RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 HELQQ8TDG4 1101 aa26.31■■□□□ 1.8
SHC1-201ENST00000366442 CCDC43Q96MW1 224 aaKnown RBP26.31■■□□□ 1.8
SHC1-201ENST00000366442 MINDY3Q9H8M7 445 aa26.31■■□□□ 1.8
SHC1-201ENST00000366442 TLR9Q9NR96 1032 aa26.31■■□□□ 1.8
SHC1-201ENST00000366442 NOL7Q9UMY1 257 aaKnown RBP26.31■■□□□ 1.8
SHC1-201ENST00000366442 KIF3AQ9Y496 699 aa26.31■■□□□ 1.8
SHC1-201ENST00000366442 CSPG5O95196 566 aa26.3■■□□□ 1.8
SHC1-201ENST00000366442 PPM1AP35813 382 aa26.3■■□□□ 1.8
SHC1-201ENST00000366442 TECP42680 631 aa26.3■■□□□ 1.8
SHC1-201ENST00000366442 POU5F1BQ06416 359 aa26.3■■□□□ 1.8
SHC1-201ENST00000366442 PDE12Q6L8Q7 609 aaKnown RBP26.3■■□□□ 1.8
SHC1-201ENST00000366442 KCNT2Q6UVM3 1135 aa26.3■■□□□ 1.8
SHC1-201ENST00000366442 EP400NLQ6ZTU2 488 aa26.3■■□□□ 1.8
SHC1-201ENST00000366442 ERMNQ8TAM6 284 aa26.3■■□□□ 1.8
SHC1-201ENST00000366442 ZNF558Q96NG5 402 aa26.3■■□□□ 1.8
SHC1-201ENST00000366442 POLR3CQ9BUI4 534 aaPredicted RBP26.3■■□□□ 1.8
SHC1-201ENST00000366442 ARL2P36404 184 aa26.29■■□□□ 1.8
SHC1-201ENST00000366442 PTENP60484 403 aa26.29■■□□□ 1.8
SHC1-201ENST00000366442 TFDP1Q14186 410 aa26.29■■□□□ 1.8
SHC1-201ENST00000366442 CATSPER3Q86XQ3 398 aa26.29■■□□□ 1.8
SHC1-201ENST00000366442 IFNLR1Q8IU57 520 aaPredicted RBP26.29■■□□□ 1.8
SHC1-201ENST00000366442 PIGOQ8TEQ8 1089 aa26.29■■□□□ 1.8
SHC1-201ENST00000366442 MRPS27Q92552 414 aaKnown RBP26.29■■□□□ 1.8
SHC1-201ENST00000366442 FAM50BQ9Y247 325 aa26.29■■□□□ 1.8
SHC1-201ENST00000366442 HOXA11P31270 313 aaPredicted RBP26.28■■□□□ 1.8
SHC1-201ENST00000366442 GTF2F1P35269 517 aaKnown RBP eCLIP26.28■■□□□ 1.8
SHC1-201ENST00000366442 ADAM15Q13444 863 aa26.28■■□□□ 1.8
SHC1-201ENST00000366442 ADGRD2Q7Z7M1 963 aa26.28■■□□□ 1.8
SHC1-201ENST00000366442 EFHBQ8N7U6 833 aa26.28■■□□□ 1.8
SHC1-201ENST00000366442 TMX3Q96JJ7 454 aa26.28■■□□□ 1.8
SHC1-201ENST00000366442 IGFLR1Q9H665 355 aa26.28■■□□□ 1.8
SHC1-201ENST00000366442 PUF60Q9UHX1 559 aaKnown RBP26.28■■□□□ 1.8
SHC1-201ENST00000366442 DBR1Q9UK59 544 aaKnown RBP26.28■■□□□ 1.8
SHC1-201ENST00000366442 CARNS1A5YM72 827 aa26.27■■□□□ 1.8
SHC1-201ENST00000366442 FSCN2O14926 492 aa26.27■■□□□ 1.8
SHC1-201ENST00000366442 MED24O75448 989 aa26.27■■□□□ 1.8
SHC1-201ENST00000366442 IL9P15248 144 aa26.27■■□□□ 1.8
SHC1-201ENST00000366442 RPA1P27694 616 aa26.27■■□□□ 1.8
SHC1-201ENST00000366442 MCM2P49736 904 aa26.27■■□□□ 1.8
SHC1-201ENST00000366442 GLB1LQ6UWU2 654 aa26.27■■□□□ 1.8
SHC1-201ENST00000366442 FAM178BQ8IXR5 827 aa26.27■■□□□ 1.8
SHC1-201ENST00000366442 C4orf32Q8N8J7 132 aa26.27■■□□□ 1.8
SHC1-201ENST00000366442 MICAL1Q8TDZ2 1067 aa26.27■■□□□ 1.8
SHC1-201ENST00000366442 PGBD4Q96DM1 585 aa26.27■■□□□ 1.8
SHC1-201ENST00000366442 NACC1Q96RE7 527 aa26.27■■□□□ 1.8
SHC1-201ENST00000366442 NFKBIZQ9BYH8 718 aa26.27■■□□□ 1.8
SHC1-201ENST00000366442 SPG21Q9NZD8 308 aa26.27■■□□□ 1.8
SHC1-201ENST00000366442 PCDHB2Q9Y5E7 798 aa26.27■■□□□ 1.8
SHC1-201ENST00000366442 FSD2A1L4K1 749 aa26.26■■□□□ 1.79
SHC1-201ENST00000366442 MUTP22033 750 aa26.26■■□□□ 1.79
SHC1-201ENST00000366442 AXLP30530 894 aa26.26■■□□□ 1.79
SHC1-201ENST00000366442 FXR2P51116 673 aaKnown RBP eCLIP26.26■■□□□ 1.79
SHC1-201ENST00000366442 KRT17Q04695 432 aa26.26■■□□□ 1.79
SHC1-201ENST00000366442 DLX2Q07687 328 aaPredicted RBP26.26■■□□□ 1.79
SHC1-201ENST00000366442 MRPL10Q7Z7H8 261 aaKnown RBP26.26■■□□□ 1.79
SHC1-201ENST00000366442 ASAP3Q8TDY4 903 aa26.26■■□□□ 1.79
SHC1-201ENST00000366442 LPPQ93052 612 aa26.26■■□□□ 1.79
SHC1-201ENST00000366442 TBC1D32Q96NH3 1257 aa26.26■■□□□ 1.79
SHC1-201ENST00000366442 TBX10O75333 385 aa26.25■■□□□ 1.79
SHC1-201ENST00000366442 ERLIN2O94905 339 aa26.25■■□□□ 1.79
SHC1-201ENST00000366442 NRIP1P48552 1158 aa26.25■■□□□ 1.79
SHC1-201ENST00000366442 ERVFC1P60507 584 aa26.25■■□□□ 1.79
SHC1-201ENST00000366442 CAPSQ13938 189 aa26.25■■□□□ 1.79
SHC1-201ENST00000366442 HAUS3Q68CZ6 603 aa26.25■■□□□ 1.79
SHC1-201ENST00000366442 SLC39A11Q8N1S5 342 aa26.25■■□□□ 1.79
SHC1-201ENST00000366442 CCDC51Q96ER9 411 aa26.25■■□□□ 1.79
SHC1-201ENST00000366442 CDCA3Q99618 268 aaPredicted RBP26.25■■□□□ 1.79
SHC1-201ENST00000366442 TLE6Q9H808 572 aa26.25■■□□□ 1.79
SHC1-201ENST00000366442 PCDHGC5Q9Y5F6 944 aa26.25■■□□□ 1.79
SHC1-201ENST00000366442 A0A087WWV3 80 aa26.24■■□□□ 1.79
SHC1-201ENST00000366442 LINC01565O15544 149 aa26.24■■□□□ 1.79
SHC1-201ENST00000366442 OFD1O75665 1012 aa26.24■■□□□ 1.79
SHC1-201ENST00000366442 CD2BP2O95400 341 aaKnown RBP26.24■■□□□ 1.79
SHC1-201ENST00000366442 GLRA2P23416 452 aa26.24■■□□□ 1.79
SHC1-201ENST00000366442 PBX3P40426 434 aa26.24■■□□□ 1.79
SHC1-201ENST00000366442 ALDH7A1P49419 539 aaKnown RBP26.24■■□□□ 1.79
SHC1-201ENST00000366442 TOB1P50616 345 aaPredicted RBP26.24■■□□□ 1.79
SHC1-201ENST00000366442 NOMO2Q5JPE7 1267 aa26.24■■□□□ 1.79
SHC1-201ENST00000366442 UBXN11Q5T124 520 aa26.24■■□□□ 1.79
SHC1-201ENST00000366442 MCPH1Q8NEM0 835 aa26.24■■□□□ 1.79
SHC1-201ENST00000366442 NGRNQ9NPE2 291 aaKnown RBP26.24■■□□□ 1.79
SHC1-201ENST00000366442 CNTNAP2Q9UHC6 1331 aa26.23■■□□□ 1.79
SHC1-201ENST00000366442 MEIS3P2A8K0S8 358 aa26.23■■□□□ 1.79
SHC1-201ENST00000366442 TSPAN1O60635 241 aa26.23■■□□□ 1.79
SHC1-201ENST00000366442 USO1O60763 962 aaKnown RBP26.23■■□□□ 1.79
SHC1-201ENST00000366442 NDUFV1P49821 464 aa26.23■■□□□ 1.79
SHC1-201ENST00000366442 BCAR1P56945 870 aa26.23■■□□□ 1.79
SHC1-201ENST00000366442 MBTD1Q05BQ5 628 aa26.23■■□□□ 1.79
SHC1-201ENST00000366442 NCBP1Q09161 790 aaKnown RBP26.23■■□□□ 1.79
SHC1-201ENST00000366442 PDIA5Q14554 519 aa26.23■■□□□ 1.79
SHC1-201ENST00000366442 NBR1Q14596 966 aa26.23■■□□□ 1.79
SHC1-201ENST00000366442 NOTUMQ6P988 496 aa26.23■■□□□ 1.79
SHC1-201ENST00000366442 POTEGQ6S5H5 508 aa26.23■■□□□ 1.79
SHC1-201ENST00000366442 CNNM3Q8NE01 707 aa26.23■■□□□ 1.79
SHC1-201ENST00000366442 POLR3FQ9H1D9 316 aaPredicted RBP26.23■■□□□ 1.79
SHC1-201ENST00000366442 TBC1D13Q9NVG8 400 aa26.23■■□□□ 1.79
SHC1-201ENST00000366442 PRKAG3Q9UGI9 489 aa26.23■■□□□ 1.79
SHC1-201ENST00000366442 STK24Q9Y6E0 443 aa26.23■■□□□ 1.79
SHC1-201ENST00000366442 INO80B-WBP1J3KQ70 363 aa26.22■■□□□ 1.79
SHC1-201ENST00000366442 LAD1O00515 517 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms