RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 RCBTB1Q8NDN9 531 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 DBF4BQ8NFT6 615 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 SLC7A14Q8TBB6 771 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 PDLIM2Q96JY6 352 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 FGD4Q96M96 766 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 GPHA2Q96T91 129 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 TIMP4Q99727 224 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 CPPED1Q9BRF8 314 aaPredicted RBP0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 OR10A5Q9H207 317 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 HIPK2Q9H2X6 1198 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 NKX2-4Q9H2Z4 354 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 CPNE5Q9HCH3 593 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 KCNQ5Q9NR82 932 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 DKK2Q9UBU2 259 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 FBXL7Q9UJT9 491 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 HDAC5Q9UQL6 1122 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 DMTF1Q9Y222 760 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 USTQ9Y2C2 406 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 EMC9Q9Y3B6 208 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 CCDC9Q9Y3X0 531 aaKnown RBP0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 USP31Q70CQ4 1352 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 CCDC151A5D8V7 595 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 ANKRD34BA5PLL1 514 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 SOWAHDA6NJG2 315 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 SOCS2O14508 198 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 NRP1O14786 923 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 TNFRSF13BO14836 293 aaPredicted RBP0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 GREM1O60565 184 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 MAFO75444 373 aaPredicted RBP0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 CDKL5O76039 1030 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 SPDEFO95238 335 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 CPP00450 1065 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 VSIG10L2P0DP72 767 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 APOBEC3AP31941 199 aaPredicted RBP0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 EIF4A3P38919 411 aaKnown RBP0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 ECE1P42892 770 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 CXCR3P49682 368 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 LINC00205P59089 165 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 CD83Q01151 205 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 SLC7A5Q01650 507 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 LEXMQ3ZCV2 418 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 SPDYE7PQ495Y7 208 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 FBXL19Q6PCT2 694 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 NPNTQ6UXI9 565 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 FAM83AQ86UY5 434 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 CCDC103Q8IW40 242 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 PPIL6Q8IXY8 311 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 NLGN4XQ8N0W4 816 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 BVESQ8NE79 360 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 NKD1Q969G9 470 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 Q96MF0 132 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 ASB16Q96NS5 453 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 EPC1Q9H2F5 836 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 SLCO5A1Q9H2Y9 848 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 TBCCD1Q9NVR7 557 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 FOXJ2Q9P0K8 574 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 NCDNQ9UBB6 729 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 DSEQ9UL01 958 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 ZNRF3Q9ULT6 936 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 CHST2Q9Y4C5 530 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 PCDHAC2Q9Y5I4 1007 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 ENTPD2Q9Y5L3 495 aa0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 RBM8AQ9Y5S9 174 aaKnown RBP0.7□□□□□ -2.3
RNU6-54P-201ENST00000365563 A0A1B0GVY2 172 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 FAM221BA6H8Z2 402 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 ADAM10O14672 748 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 TOP3BO95985 862 aaKnown RBP0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 ALPLP05186 524 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 P4HBP07237 508 aaKnown RBP0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 AOAHP28039 575 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 HOXC12P31275 282 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 TAF6P49848 677 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 ZNF143P52747 638 aaPredicted RBP0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 PTTG1IPP53801 180 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 ADAM8P78325 824 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 E2F1Q01094 437 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 TWIST1Q15672 202 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 BTBD8Q5XKL5 378 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 KANK2Q63ZY3 851 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 LVRNQ6Q4G3 990 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 EP400NLQ6ZTU2 488 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 SH2D6Q7Z4S9 175 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 YTHDF3Q7Z739 585 aaKnown RBP0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 MRPL10Q7Z7H8 261 aaKnown RBP0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 TXNDC2Q86VQ3 553 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 TRIM59Q8IWR1 403 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 RBM12BQ8IXT5 1001 aaKnown RBP0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 CMTM4Q8IZR5 234 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 OR52N2Q8NGI0 321 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 CALML6Q8TD86 181 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 DNASE2BQ8WZ79 361 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 ARMC5Q96C12 935 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 CCDC140Q96MF4 163 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 FERD3LQ96RJ6 166 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 VPS16Q9H269 839 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 C14orf93Q9H972 538 aaKnown RBP0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 CASS4Q9NQ75 786 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 ACSS2Q9NR19 701 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 KBTBD4Q9NVX7 518 aa0.69□□□□□ -2.3
RNU6-54P-201ENST00000365563 SAE1Q9UBE0 346 aaPredicted RBP0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms