RNA–Protein interactions for RNA: ENST00000365656.1

RNA5S13-201, Transcript of RNA, 5S ribosomal 13, human

BASIC

Gene RNA5S13, Length 119 nt, Biotype rRNA, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNA5S13-201	ENST00000365656	PLCG1	P19174	1290 aa		11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	LONP1	P36776	959 aa	Known RBP	11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	PHKA2	P46019	1235 aa		11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	BTG3	Q14201	252 aa	Predicted RBP	11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	SLC39A14	Q15043	492 aa		11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	KARS	Q15046	597 aa	Known RBP	11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	LRRC55	Q6ZSA7	311 aa		11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	FAM43B	Q6ZT52	329 aa	Predicted RBP	11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	TMEM192	Q8IY95	271 aa		11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	FIBCD1	Q8N539	461 aa		11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	LPP	Q93052	612 aa		11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	CPB2	Q96IY4	423 aa		11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	EPSTI1	Q96J88	318 aa		11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	AK8	Q96MA6	479 aa		11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	CASD1	Q96PB1	797 aa		11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	NFKBIZ	Q9BYH8	718 aa		11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	INO80B	Q9C086	356 aa	Predicted RBP	11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	ELAC1	Q9H777	363 aa	Known RBP	11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	CHST12	Q9NRB3	414 aa		11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	TFIP11	Q9UBB9	837 aa	Known RBP	11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	DNM3	Q9UQ16	869 aa		11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	USP20	Q9Y2K6	914 aa		11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	SRPRB	Q9Y5M8	271 aa	Known RBP	11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	MTCH2	Q9Y6C9	303 aa		11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	STK24	Q9Y6E0	443 aa		11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.81	□□□□□ -0.52
RNA5S13-201	ENST00000365656	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	LRRIQ4	A6NIV6	560 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	TBKBP1	A7MCY6	615 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	C5orf67	F2Z3F1	127 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	INO80B-WBP1	J3KQ70	363 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	HIP1R	O75146	1068 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	PLA2G4B	P0C869	781 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	ZSCAN20	P17040	1043 aa	Predicted RBP	11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	ARF4	P18085	180 aa	Predicted RBP	11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	POU3F3	P20264	500 aa	Predicted RBP	11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	IGFBP4	P22692	258 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	BMPR1A	P36894	532 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	AFF1	P51825	1210 aa	Known RBP	11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	TFDP1	Q14186	410 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	LONRF3	Q496Y0	759 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	ARSH	Q5FYA8	562 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	TWF2	Q6IBS0	349 aa	Known RBP	11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	CDR2L	Q86X02	465 aa	Predicted RBP	11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	SYT2	Q8N9I0	419 aa	Predicted RBP	11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	RNF169	Q8NCN4	708 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	LINC00301	Q8NCQ3	95 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	FBXO22	Q8NEZ5	403 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	SYMPK	Q92797	1274 aa	Known RBP	11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	GAS2L1	Q99501	681 aa	Predicted RBP	11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	EIF2A	Q9BY44	585 aa	Known RBP	11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	CCSER1	Q9C0I3	900 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	CCDC113	Q9H0I3	377 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	CWH43	Q9H720	699 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	PRDM6	Q9NQX0	595 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	FAM105A	Q9NUU6	356 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	LRFN2	Q9ULH4	789 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	UNC80	Q8N2C7	3258 aa		11.8	□□□□□ -0.52
RNA5S13-201	ENST00000365656	COL4A4	P53420	1690 aa	Predicted RBP	11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656		A0A087X0B3	334 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	B4GALT3	O60512	393 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	ZNF623	O75123	536 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	BRD1	O95696	1058 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	GUCY2C	P25092	1073 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	CTNNB1	P35222	781 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	UBA7	P41226	1012 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	NAMPT	P43490	491 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	RAD51AP2	Q09MP3	1159 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	CAMK1	Q14012	370 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	NAALADL2	Q58DX5	795 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	PPP4R3CP	Q6ZMV5	832 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	AGMO	Q6ZNB7	445 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	TAS1R3	Q7RTX0	852 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	SMG8	Q8ND04	991 aa	Known RBP	11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	HELQ	Q8TDG4	1101 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	TMEM117	Q9H0C3	514 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	NT5C3A	Q9H0P0	336 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	RNF39	Q9H2S5	420 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	FZD8	Q9H461	694 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	TYW1	Q9NV66	732 aa	Known RBP	11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	DACT1	Q9NYF0	836 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	PCDHB2	Q9Y5E7	798 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656	MYO9B	Q13459	2157 aa		11.79	□□□□□ -0.52
RNA5S13-201	ENST00000365656		A0A0C4DFX4	3053 aa		11.78	□□□□□ -0.52
RNA5S13-201	ENST00000365656	XIRP2	A4UGR9	3374 aa		11.78	□□□□□ -0.52
RNA5S13-201	ENST00000365656	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.78	□□□□□ -0.52
RNA5S13-201	ENST00000365656	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.78	□□□□□ -0.52
RNA5S13-201	ENST00000365656	SFI1	A8K8P3	1242 aa		11.78	□□□□□ -0.52
RNA5S13-201	ENST00000365656		H3BNC9	293 aa		11.78	□□□□□ -0.52
RNA5S13-201	ENST00000365656	GRM6	O15303	877 aa		11.78	□□□□□ -0.52
RNA5S13-201	ENST00000365656	SLC26A4	O43511	780 aa		11.78	□□□□□ -0.52
RNA5S13-201	ENST00000365656	ERLIN2	O94905	339 aa		11.78	□□□□□ -0.52
RNA5S13-201	ENST00000365656	EOMES	O95936	686 aa		11.78	□□□□□ -0.52
RNA5S13-201	ENST00000365656	SSB	P05455	408 aa	Known RBP eCLIP	11.78	□□□□□ -0.52
RNA5S13-201	ENST00000365656	DNAJB1	P25685	340 aa		11.78	□□□□□ -0.52
RNA5S13-201	ENST00000365656	PBX3	P40426	434 aa		11.78	□□□□□ -0.52
RNA5S13-201	ENST00000365656	NPTX2	P47972	431 aa		11.78	□□□□□ -0.52
RNA5S13-201	ENST00000365656	CACNB1	Q02641	598 aa	Predicted RBP	11.78	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms