RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 LRP2BPQ9P2M1 347 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 COPB2P35606 906 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 KPNB1Q14974 876 aaKnown RBP19.28■□□□□ 0.68
CHTOP-201ENST00000368686 GSTA3Q16772 222 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 SNX30Q5VWJ9 437 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 DNAAF5Q86Y56 855 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 TLE6Q9H808 572 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 NKIRAS1Q9NYS0 192 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 LARSQ9P2J5 1176 aaKnown RBP19.28■□□□□ 0.68
CHTOP-201ENST00000368686 PCYOX1Q9UHG3 505 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 STARD13Q9Y3M8 1113 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 PCDHGA4Q9Y5G9 962 aa19.28■□□□□ 0.68
CHTOP-201ENST00000368686 FAM163BP0C2L3 166 aa19.27■□□□□ 0.68
CHTOP-201ENST00000368686 BRAFP15056 766 aa19.27■□□□□ 0.68
CHTOP-201ENST00000368686 CREB1P16220 341 aa19.27■□□□□ 0.68
CHTOP-201ENST00000368686 MARK3P27448 753 aa19.27■□□□□ 0.68
CHTOP-201ENST00000368686 PPP1R21Q6ZMI0 780 aa19.27■□□□□ 0.68
CHTOP-201ENST00000368686 ADAT2Q7Z6V5 191 aaKnown RBP19.27■□□□□ 0.68
CHTOP-201ENST00000368686 ZC3H18Q86VM9 953 aaKnown RBP19.27■□□□□ 0.68
CHTOP-201ENST00000368686 CDK5RAP3Q96JB5 506 aa19.27■□□□□ 0.68
CHTOP-201ENST00000368686 CHKBQ9Y259 395 aa19.27■□□□□ 0.68
CHTOP-201ENST00000368686 NCANO14594 1321 aa19.27■□□□□ 0.68
CHTOP-201ENST00000368686 CCNT1O60563 726 aaKnown RBP19.27■□□□□ 0.68
CHTOP-201ENST00000368686 GH1P01241 217 aa19.27■□□□□ 0.68
CHTOP-201ENST00000368686 UCHL3P15374 230 aa19.27■□□□□ 0.68
CHTOP-201ENST00000368686 ACBD5Q5T8D3 534 aaPredicted RBP19.27■□□□□ 0.68
CHTOP-201ENST00000368686 SCG3Q8WXD2 468 aaKnown RBP19.27■□□□□ 0.68
CHTOP-201ENST00000368686 BRIP1Q9BX63 1249 aa19.27■□□□□ 0.68
CHTOP-201ENST00000368686 TULP1O00294 542 aaPredicted RBP19.26■□□□□ 0.67
CHTOP-201ENST00000368686 CETN3O15182 167 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 HNRNPCL1O60812 293 aaKnown RBP19.26■□□□□ 0.67
CHTOP-201ENST00000368686 TTLL1O95922 423 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 TAC1P20366 129 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 TPP2P29144 1249 aaPredicted RBP19.26■□□□□ 0.67
CHTOP-201ENST00000368686 MTA1Q13330 715 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 GLIS3Q8NEA6 775 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 ART4Q93070 314 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 C18orf8Q96DM3 657 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 MMADHCQ9H3L0 296 aaPredicted RBP19.26■□□□□ 0.67
CHTOP-201ENST00000368686 BAZ2AQ9UIF9 1905 aaKnown RBP19.26■□□□□ 0.67
CHTOP-201ENST00000368686 LETM2Q2VYF4 491 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 ZNF568Q3ZCX4 644 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 CYFIP1Q7L576 1253 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 KRT25Q7Z3Z0 450 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 SYCP3Q8IZU3 236 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 PPFIBP2Q8ND30 876 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 RFFLQ8WZ73 363 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 DDX12PQ92771 950 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 BLOC1S6Q9UL45 172 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 PPP1R9AQ9ULJ8 1098 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 PCDHA3Q9Y5H8 950 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.26■□□□□ 0.67
CHTOP-201ENST00000368686 LRP5O75197 1615 aa19.26■□□□□ 0.67
CHTOP-201ENST00000368686 SYNGAP1Q96PV0 1343 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 CYP2D7A0A087X1C5 515 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 GFPT2O94808 682 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 PTPN4P29074 926 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 SESN3P58005 492 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 KCNH2Q12809 1159 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 ORC2Q13416 577 aaPredicted RBP19.25■□□□□ 0.67
CHTOP-201ENST00000368686 MPP2Q14168 576 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 RRP1BQ14684 758 aaKnown RBP19.25■□□□□ 0.67
CHTOP-201ENST00000368686 CNPY1Q3B7I2 92 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 C1QTNF12Q5T7M4 302 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 RASIP1Q5U651 963 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 CCNJLQ8IV13 435 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 RAD54LQ92698 747 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 PNMA5Q96PV4 448 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 NR1H4Q96RI1 486 aaPredicted RBP19.25■□□□□ 0.67
CHTOP-201ENST00000368686 CRAMP1Q96RY5 1269 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 NT5C3AQ9H0P0 336 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 METTL14Q9HCE5 456 aaKnown RBP19.25■□□□□ 0.67
CHTOP-201ENST00000368686 CCDC87Q9NVE4 849 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.25■□□□□ 0.67
CHTOP-201ENST00000368686 RTCBQ9Y3I0 505 aaKnown RBP19.25■□□□□ 0.67
CHTOP-201ENST00000368686 GMEB1Q9Y692 573 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 NMT2O60551 498 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 T-ENOLP0DO92 83 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 GALCP54803 685 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 IL9RQ01113 521 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 PPATQ06203 517 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 MCL1Q07820 350 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 SFSWAPQ12872 951 aaKnown RBP19.25■□□□□ 0.67
CHTOP-201ENST00000368686 GIT2Q14161 759 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 C4orf50Q6ZRC1 276 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 HELBQ8NG08 1087 aaPredicted RBP19.25■□□□□ 0.67
CHTOP-201ENST00000368686 SPZ1Q9BXG8 430 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 OCEL1Q9H607 264 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 GALNT8Q9NY28 637 aa19.25■□□□□ 0.67
CHTOP-201ENST00000368686 ADGRA3Q8IWK6 1321 aa19.24■□□□□ 0.67
CHTOP-201ENST00000368686 ACTN1P12814 892 aa19.24■□□□□ 0.67
CHTOP-201ENST00000368686 VCAM1P19320 739 aa19.24■□□□□ 0.67
CHTOP-201ENST00000368686 NONOQ15233 471 aaKnown RBP eCLIP19.24■□□□□ 0.67
CHTOP-201ENST00000368686 DPY19L2P1Q6NXN4 242 aa19.24■□□□□ 0.67
CHTOP-201ENST00000368686 KIF6Q6ZMV9 814 aa19.24■□□□□ 0.67
CHTOP-201ENST00000368686 LRRC74BQ6ZQY2 392 aa19.24■□□□□ 0.67
CHTOP-201ENST00000368686 ADGRA1Q86SQ6 560 aa19.24■□□□□ 0.67
CHTOP-201ENST00000368686 SYNE4Q8N205 404 aa19.24■□□□□ 0.67
CHTOP-201ENST00000368686 U2AF1L4Q8WU68 220 aaKnown RBP19.24■□□□□ 0.67
CHTOP-201ENST00000368686 SPATA16Q9BXB7 569 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms