RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 MRPL10Q7Z7H8 261 aaKnown RBP15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 FERMT3Q86UX7 667 aa15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 IFNLR1Q8IU57 520 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 THNSL1Q8IYQ7 743 aa15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 GJD3Q8N144 294 aa15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 TCP11Q8WWU5 503 aa15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 PPP2R3CQ969Q6 453 aa15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 C8orf76Q96K31 380 aa15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 FOXP1Q9H334 677 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 SH2B1Q9NRF2 756 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 FAM105AQ9NUU6 356 aa15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 PRKAG3Q9UGI9 489 aa15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 PIN4Q9Y237 131 aaKnown RBP15.26■□□□□ 0.03
TNFRSF1A-202ENST00000366159 TRIOO75962 3097 aa15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 MEIS3P2A8K0S8 358 aa15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 OFD1O75665 1012 aa15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 SRGAP2CP0DJJ0 459 aa15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 SKIP12755 728 aa15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 XRCC6P12956 609 aaKnown RBP eCLIP15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 PBX3P40426 434 aa15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 NRIP1P48552 1158 aa15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 RARRES1P49788 294 aa15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 HMGN5P82970 282 aaKnown RBP15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 ZP2Q05996 745 aa15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 COASYQ13057 564 aa15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 UBXN11Q5T124 520 aa15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 EP400NLQ6ZTU2 488 aa15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 ABI1Q8IZP0 508 aa15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 SLC39A11Q8N1S5 342 aa15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 RNF169Q8NCN4 708 aa15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 ZNF558Q96NG5 402 aa15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 MTRQ99707 1265 aa15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 C1QTNF1Q9BXJ1 281 aa15.25■□□□□ 0.03
TNFRSF1A-202ENST00000366159 POTEMA6NI47 508 aa15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 DGAT1O75907 488 aa15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 PPM1AP35813 382 aa15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 ARL2P36404 184 aa15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 RAB27AP51159 221 aa15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 PTENP60484 403 aa15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 ORC2Q13416 577 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 SMAD4Q13485 552 aaKnown RBP15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 PCBP1Q15365 356 aaKnown RBP eCLIP15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 SAFBQ15424 915 aaKnown RBP eCLIP15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 DUSP6Q16828 381 aa15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 TWF2Q6IBS0 349 aaKnown RBP15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 TMEM184AQ6ZMB5 413 aa15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 RBM23Q86U06 439 aaKnown RBP15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 ADHFE1Q8IWW8 467 aa15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 C4orf32Q8N8J7 132 aa15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 RNF149Q8NC42 400 aa15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 VN1R2Q8NFZ6 395 aa15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 LPPQ93052 612 aa15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 CDCA3Q99618 268 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 MRPL9Q9BYD2 267 aaKnown RBP15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 TLE6Q9H808 572 aa15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 C11orf16Q9NQ32 467 aa15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 BMP2KQ9NSY1 1161 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 SPG21Q9NZD8 308 aa15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 CD207Q9UJ71 328 aa15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 FAM50BQ9Y247 325 aa15.24■□□□□ 0.03
TNFRSF1A-202ENST00000366159 PER2O15055 1255 aa15.23■□□□□ 0.03
TNFRSF1A-202ENST00000366159 U2AF2P26368 475 aaKnown RBP eCLIP15.23■□□□□ 0.03
TNFRSF1A-202ENST00000366159 MCM7P33993 719 aa15.23■□□□□ 0.03
TNFRSF1A-202ENST00000366159 BCAR1P56945 870 aa15.23■□□□□ 0.03
TNFRSF1A-202ENST00000366159 MXD4Q14582 209 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF1A-202ENST00000366159 CLUL1Q15846 466 aa15.23■□□□□ 0.03
TNFRSF1A-202ENST00000366159 AMHR2Q16671 573 aa15.23■□□□□ 0.03
TNFRSF1A-202ENST00000366159 AGMOQ6ZNB7 445 aa15.23■□□□□ 0.03
TNFRSF1A-202ENST00000366159 CATSPER3Q86XQ3 398 aa15.23■□□□□ 0.03
TNFRSF1A-202ENST00000366159 NOSTRINQ8IVI9 506 aa15.23■□□□□ 0.03
TNFRSF1A-202ENST00000366159 SMRP1Q8NCR6 262 aa15.23■□□□□ 0.03
TNFRSF1A-202ENST00000366159 ASAP3Q8TDY4 903 aa15.23■□□□□ 0.03
TNFRSF1A-202ENST00000366159 PIGOQ8TEQ8 1089 aa15.23■□□□□ 0.03
TNFRSF1A-202ENST00000366159 POLR3CQ9BUI4 534 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF1A-202ENST00000366159 NFKBIZQ9BYH8 718 aa15.23■□□□□ 0.03
TNFRSF1A-202ENST00000366159 TUFT1Q9NNX1 390 aa15.23■□□□□ 0.03
TNFRSF1A-202ENST00000366159 NGRNQ9NPE2 291 aaKnown RBP15.23■□□□□ 0.03
TNFRSF1A-202ENST00000366159 PCDHB2Q9Y5E7 798 aa15.23■□□□□ 0.03
TNFRSF1A-202ENST00000366159 A0A087WWV3 80 aa15.22■□□□□ 0.03
TNFRSF1A-202ENST00000366159 HIDE1A8MVS5 230 aa15.22■□□□□ 0.03
TNFRSF1A-202ENST00000366159 MED24O75448 989 aa15.22■□□□□ 0.03
TNFRSF1A-202ENST00000366159 GLRA2P23416 452 aa15.22■□□□□ 0.03
TNFRSF1A-202ENST00000366159 NDUFV1P49821 464 aa15.22■□□□□ 0.03
TNFRSF1A-202ENST00000366159 AFF1P51825 1210 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-202ENST00000366159 RBM10P98175 930 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-202ENST00000366159 KRT17Q04695 432 aa15.22■□□□□ 0.03
TNFRSF1A-202ENST00000366159 CAPSQ13938 189 aa15.22■□□□□ 0.03
TNFRSF1A-202ENST00000366159 ZNF174Q15697 407 aa15.22■□□□□ 0.03
TNFRSF1A-202ENST00000366159 MICAL1Q8TDZ2 1067 aa15.22■□□□□ 0.03
TNFRSF1A-202ENST00000366159 TCF25Q9BQ70 676 aa15.22■□□□□ 0.03
TNFRSF1A-202ENST00000366159 NRDE2Q9H7Z3 1164 aa15.22■□□□□ 0.03
TNFRSF1A-202ENST00000366159 TBC1D13Q9NVG8 400 aa15.22■□□□□ 0.03
TNFRSF1A-202ENST00000366159 PUF60Q9UHX1 559 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-202ENST00000366159 DBR1Q9UK59 544 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-202ENST00000366159 BARX2Q9UMQ3 279 aaPredicted RBP15.22■□□□□ 0.03
TNFRSF1A-202ENST00000366159 FSD2A1L4K1 749 aa15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 INPPL1O15357 1258 aa15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 B4GALT3O60512 393 aa15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 TSPAN1O60635 241 aa15.21■□□□□ 0.03
TNFRSF1A-202ENST00000366159 GPR37L1O60883 481 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms