RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 POLR3FQ9H1D9 316 aaPredicted RBP23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 DCP1AQ9NPI6 582 aaPredicted RBP23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 PIM2Q9P1W9 311 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.61■■□□□ 1.372e-7■■■□□ 18.3
TM9SF3-201ENST00000371142 RECQLP46063 649 aaPredicted RBP23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 C1orf228Q6PIY5 440 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 MXD3Q9BW11 206 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 H0Y3Z8 333 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 GGCXP38435 758 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 NME3Q13232 169 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 GRM4Q14833 912 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 SARM1Q6SZW1 724 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 ADGRF4Q8IZF3 695 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 PRPF38AQ8NAV1 312 aaKnown RBP23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 NSUN6Q8TEA1 469 aaKnown RBP23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 STRIP2Q9ULQ0 834 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 PMS2P54278 862 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 COPS2P61201 443 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 SCHIP1Q9P0W5 487 aaPredicted RBP23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 HPCAL4Q9UM19 191 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 CAPN11Q9UMQ6 739 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 L3MBTL1Q9Y468 752 aa23.61■■□□□ 1.37
TM9SF3-201ENST00000371142 HNRNPCL2B2RXH8 293 aa23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 HNRNPCL1O60812 293 aaKnown RBP23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 ADORA2BP29275 332 aa23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 PTCH1Q13635 1447 aa23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 DRAP1Q14919 205 aaPredicted RBP23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 TRIML2Q8N7C3 387 aa23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 MDM2Q00987 491 aaPredicted RBP23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 AP1B1Q10567 949 aa23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 KRT39Q6A163 491 aa23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 CELF1Q92879 486 aaKnown RBP23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 ANKRD65E5RJM6 399 aa23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 KRT76Q01546 638 aa23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 POU5F1BQ06416 359 aa23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 KCNA1Q09470 495 aa23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 RASSF3Q86WH2 238 aa23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 ANP32DO95626 131 aa23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 PSMC1P62191 440 aaKnown RBP23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 PPP4R4Q6NUP7 873 aa23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 LRRC31Q6UY01 552 aa23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 NRBF2Q96F24 287 aa23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 POLR3CQ9BUI4 534 aaPredicted RBP23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 MAGOHP61326 146 aaKnown RBP23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 ACAD11Q709F0 780 aa23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 FBXO40Q9UH90 709 aa23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 ZFP69BQ9UJL9 534 aa23.6■■□□□ 1.37
TM9SF3-201ENST00000371142 SDC4P31431 198 aa23.59■■□□□ 1.37
TM9SF3-201ENST00000371142 PPM1NQ8N819 430 aa23.59■■□□□ 1.37
TM9SF3-201ENST00000371142 SCG3Q8WXD2 468 aaKnown RBP23.59■■□□□ 1.37
TM9SF3-201ENST00000371142 FAM20AQ96MK3 541 aa23.59■■□□□ 1.37
TM9SF3-201ENST00000371142 CPDO75976 1380 aa23.59■■□□□ 1.37
TM9SF3-201ENST00000371142 NFKBIAP25963 317 aa23.59■■□□□ 1.37
TM9SF3-201ENST00000371142 MXD4Q14582 209 aaPredicted RBP23.59■■□□□ 1.37
TM9SF3-201ENST00000371142 SUGT1Q9Y2Z0 365 aa23.59■■□□□ 1.37
TM9SF3-201ENST00000371142 MROH7-TTC4A0A0A0MT08 1334 aa23.59■■□□□ 1.37
TM9SF3-201ENST00000371142 KPNA7A9QM74 516 aa23.59■■□□□ 1.37
TM9SF3-201ENST00000371142 FTLP02792 175 aaPredicted RBP23.59■■□□□ 1.37
TM9SF3-201ENST00000371142 IMPG1Q17R60 797 aa23.59■■□□□ 1.37
TM9SF3-201ENST00000371142 SLC10A5Q5PT55 438 aa23.59■■□□□ 1.37
TM9SF3-201ENST00000371142 E2F6O75461 281 aa23.59■■□□□ 1.37
TM9SF3-201ENST00000371142 TMED1Q13445 227 aa23.59■■□□□ 1.37
TM9SF3-201ENST00000371142 CYFIP1Q7L576 1253 aa23.59■■□□□ 1.37
TM9SF3-201ENST00000371142 CCNYL1Q8N7R7 359 aa23.59■■□□□ 1.37
TM9SF3-201ENST00000371142 MARCH10Q8NA82 808 aaPredicted RBP23.59■■□□□ 1.37
TM9SF3-201ENST00000371142 ESYT3A0FGR9 886 aa23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 CYP27B1O15528 508 aa23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 KLHL38Q2WGJ6 581 aa23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 MB21D2Q8IYB1 491 aaPredicted RBP23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 PVALEFA0A1B0GWK0 134 aa23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 TMEM247A6NEH6 219 aa23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 PPP1R18Q6NYC8 613 aa23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 FMR1NBQ8N0W7 255 aaPredicted RBP23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 OSBPL9Q96SU4 736 aa23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 TMEM60Q9H2L4 133 aa23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 CYP26B1Q9NR63 512 aa23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 QARSP47897 775 aaKnown RBP23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 GPS1Q13098 491 aa23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 C2orf69Q8N8R5 385 aa23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 LXNQ9BS40 222 aa23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 TRPV6Q9H1D0 765 aa23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 FAM217BQ9NTX9 383 aaPredicted RBP23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 HDAC6Q9UBN7 1215 aa23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 P4HBP07237 508 aaKnown RBP23.58■■□□□ 1.37
TM9SF3-201ENST00000371142 GPSM2P81274 684 aa23.58■■□□□ 1.36
TM9SF3-201ENST00000371142 FSCBQ5H9T9 825 aa23.58■■□□□ 1.36
TM9SF3-201ENST00000371142 ELMOD1Q8N336 334 aa23.58■■□□□ 1.36
TM9SF3-201ENST00000371142 SPATS2LQ9NUQ6 558 aaKnown RBP23.58■■□□□ 1.36
TM9SF3-201ENST00000371142 COL15A1P39059 1388 aa23.57■■□□□ 1.36
TM9SF3-201ENST00000371142 TDP2O95551 362 aa23.57■■□□□ 1.36
TM9SF3-201ENST00000371142 MOCS2O96007 188 aaPredicted RBP23.57■■□□□ 1.36
TM9SF3-201ENST00000371142 DDX47Q9H0S4 455 aaKnown RBP23.57■■□□□ 1.36
TM9SF3-201ENST00000371142 BARHL2Q9NY43 387 aa23.57■■□□□ 1.36
TM9SF3-201ENST00000371142 DONSONQ9NYP3 566 aa23.57■■□□□ 1.36
TM9SF3-201ENST00000371142 DCTN4Q9UJW0 460 aa23.57■■□□□ 1.36
TM9SF3-201ENST00000371142 N4BP2L2Q92802 583 aaPredicted RBP23.57■■□□□ 1.36
TM9SF3-201ENST00000371142 IP6K2Q9UHH9 426 aa23.57■■□□□ 1.36
TM9SF3-201ENST00000371142 TBXAS1P24557 533 aaPredicted RBP23.57■■□□□ 1.36
TM9SF3-201ENST00000371142 QRICH1Q2TAL8 776 aa23.57■■□□□ 1.36
TM9SF3-201ENST00000371142 HEATR6Q6AI08 1181 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms