RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 AMHR2Q16671 573 aa24.86■■□□□ 1.57
ECHDC1-203ENST00000368291 FOXD4L6Q3SYB3 417 aaPredicted RBP24.86■■□□□ 1.57
ECHDC1-203ENST00000368291 FOXD4L3Q6VB84 417 aaPredicted RBP24.86■■□□□ 1.57
ECHDC1-203ENST00000368291 CDK5RAP3Q96JB5 506 aa24.86■■□□□ 1.57
ECHDC1-203ENST00000368291 TGS1Q96RS0 853 aaKnown RBP24.86■■□□□ 1.57
ECHDC1-203ENST00000368291 C17orf80Q9BSJ5 609 aa24.86■■□□□ 1.57
ECHDC1-203ENST00000368291 BLOC1S4Q9NUP1 217 aa24.86■■□□□ 1.57
ECHDC1-203ENST00000368291 RNF19AQ9NV58 838 aa24.86■■□□□ 1.57
ECHDC1-203ENST00000368291 TMEM161AQ9NX61 479 aa24.86■■□□□ 1.57
ECHDC1-203ENST00000368291 LRFN2Q9ULH4 789 aa24.86■■□□□ 1.57
ECHDC1-203ENST00000368291 TRANK1O15050 2925 aa24.85■■□□□ 1.57
ECHDC1-203ENST00000368291 RFXAPO00287 272 aa24.85■■□□□ 1.57
ECHDC1-203ENST00000368291 ATF7P17544 494 aaPredicted RBP24.85■■□□□ 1.57
ECHDC1-203ENST00000368291 PLCG1P19174 1290 aa24.85■■□□□ 1.57
ECHDC1-203ENST00000368291 MAPK7Q13164 816 aa24.85■■□□□ 1.57
ECHDC1-203ENST00000368291 BECN1Q14457 450 aa24.85■■□□□ 1.57
ECHDC1-203ENST00000368291 CDCA2Q69YH5 1023 aaPredicted RBP24.85■■□□□ 1.57
ECHDC1-203ENST00000368291 ZNF598Q86UK7 904 aaKnown RBP24.85■■□□□ 1.57
ECHDC1-203ENST00000368291 ARNTL2Q8WYA1 636 aa24.85■■□□□ 1.57
ECHDC1-203ENST00000368291 CALML4Q96GE6 196 aa24.85■■□□□ 1.57
ECHDC1-203ENST00000368291 DACT1Q9NYF0 836 aa24.85■■□□□ 1.57
ECHDC1-203ENST00000368291 LRRIQ4A6NIV6 560 aa24.84■■□□□ 1.57
ECHDC1-203ENST00000368291 INO80B-WBP1J3KQ70 363 aa24.84■■□□□ 1.57
ECHDC1-203ENST00000368291 TSPAN1O60635 241 aa24.84■■□□□ 1.57
ECHDC1-203ENST00000368291 PLA2G4BP0C869 781 aa24.84■■□□□ 1.57
ECHDC1-203ENST00000368291 STK38Q15208 465 aa24.84■■□□□ 1.57
ECHDC1-203ENST00000368291 KRI1Q8N9T8 703 aaKnown RBP24.84■■□□□ 1.57
ECHDC1-203ENST00000368291 SYMPKQ92797 1274 aaKnown RBP24.84■■□□□ 1.57
ECHDC1-203ENST00000368291 MTUS1Q9ULD2 1270 aa24.84■■□□□ 1.57
ECHDC1-203ENST00000368291 EYSQ5T1H1 3165 aa24.84■■□□□ 1.57
ECHDC1-203ENST00000368291 ATG2AQ2TAZ0 1938 aa24.84■■□□□ 1.57
ECHDC1-203ENST00000368291 HIP1RO75146 1068 aa24.83■■□□□ 1.57
ECHDC1-203ENST00000368291 YEATS4O95619 227 aa24.83■■□□□ 1.57
ECHDC1-203ENST00000368291 FGFR1P11362 822 aa24.83■■□□□ 1.57
ECHDC1-203ENST00000368291 GUCY2CP25092 1073 aa24.83■■□□□ 1.57
ECHDC1-203ENST00000368291 NAMPTP43490 491 aa24.83■■□□□ 1.57
ECHDC1-203ENST00000368291 BTG3Q14201 252 aaPredicted RBP24.83■■□□□ 1.57
ECHDC1-203ENST00000368291 PCBP1Q15365 356 aaKnown RBP eCLIP24.83■■□□□ 1.57
ECHDC1-203ENST00000368291 TWF2Q6IBS0 349 aaKnown RBP24.83■■□□□ 1.57
ECHDC1-203ENST00000368291 CMTR2Q8IYT2 770 aaKnown RBP24.83■■□□□ 1.57
ECHDC1-203ENST00000368291 FIBCD1Q8N539 461 aa24.83■■□□□ 1.57
ECHDC1-203ENST00000368291 KIFAP3Q92845 792 aa24.83■■□□□ 1.57
ECHDC1-203ENST00000368291 SPTLC2O15270 562 aa24.82■■□□□ 1.56
ECHDC1-203ENST00000368291 LPXNO60711 386 aa24.82■■□□□ 1.56
ECHDC1-203ENST00000368291 PPP6R2O75170 966 aa24.82■■□□□ 1.56
ECHDC1-203ENST00000368291 PAN2Q504Q3 1202 aaKnown RBP24.82■■□□□ 1.56
ECHDC1-203ENST00000368291 ARSHQ5FYA8 562 aa24.82■■□□□ 1.56
ECHDC1-203ENST00000368291 UBXN11Q5T124 520 aa24.82■■□□□ 1.56
ECHDC1-203ENST00000368291 CLP1Q92989 425 aaKnown RBP24.82■■□□□ 1.56
ECHDC1-203ENST00000368291 FAM105AQ9NUU6 356 aa24.82■■□□□ 1.56
ECHDC1-203ENST00000368291 RNF216Q9NWF9 866 aaPredicted RBP24.82■■□□□ 1.56
ECHDC1-203ENST00000368291 DAXXQ9UER7 740 aaPredicted RBP24.82■■□□□ 1.56
ECHDC1-203ENST00000368291 PRRC2BQ5JSZ5 2229 aaKnown RBP24.82■■□□□ 1.56
ECHDC1-203ENST00000368291 ERLIN2O94905 339 aa24.81■■□□□ 1.56
ECHDC1-203ENST00000368291 EOMESO95936 686 aa24.81■■□□□ 1.56
ECHDC1-203ENST00000368291 SSBP05455 408 aaKnown RBP eCLIP24.81■■□□□ 1.56
ECHDC1-203ENST00000368291 FOSL2P15408 326 aa24.81■■□□□ 1.56
ECHDC1-203ENST00000368291 DNM1Q05193 864 aaKnown RBP24.81■■□□□ 1.56
ECHDC1-203ENST00000368291 EPC2Q52LR7 807 aa24.81■■□□□ 1.56
ECHDC1-203ENST00000368291 RAD54LQ92698 747 aa24.81■■□□□ 1.56
ECHDC1-203ENST00000368291 CPB2Q96IY4 423 aa24.81■■□□□ 1.56
ECHDC1-203ENST00000368291 GAS2L1Q99501 681 aaPredicted RBP24.81■■□□□ 1.56
ECHDC1-203ENST00000368291 KIFC3Q9BVG8 833 aa24.81■■□□□ 1.56
ECHDC1-203ENST00000368291 CCDC113Q9H0I3 377 aa24.81■■□□□ 1.56
ECHDC1-203ENST00000368291 FZD8Q9H461 694 aa24.81■■□□□ 1.56
ECHDC1-203ENST00000368291 MRPL42Q9Y6G3 142 aaKnown RBP24.81■■□□□ 1.56
ECHDC1-203ENST00000368291 B4GALT5O43286 388 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 ZNF623O75123 536 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 ARF4P18085 180 aaPredicted RBP24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 AXLP30530 894 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 MCM6Q14566 821 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 PPP2R5AQ15172 486 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 CLLU1OSQ5K130 101 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 TMEM192Q8IY95 271 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 SAMD11Q96NU1 681 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 CASD1Q96PB1 797 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 A0A087X0B3 334 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 NPHP3-ACAD11A0A0J9YXS1 232 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 TTLL13PA6NNM8 815 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 TBKBP1A7MCY6 615 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 MEIS3P2A8K0S8 358 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 SFI1A8K8P3 1242 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 EDN1P05305 212 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 RAD51AP2Q09MP3 1159 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 FAM187BQ17R55 369 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 NAALADL2Q58DX5 795 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 ATL3Q6DD88 541 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 PPP4R3CPQ6ZMV5 832 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 GDPD5Q8WTR4 605 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 CHAMP1Q96JM3 812 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 IFT74Q96LB3 600 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 TIPINQ9BVW5 301 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 KCND2Q9NZV8 630 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 HCSTQ9UBK5 93 aa24.8■■□□□ 1.56
ECHDC1-203ENST00000368291 PLXNA4Q9HCM2 1894 aa24.79■■□□□ 1.56
ECHDC1-203ENST00000368291 DDIT3P35638 169 aa24.79■■□□□ 1.56
ECHDC1-203ENST00000368291 PEX3P56589 373 aa24.79■■□□□ 1.56
ECHDC1-203ENST00000368291 ZBTB8OSQ8IWT0 167 aa24.79■■□□□ 1.56
ECHDC1-203ENST00000368291 RNF169Q8NCN4 708 aa24.79■■□□□ 1.56
ECHDC1-203ENST00000368291 FBXO22Q8NEZ5 403 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms