RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 TNFAIP1Q13829 316 aa13.07□□□□□ -0.32
SHPRH-202ENST00000367503 TEDDM1Q5T9Z0 273 aa13.07□□□□□ -0.32
SHPRH-202ENST00000367503 RFX6Q8HWS3 928 aa13.07□□□□□ -0.32
SHPRH-202ENST00000367503 ROPN1BQ9BZX4 212 aaPredicted RBP13.07□□□□□ -0.32
SHPRH-202ENST00000367503 WWP1Q9H0M0 922 aa13.07□□□□□ -0.32
SHPRH-202ENST00000367503 DCLRE1BQ9H816 532 aa13.07□□□□□ -0.32
SHPRH-202ENST00000367503 ROPN1Q9HAT0 212 aaPredicted RBP13.07□□□□□ -0.32
SHPRH-202ENST00000367503 PCDHB4Q9Y5E5 795 aa13.07□□□□□ -0.32
SHPRH-202ENST00000367503 POLR1AO95602 1720 aaPredicted RBP13.07□□□□□ -0.32
SHPRH-202ENST00000367503 S100BP04271 92 aaPredicted RBP13.06□□□□□ -0.32
SHPRH-202ENST00000367503 ENO1P06733 434 aaKnown RBP13.06□□□□□ -0.32
SHPRH-202ENST00000367503 CACNA2D1P54289 1103 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 ARL4CP56559 192 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 KIF22Q14807 665 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 STOX1Q6ZVD7 989 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 TRABDQ9H4I3 376 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 ORC6Q9Y5N6 252 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 CDH16O75309 829 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 UBOX5O94941 541 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 TARSP26639 723 aaKnown RBP13.06□□□□□ -0.32
SHPRH-202ENST00000367503 KDSRQ06136 332 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 TMEM259Q4ZIN3 620 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 KIAA0825Q8IV33 1275 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 GUF1Q8N442 669 aaKnown RBP13.06□□□□□ -0.32
SHPRH-202ENST00000367503 RNF169Q8NCN4 708 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 MTBPQ96DY7 904 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 EHD4Q9H223 541 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 PALLDQ8WX93 1383 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 O00370 1275 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 LPXNO60711 386 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 ATP4AP20648 1035 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 DYNLL2Q96FJ2 89 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 CFAP36Q96G28 342 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 KIFC3Q9BVG8 833 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 BSDC1Q9NW68 430 aaPredicted RBP13.06□□□□□ -0.32
SHPRH-202ENST00000367503 TFR2Q9UP52 801 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 FAM47DPA6NHR8 397 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 CAPN9O14815 690 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 SAT1P21673 171 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 ELF3P78545 371 aaPredicted RBP13.06□□□□□ -0.32
SHPRH-202ENST00000367503 DPYDQ12882 1025 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 PROCA1Q8NCQ7 364 aaPredicted RBP13.06□□□□□ -0.32
SHPRH-202ENST00000367503 TRIM15Q9C019 465 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 NRBP2Q9NSY0 501 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 DMGDHQ9UI17 866 aaKnown RBP13.06□□□□□ -0.32
SHPRH-202ENST00000367503 ZNF229Q9UJW7 825 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 UNC13BO14795 1591 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 USP17L3A6NCW0 530 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 USP17L4A6NCW7 530 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 GNGT2O14610 69 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 HDAC4P56524 1084 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 ROR2Q01974 943 aaKnown RBP13.06□□□□□ -0.32
SHPRH-202ENST00000367503 TRIP10Q15642 601 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 KCTD1Q719H9 257 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 USP17L1Q7RTZ2 530 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 COL23A1Q86Y22 540 aaPredicted RBP13.06□□□□□ -0.32
SHPRH-202ENST00000367503 CCDC117Q8IWD4 279 aaPredicted RBP13.06□□□□□ -0.32
SHPRH-202ENST00000367503 ASCC2Q9H1I8 757 aaPredicted RBP13.06□□□□□ -0.32
SHPRH-202ENST00000367503 CCPG1Q9ULG6 757 aa13.06□□□□□ -0.32
SHPRH-202ENST00000367503 LRRIQ4A6NIV6 560 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 KCNA4P22459 653 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 POLGP54098 1239 aaPredicted RBP13.05□□□□□ -0.32
SHPRH-202ENST00000367503 MRPS15P82914 257 aaKnown RBP13.05□□□□□ -0.32
SHPRH-202ENST00000367503 ATP2C1P98194 919 aaPredicted RBP13.05□□□□□ -0.32
SHPRH-202ENST00000367503 THOC5Q13769 683 aaKnown RBP13.05□□□□□ -0.32
SHPRH-202ENST00000367503 SLC18A3Q16572 532 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 RANBP17Q9H2T7 1088 aaKnown RBP13.05□□□□□ -0.32
SHPRH-202ENST00000367503 DDX28Q9NUL7 540 aaKnown RBP13.05□□□□□ -0.32
SHPRH-202ENST00000367503 MEIS1O00470 390 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 ARHGEF9O43307 516 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 GPC5P78333 572 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 IL1RL1Q01638 556 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 RABL6Q3YEC7 729 aaPredicted RBP13.05□□□□□ -0.32
SHPRH-202ENST00000367503 CASP10Q92851 521 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 CEP19Q96LK0 163 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 BAG5Q9UL15 447 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 BBOX1O75936 387 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 SYF2O95926 243 aaKnown RBP13.05□□□□□ -0.32
SHPRH-202ENST00000367503 BMP3P12645 472 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 PRLRP16471 622 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 ECE1P42892 770 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 CDK8P49336 464 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 TRIM59Q8IWR1 403 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 CATSPER2Q96P56 530 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 DHX36Q9H2U1 1008 aaKnown RBP13.05□□□□□ -0.32
SHPRH-202ENST00000367503 AS3MTQ9HBK9 375 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 MRPL40Q9NQ50 206 aaKnown RBP13.05□□□□□ -0.32
SHPRH-202ENST00000367503 AFG3L2Q9Y4W6 797 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 PPIP5K2O43314 1243 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 ATP9AO75110 1047 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 HSPA4LO95757 839 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 SLC16A2P36021 539 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 BTKQ06187 659 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 KYNUQ16719 465 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 ELOA2Q8IYF1 753 aaPredicted RBP13.05□□□□□ -0.32
SHPRH-202ENST00000367503 RFFLQ8WZ73 363 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 CSRNP1Q96S65 589 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 ING2Q9H160 280 aa13.05□□□□□ -0.32
SHPRH-202ENST00000367503 CYP27B1O15528 508 aa13.04□□□□□ -0.32
SHPRH-202ENST00000367503 DYNLT1P63172 113 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms