RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 NBPF20Q3BBV1 942 aa13.53□□□□□ -0.24
TUBE1-202ENST00000368662 CDCA2Q69YH5 1023 aaPredicted RBP13.53□□□□□ -0.24
TUBE1-202ENST00000368662 ZBTB8OSQ8IWT0 167 aa13.53□□□□□ -0.24
TUBE1-202ENST00000368662 ANKRD20A12PQ8NF67 263 aa13.53□□□□□ -0.24
TUBE1-202ENST00000368662 GLT1D1Q96MS3 346 aa13.53□□□□□ -0.24
TUBE1-202ENST00000368662 TMEM134Q9H6X4 195 aa13.53□□□□□ -0.24
TUBE1-202ENST00000368662 GTF2IRD1Q9UHL9 959 aa13.53□□□□□ -0.24
TUBE1-202ENST00000368662 KBTBD13C9JR72 458 aa13.52□□□□□ -0.24
TUBE1-202ENST00000368662 K7ERI5 159 aa13.52□□□□□ -0.24
TUBE1-202ENST00000368662 CCL5P13501 91 aa13.52□□□□□ -0.24
TUBE1-202ENST00000368662 PTPN11Q06124 597 aaPredicted RBP13.52□□□□□ -0.24
TUBE1-202ENST00000368662 KCNA1Q09470 495 aa13.52□□□□□ -0.24
TUBE1-202ENST00000368662 CDKAL1Q5VV42 579 aa13.52□□□□□ -0.24
TUBE1-202ENST00000368662 TAF2Q6P1X5 1199 aa13.52□□□□□ -0.24
TUBE1-202ENST00000368662 SARM1Q6SZW1 724 aa13.52□□□□□ -0.24
TUBE1-202ENST00000368662 RNF149Q8NC42 400 aa13.52□□□□□ -0.24
TUBE1-202ENST00000368662 CEP63Q96MT8 703 aa13.52□□□□□ -0.24
TUBE1-202ENST00000368662 DUSP9Q99956 384 aaKnown RBP13.52□□□□□ -0.24
TUBE1-202ENST00000368662 KIFC3Q9BVG8 833 aa13.52□□□□□ -0.24
TUBE1-202ENST00000368662 SRRTQ9BXP5 876 aaKnown RBP13.52□□□□□ -0.24
TUBE1-202ENST00000368662 SEZ6LQ9BYH1 1024 aa13.52□□□□□ -0.24
TUBE1-202ENST00000368662 RNF208Q9H0X6 261 aa13.52□□□□□ -0.24
TUBE1-202ENST00000368662 HSD3B7Q9H2F3 369 aa13.52□□□□□ -0.24
TUBE1-202ENST00000368662 SAMSN1Q9NSI8 373 aaKnown RBP13.52□□□□□ -0.24
TUBE1-202ENST00000368662 ADGRA3Q8IWK6 1321 aa13.52□□□□□ -0.24
TUBE1-202ENST00000368662 ZMYM2Q9UBW7 1377 aa13.52□□□□□ -0.25
TUBE1-202ENST00000368662 CYP2C9P11712 490 aa13.52□□□□□ -0.25
TUBE1-202ENST00000368662 PLCB2Q00722 1185 aa13.52□□□□□ -0.25
TUBE1-202ENST00000368662 MYBPC2Q14324 1141 aa13.52□□□□□ -0.25
TUBE1-202ENST00000368662 ZNF410Q86VK4 478 aa13.52□□□□□ -0.25
TUBE1-202ENST00000368662 KIAA0319LQ8IZA0 1049 aa13.52□□□□□ -0.25
TUBE1-202ENST00000368662 NME8Q8N427 588 aa13.52□□□□□ -0.25
TUBE1-202ENST00000368662 TMEM174Q8WUU8 243 aa13.52□□□□□ -0.25
TUBE1-202ENST00000368662 CTAGE1Q96RT6 745 aa13.52□□□□□ -0.25
TUBE1-202ENST00000368662 MAGEC2Q9UBF1 373 aaPredicted RBP13.52□□□□□ -0.25
TUBE1-202ENST00000368662 DNM1LO00429 736 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 CETN3O15182 167 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 GNA14O95837 355 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 SRGAP2CP0DJJ0 459 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 EEF1GP26641 437 aaKnown RBP13.51□□□□□ -0.25
TUBE1-202ENST00000368662 PHKA2P46019 1235 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 ZC3H3Q8IXZ2 948 aaKnown RBP13.51□□□□□ -0.25
TUBE1-202ENST00000368662 VTI1AQ96AJ9 217 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 NLRP4Q96MN2 994 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 TREHO43280 583 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 TGFB1I1O43294 461 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 NR2F2P24468 414 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 PTENP60484 403 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 ADAM9Q13443 819 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 MTFR1Q15390 333 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 FAM47CQ5HY64 1035 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 IFNLR1Q8IU57 520 aaPredicted RBP13.51□□□□□ -0.25
TUBE1-202ENST00000368662 KSR1Q8IVT5 923 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 ZBTB10Q96DT7 871 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 ZNF333Q96JL9 665 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 DEFB118Q96PH6 123 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 AGPAT3Q9NRZ7 376 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 OGDHLQ9ULD0 1010 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 PHF24Q9UPV7 400 aa13.51□□□□□ -0.25
TUBE1-202ENST00000368662 EVPLQ92817 2033 aa13.5□□□□□ -0.25
TUBE1-202ENST00000368662 HNRNPDLO14979 420 aaKnown RBP13.5□□□□□ -0.25
TUBE1-202ENST00000368662 SERPINC1P01008 464 aa13.5□□□□□ -0.25
TUBE1-202ENST00000368662 NR3C1P04150 777 aa13.5□□□□□ -0.25
TUBE1-202ENST00000368662 TPM3P06753 285 aa13.5□□□□□ -0.25
TUBE1-202ENST00000368662 ITGA7Q13683 1181 aa13.5□□□□□ -0.25
TUBE1-202ENST00000368662 MAPK6Q16659 721 aa13.5□□□□□ -0.25
TUBE1-202ENST00000368662 LRRC55Q6ZSA7 311 aa13.5□□□□□ -0.25
TUBE1-202ENST00000368662 FILIP1Q7Z7B0 1213 aa13.5□□□□□ -0.25
TUBE1-202ENST00000368662 RSPH3Q86UC2 560 aa13.5□□□□□ -0.25
TUBE1-202ENST00000368662 SLC9A9Q8IVB4 645 aa13.5□□□□□ -0.25
TUBE1-202ENST00000368662 C12orf56Q8IXR9 622 aa13.5□□□□□ -0.25
TUBE1-202ENST00000368662 NLRP7Q8WX94 980 aa13.5□□□□□ -0.25
TUBE1-202ENST00000368662 ARMC5Q96C12 935 aa13.5□□□□□ -0.25
TUBE1-202ENST00000368662 BICD1Q96G01 975 aa13.5□□□□□ -0.25
TUBE1-202ENST00000368662 STARD7Q9NQZ5 370 aa13.5□□□□□ -0.25
TUBE1-202ENST00000368662 FRMPD3Q5JV73 1810 aa13.5□□□□□ -0.25
TUBE1-202ENST00000368662 BRCA2P51587 3418 aa13.5□□□□□ -0.25
TUBE1-202ENST00000368662 A0A1W2PQ45 241 aaPredicted RBP13.49□□□□□ -0.25
TUBE1-202ENST00000368662 A0A1W2PQY0 241 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 KCNJ18B7U540 433 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 CBFA2T2O43439 604 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 PIGRP01833 764 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 VTNP04004 478 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 ATP1A3P13637 1013 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 GPC3P51654 580 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 KCNJ12Q14500 433 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 HSP90AA2PQ14568 343 aaPredicted RBP13.49□□□□□ -0.25
TUBE1-202ENST00000368662 PCBP1Q15365 356 aaKnown RBP eCLIP13.49□□□□□ -0.25
TUBE1-202ENST00000368662 TCP11X2Q5H9J9 407 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 TAS1R3Q7RTX0 852 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 SCLT1Q96NL6 688 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 TRIM5Q9C035 493 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 PRMT7Q9NVM4 692 aaPredicted RBP13.49□□□□□ -0.25
TUBE1-202ENST00000368662 A0A0U1RQG5 324 aaPredicted RBP13.49□□□□□ -0.25
TUBE1-202ENST00000368662 SLC16A3O15427 465 aaKnown RBP13.49□□□□□ -0.25
TUBE1-202ENST00000368662 TPM2P07951 284 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 GJB1P08034 283 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 CAPN2P17655 700 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 LIG4P49917 911 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 NLRP11P59045 1033 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms