352 aa31.34■■■□□ 2.61
SSBP3-204ENST00000371320 GOLGA6AQ9NYA3 693 aa31.34■■■□□ 2.61
SSBP3-204ENST00000371320 FAM153AQ9UHL3 310 aa31.34■■■□□ 2.61
SSBP3-204ENST00000371320 EXOC7Q9UPT5 735 aa31.34■■■□□ 2.61
SSBP3-204ENST00000371320 IGSF9BQ9UPX0 1349 aa31.33■■■□□ 2.61
SSBP3-204ENST00000371320 CCDC169A6NNP5 214 aa31.33■■■□□ 2.61
SSBP3-204ENST00000371320 SMTNP53814 917 aa31.33■■■□□ 2.61
SSBP3-204ENST00000371320 DCAF15Q66K64 600 aa31.33■■■□□ 2.61
SSBP3-204ENST00000371320 VSIG10LQ86VR7 867 aa31.33■■■□□ 2.61
SSBP3-204ENST00000371320 RDM1Q8NG50 284 aa31.33■■■□□ 2.61
SSBP3-204ENST00000371320 MOV10L1Q9BXT6 1211 aaKnown RBP31.33■■■□□ 2.61
SSBP3-204ENST00000371320 ANKRD62A6NC57 917 aa31.33■■■□□ 2.61
SSBP3-204ENST00000371320 GOLGA8KD6RF30 607 aa31.33■■■□□ 2.61
SSBP3-204ENST00000371320 KRIT1O00522 736 aa31.33■■■□□ 2.61
SSBP3-204ENST00000371320 ZNF746Q6NUN9 644 aaPredicted RBP31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms