RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 MARCKSP29966 332 aaPredicted RBP16.29■□□□□ 0.2
SF3B5-201ENST00000367569 SPECC1Q5M775 1068 aa16.29■□□□□ 0.2
SF3B5-201ENST00000367569 FAM102BQ5T8I3 360 aa16.29■□□□□ 0.2
SF3B5-201ENST00000367569 KRT79Q5XKE5 535 aa16.29■□□□□ 0.2
SF3B5-201ENST00000367569 PADI6Q6TGC4 694 aa16.29■□□□□ 0.2
SF3B5-201ENST00000367569 EP400NLQ6ZTU2 488 aa16.29■□□□□ 0.2
SF3B5-201ENST00000367569 NPAS4Q8IUM7 802 aa16.29■□□□□ 0.2
SF3B5-201ENST00000367569 GJD3Q8N144 294 aa16.29■□□□□ 0.2
SF3B5-201ENST00000367569 RNF149Q8NC42 400 aa16.29■□□□□ 0.2
SF3B5-201ENST00000367569 BSNDQ8WZ55 320 aa16.29■□□□□ 0.2
SF3B5-201ENST00000367569 PNMA5Q96PV4 448 aa16.29■□□□□ 0.2
SF3B5-201ENST00000367569 JPH2Q9BR39 696 aaPredicted RBP16.29■□□□□ 0.2
SF3B5-201ENST00000367569 GCOM2Q9BZD3 368 aaPredicted RBP16.29■□□□□ 0.2
SF3B5-201ENST00000367569 RAB34Q9BZG1 259 aa16.29■□□□□ 0.2
SF3B5-201ENST00000367569 LMAN2LQ9H0V9 348 aa16.29■□□□□ 0.2
SF3B5-201ENST00000367569 IFT122Q9HBG6 1241 aa16.29■□□□□ 0.2
SF3B5-201ENST00000367569 ALG13Q9NP73 1137 aaKnown RBP16.29■□□□□ 0.2
SF3B5-201ENST00000367569 C11orf16Q9NQ32 467 aa16.29■□□□□ 0.2
SF3B5-201ENST00000367569 PIN4Q9Y237 131 aaKnown RBP16.29■□□□□ 0.2
SF3B5-201ENST00000367569 MRPL42Q9Y6G3 142 aaKnown RBP16.29■□□□□ 0.2
SF3B5-201ENST00000367569 DGAT1O75907 488 aa16.28■□□□□ 0.2
SF3B5-201ENST00000367569 SSBP05455 408 aaKnown RBP eCLIP16.28■□□□□ 0.2
SF3B5-201ENST00000367569 FGFR1P11362 822 aa16.28■□□□□ 0.2
SF3B5-201ENST00000367569 GLRA2P23416 452 aa16.28■□□□□ 0.2
SF3B5-201ENST00000367569 LTBRP36941 435 aa16.28■□□□□ 0.2
SF3B5-201ENST00000367569 CAMK1Q14012 370 aa16.28■□□□□ 0.2
SF3B5-201ENST00000367569 DSC3Q14574 896 aa16.28■□□□□ 0.2
SF3B5-201ENST00000367569 CATSPER4Q7RTX7 472 aa16.28■□□□□ 0.2
SF3B5-201ENST00000367569 ZNF410Q86VK4 478 aa16.28■□□□□ 0.2
SF3B5-201ENST00000367569 TCP11Q8WWU5 503 aa16.28■□□□□ 0.2
SF3B5-201ENST00000367569 NACC1Q96RE7 527 aa16.28■□□□□ 0.2
SF3B5-201ENST00000367569 USP28Q96RU2 1077 aa16.28■□□□□ 0.2
SF3B5-201ENST00000367569 CLDND1Q9NY35 253 aa16.28■□□□□ 0.2
SF3B5-201ENST00000367569 LRFN2Q9ULH4 789 aa16.28■□□□□ 0.2
SF3B5-201ENST00000367569 LRRIQ4A6NIV6 560 aa16.27■□□□□ 0.2
SF3B5-201ENST00000367569 PI4K2BG5E9Z4 385 aa16.27■□□□□ 0.2
SF3B5-201ENST00000367569 LIG1P18858 919 aa16.27■□□□□ 0.2
SF3B5-201ENST00000367569 SFPQP23246 707 aaKnown RBP eCLIP16.27■□□□□ 0.2
SF3B5-201ENST00000367569 RAD51AP2Q09MP3 1159 aa16.27■□□□□ 0.2
SF3B5-201ENST00000367569 HYAL1Q12794 435 aa16.27■□□□□ 0.2
SF3B5-201ENST00000367569 PTPAQ15257 358 aa16.27■□□□□ 0.2
SF3B5-201ENST00000367569 PUS10Q3MIT2 529 aaKnown RBP16.27■□□□□ 0.2
SF3B5-201ENST00000367569 CABP7Q86V35 215 aa16.27■□□□□ 0.2
SF3B5-201ENST00000367569 CMTR2Q8IYT2 770 aaKnown RBP16.27■□□□□ 0.2
SF3B5-201ENST00000367569 LRRC15Q8TF66 581 aa16.27■□□□□ 0.2
SF3B5-201ENST00000367569 CHAMP1Q96JM3 812 aa16.27■□□□□ 0.2
SF3B5-201ENST00000367569 CLIC6Q96NY7 704 aa16.27■□□□□ 0.2
SF3B5-201ENST00000367569 KIFC3Q9BVG8 833 aa16.27■□□□□ 0.2
SF3B5-201ENST00000367569 RUSC1Q9BVN2 902 aa16.27■□□□□ 0.2
SF3B5-201ENST00000367569 PLVAPQ9BX97 442 aa16.27■□□□□ 0.2
SF3B5-201ENST00000367569 RGS18Q9NS28 235 aa16.27■□□□□ 0.2
SF3B5-201ENST00000367569 DAXXQ9UER7 740 aaPredicted RBP16.27■□□□□ 0.2
SF3B5-201ENST00000367569 DBR1Q9UK59 544 aaKnown RBP16.27■□□□□ 0.2
SF3B5-201ENST00000367569 PLAGL2Q9UPG8 496 aa16.27■□□□□ 0.2
SF3B5-201ENST00000367569 PPME1Q9Y570 386 aa16.27■□□□□ 0.2
SF3B5-201ENST00000367569 FAM86C2PA6NEL3 165 aa16.26■□□□□ 0.19
SF3B5-201ENST00000367569 C9IYK1 514 aa16.26■□□□□ 0.19
SF3B5-201ENST00000367569 STAG3L1P0CL83 205 aa16.26■□□□□ 0.19
SF3B5-201ENST00000367569 DNAJB1P25685 340 aa16.26■□□□□ 0.19
SF3B5-201ENST00000367569 SSTR3P32745 418 aaPredicted RBP16.26■□□□□ 0.19
SF3B5-201ENST00000367569 GTF2F1P35269 517 aaKnown RBP eCLIP16.26■□□□□ 0.19
SF3B5-201ENST00000367569 PHKA2P46019 1235 aa16.26■□□□□ 0.19
SF3B5-201ENST00000367569 SARSP49591 514 aaKnown RBP16.26■□□□□ 0.19
SF3B5-201ENST00000367569 CACNB1Q02641 598 aaPredicted RBP16.26■□□□□ 0.19
SF3B5-201ENST00000367569 DLX2Q07687 328 aaPredicted RBP16.26■□□□□ 0.19
SF3B5-201ENST00000367569 PDIA5Q14554 519 aa16.26■□□□□ 0.19
SF3B5-201ENST00000367569 CTC1Q2NKJ3 1217 aa16.26■□□□□ 0.19
SF3B5-201ENST00000367569 TMEM31Q5JXX7 168 aa16.26■□□□□ 0.19
SF3B5-201ENST00000367569 CDR2LQ86X02 465 aaPredicted RBP16.26■□□□□ 0.19
SF3B5-201ENST00000367569 RASSF8Q8NHQ8 419 aa16.26■□□□□ 0.19
SF3B5-201ENST00000367569 LPPQ93052 612 aa16.26■□□□□ 0.19
SF3B5-201ENST00000367569 CPB2Q96IY4 423 aa16.26■□□□□ 0.19
SF3B5-201ENST00000367569 CDK5RAP3Q96JB5 506 aa16.26■□□□□ 0.19
SF3B5-201ENST00000367569 USP20Q9Y2K6 914 aa16.26■□□□□ 0.19
SF3B5-201ENST00000367569 TBKBP1A7MCY6 615 aa16.25■□□□□ 0.19
SF3B5-201ENST00000367569 INO80B-WBP1J3KQ70 363 aa16.25■□□□□ 0.19
SF3B5-201ENST00000367569 B4GALT5O43286 388 aa16.25■□□□□ 0.19
SF3B5-201ENST00000367569 GAS2O43903 313 aaKnown RBP16.25■□□□□ 0.19
SF3B5-201ENST00000367569 GPR37L1O60883 481 aa16.25■□□□□ 0.19
SF3B5-201ENST00000367569 ITGB1P05556 798 aa16.25■□□□□ 0.19
SF3B5-201ENST00000367569 ZSCAN20P17040 1043 aaPredicted RBP16.25■□□□□ 0.19
SF3B5-201ENST00000367569 ARL2P36404 184 aa16.25■□□□□ 0.19
SF3B5-201ENST00000367569 DHX8Q14562 1220 aaKnown RBP16.25■□□□□ 0.19
SF3B5-201ENST00000367569 KARSQ15046 597 aaKnown RBP16.25■□□□□ 0.19
SF3B5-201ENST00000367569 ODR4Q5SWX8 454 aa16.25■□□□□ 0.19
SF3B5-201ENST00000367569 ARL6IP4Q66PJ3 421 aaKnown RBP16.25■□□□□ 0.19
SF3B5-201ENST00000367569 TWF2Q6IBS0 349 aaKnown RBP16.25■□□□□ 0.19
SF3B5-201ENST00000367569 USP49Q70CQ1 688 aa16.25■□□□□ 0.19
SF3B5-201ENST00000367569 KLHL23Q8NBE8 558 aa16.25■□□□□ 0.19
SF3B5-201ENST00000367569 SPPL3Q8TCT6 385 aa16.25■□□□□ 0.19
SF3B5-201ENST00000367569 P2RX5Q93086 422 aa16.25■□□□□ 0.19
SF3B5-201ENST00000367569 INO80BQ9C086 356 aaPredicted RBP16.25■□□□□ 0.19
SF3B5-201ENST00000367569 CSRNP2Q9H175 543 aa16.25■□□□□ 0.19
SF3B5-201ENST00000367569 IGFLR1Q9H665 355 aa16.25■□□□□ 0.19
SF3B5-201ENST00000367569 TFIP11Q9UBB9 837 aaKnown RBP16.25■□□□□ 0.19
SF3B5-201ENST00000367569 FBXO2Q9UK22 296 aaPredicted RBP16.25■□□□□ 0.19
SF3B5-201ENST00000367569 PCDHB7Q9Y5E2 793 aa16.25■□□□□ 0.19
SF3B5-201ENST00000367569 C5orf42Q9H799 3197 aa16.24■□□□□ 0.19
SF3B5-201ENST00000367569 NPHP3-ACAD11A0A0J9YXS1 232 aa16.24■□□□□ 0.19
SF3B5-201ENST00000367569 MEIS3P2A8K0S8 358 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms