RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 FNDC1Q4ZHG4 1894 aaPredicted RBP20.5■□□□□ 0.87
CHTOP-202ENST00000368687 A0A087WWV3 80 aa20.49■□□□□ 0.87
CHTOP-202ENST00000368687 CARNS1A5YM72 827 aa20.49■□□□□ 0.87
CHTOP-202ENST00000368687 LRRIQ4A6NIV6 560 aa20.49■□□□□ 0.87
CHTOP-202ENST00000368687 INO80B-WBP1J3KQ70 363 aa20.49■□□□□ 0.87
CHTOP-202ENST00000368687 YEATS4O95619 227 aa20.49■□□□□ 0.87
CHTOP-202ENST00000368687 RB1P06400 928 aa20.49■□□□□ 0.87
CHTOP-202ENST00000368687 FGFR4P22455 802 aa20.49■□□□□ 0.87
CHTOP-202ENST00000368687 GUCY2CP25092 1073 aa20.49■□□□□ 0.87
CHTOP-202ENST00000368687 EFNA5P52803 228 aa20.49■□□□□ 0.87
CHTOP-202ENST00000368687 STK38Q15208 465 aa20.49■□□□□ 0.87
CHTOP-202ENST00000368687 CDCA2Q69YH5 1023 aaPredicted RBP20.49■□□□□ 0.87
CHTOP-202ENST00000368687 NOTUMQ6P988 496 aa20.49■□□□□ 0.87
CHTOP-202ENST00000368687 ECHDC2Q86YB7 292 aa20.49■□□□□ 0.87
CHTOP-202ENST00000368687 KRI1Q8N9T8 703 aaKnown RBP20.49■□□□□ 0.87
CHTOP-202ENST00000368687 FBXO22Q8NEZ5 403 aa20.49■□□□□ 0.87
CHTOP-202ENST00000368687 USP28Q96RU2 1077 aa20.49■□□□□ 0.87
CHTOP-202ENST00000368687 PLVAPQ9BX97 442 aa20.49■□□□□ 0.87
CHTOP-202ENST00000368687 LMCD1Q9NZU5 365 aa20.49■□□□□ 0.87
CHTOP-202ENST00000368687 CCDC39Q9UFE4 941 aa20.49■□□□□ 0.87
CHTOP-202ENST00000368687 E9PMD0 336 aa20.48■□□□□ 0.87
CHTOP-202ENST00000368687 ZNF623O75123 536 aa20.48■□□□□ 0.87
CHTOP-202ENST00000368687 CSDE1O75534 798 aaKnown RBP20.48■□□□□ 0.87
CHTOP-202ENST00000368687 POU3F3P20264 500 aaPredicted RBP20.48■□□□□ 0.87
CHTOP-202ENST00000368687 MBTD1Q05BQ5 628 aa20.48■□□□□ 0.87
CHTOP-202ENST00000368687 GRB10Q13322 594 aa20.48■□□□□ 0.87
CHTOP-202ENST00000368687 NAALADL2Q58DX5 795 aa20.48■□□□□ 0.87
CHTOP-202ENST00000368687 MAEAQ7L5Y9 396 aa20.48■□□□□ 0.87
CHTOP-202ENST00000368687 SYT2Q8N9I0 419 aaPredicted RBP20.48■□□□□ 0.87
CHTOP-202ENST00000368687 CNNM3Q8NE01 707 aa20.48■□□□□ 0.87
CHTOP-202ENST00000368687 DEPTORQ8TB45 409 aa20.48■□□□□ 0.87
CHTOP-202ENST00000368687 PGBD4Q96DM1 585 aa20.48■□□□□ 0.87
CHTOP-202ENST00000368687 C11orf84Q9BUA3 381 aaPredicted RBP20.48■□□□□ 0.87
CHTOP-202ENST00000368687 TMEM117Q9H0C3 514 aa20.48■□□□□ 0.87
CHTOP-202ENST00000368687 GPRC5CQ9NQ84 441 aa20.48■□□□□ 0.87
CHTOP-202ENST00000368687 AAASQ9NRG9 546 aa20.48■□□□□ 0.87
CHTOP-202ENST00000368687 PRMT7Q9NVM4 692 aaPredicted RBP20.48■□□□□ 0.87
CHTOP-202ENST00000368687 FBXO2Q9UK22 296 aaPredicted RBP20.48■□□□□ 0.87
CHTOP-202ENST00000368687 CFAP45Q9UL16 551 aa20.48■□□□□ 0.87
CHTOP-202ENST00000368687 VCANP13611 3396 aa20.48■□□□□ 0.87
CHTOP-202ENST00000368687 MYH11P35749 1972 aa20.48■□□□□ 0.87
CHTOP-202ENST00000368687 C5orf67F2Z3F1 127 aa20.47■□□□□ 0.87
CHTOP-202ENST00000368687 PPP6R2O75170 966 aa20.47■□□□□ 0.87
CHTOP-202ENST00000368687 MARCKSP29966 332 aaPredicted RBP20.47■□□□□ 0.87
CHTOP-202ENST00000368687 CEBPZQ03701 1054 aaKnown RBP20.47■□□□□ 0.87
CHTOP-202ENST00000368687 DMP1Q13316 513 aaPredicted RBP20.47■□□□□ 0.87
CHTOP-202ENST00000368687 MAPK6Q16659 721 aa20.47■□□□□ 0.87
CHTOP-202ENST00000368687 FAM187BQ17R55 369 aa20.47■□□□□ 0.87
CHTOP-202ENST00000368687 CSPP1Q1MSJ5 1256 aa20.47■□□□□ 0.87
CHTOP-202ENST00000368687 RINT1Q6NUQ1 792 aa20.47■□□□□ 0.87
CHTOP-202ENST00000368687 FAM173BQ6P4H8 233 aa20.47■□□□□ 0.87
CHTOP-202ENST00000368687 PPP4R3CPQ6ZMV5 832 aa20.47■□□□□ 0.87
CHTOP-202ENST00000368687 C1orf186Q6ZWK4 172 aa20.47■□□□□ 0.87
CHTOP-202ENST00000368687 SPRED2Q7Z698 418 aa20.47■□□□□ 0.87
CHTOP-202ENST00000368687 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.47■□□□□ 0.87
CHTOP-202ENST00000368687 TMEM192Q8IY95 271 aa20.47■□□□□ 0.87
CHTOP-202ENST00000368687 HACE1Q8IYU2 909 aa20.47■□□□□ 0.87
CHTOP-202ENST00000368687 PNMA5Q96PV4 448 aa20.47■□□□□ 0.87
CHTOP-202ENST00000368687 MRPL9Q9BYD2 267 aaKnown RBP20.47■□□□□ 0.87
CHTOP-202ENST00000368687 CSRNP2Q9H175 543 aa20.47■□□□□ 0.87
CHTOP-202ENST00000368687 MINDY3Q9H8M7 445 aa20.47■□□□□ 0.87
CHTOP-202ENST00000368687 FAM105AQ9NUU6 356 aa20.47■□□□□ 0.87
CHTOP-202ENST00000368687 ATP6V1DQ9Y5K8 247 aa20.47■□□□□ 0.87
CHTOP-202ENST00000368687 COL4A4P53420 1690 aaPredicted RBP20.47■□□□□ 0.87
CHTOP-202ENST00000368687 EPOPA6NHQ4 379 aa20.46■□□□□ 0.87
CHTOP-202ENST00000368687 PLA2G4BP0C869 781 aa20.46■□□□□ 0.87
CHTOP-202ENST00000368687 SCP2P22307 547 aa20.46■□□□□ 0.87
CHTOP-202ENST00000368687 PTPROQ16827 1216 aa20.46■□□□□ 0.87
CHTOP-202ENST00000368687 EPC2Q52LR7 807 aa20.46■□□□□ 0.87
CHTOP-202ENST00000368687 ZNF598Q86UK7 904 aaKnown RBP20.46■□□□□ 0.87
CHTOP-202ENST00000368687 LRRC43Q8N309 656 aa20.46■□□□□ 0.87
CHTOP-202ENST00000368687 SPRYD3Q8NCJ5 442 aa20.46■□□□□ 0.87
CHTOP-202ENST00000368687 LINC00301Q8NCQ3 95 aa20.46■□□□□ 0.87
CHTOP-202ENST00000368687 KCNG4Q8TDN1 519 aa20.46■□□□□ 0.87
CHTOP-202ENST00000368687 CERS4Q9HA82 394 aa20.46■□□□□ 0.87
CHTOP-202ENST00000368687 STK17AQ9UEE5 414 aa20.46■□□□□ 0.87
CHTOP-202ENST00000368687 TBKBP1A7MCY6 615 aa20.45■□□□□ 0.86
CHTOP-202ENST00000368687 SPTLC2O15270 562 aa20.45■□□□□ 0.86
CHTOP-202ENST00000368687 TSPAN1O60635 241 aa20.45■□□□□ 0.86
CHTOP-202ENST00000368687 SSBP05455 408 aaKnown RBP eCLIP20.45■□□□□ 0.86
CHTOP-202ENST00000368687 IGFBP4P22692 258 aa20.45■□□□□ 0.86
CHTOP-202ENST00000368687 HOXA11P31270 313 aaPredicted RBP20.45■□□□□ 0.86
CHTOP-202ENST00000368687 CTNNB1P35222 781 aa20.45■□□□□ 0.86
CHTOP-202ENST00000368687 BMPR1AP36894 532 aa20.45■□□□□ 0.86
CHTOP-202ENST00000368687 SLC12A3P55017 1021 aa20.45■□□□□ 0.86
CHTOP-202ENST00000368687 KCNK18Q7Z418 384 aa20.45■□□□□ 0.86
CHTOP-202ENST00000368687 P2RX5Q93086 422 aa20.45■□□□□ 0.86
CHTOP-202ENST00000368687 C17orf80Q9BSJ5 609 aa20.45■□□□□ 0.86
CHTOP-202ENST00000368687 UBN1Q9NPG3 1134 aa20.45■□□□□ 0.86
CHTOP-202ENST00000368687 MTUS1Q9ULD2 1270 aa20.45■□□□□ 0.86
CHTOP-202ENST00000368687 ODF2LQ9ULJ1 636 aa20.45■□□□□ 0.86
CHTOP-202ENST00000368687 RBM19Q9Y4C8 960 aaKnown RBP20.45■□□□□ 0.86
CHTOP-202ENST00000368687 CNTNAP2Q9UHC6 1331 aa20.45■□□□□ 0.86
CHTOP-202ENST00000368687 REV3LO60673 3130 aa20.44■□□□□ 0.86
CHTOP-202ENST00000368687 H0YCG3 227 aa20.44■□□□□ 0.86
CHTOP-202ENST00000368687 H3BNC9 293 aa20.44■□□□□ 0.86
CHTOP-202ENST00000368687 RFXAPO00287 272 aa20.44■□□□□ 0.86
CHTOP-202ENST00000368687 HIP1RO75146 1068 aa20.44■□□□□ 0.86
CHTOP-202ENST00000368687 PLCG1P19174 1290 aa20.44■□□□□ 0.86
CHTOP-202ENST00000368687 IBSPP21815 317 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms