RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 CBX4O00257 560 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 NRP1O14786 923 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 OPHN1O60890 802 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 STC2O76061 302 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 PRPF6O94906 941 aaKnown RBP3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 ABHD16AO95870 558 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 JMJD7P0C870 316 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 HK1P19367 917 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 KIR2DL3P43628 341 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 COL10A1Q03692 680 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 ADCY1Q08828 1119 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 SF3A1Q15459 793 aaKnown RBP3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 MAN2A1Q16706 1144 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 FAM214AQ32MH5 1076 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 DCAF17Q5H9S7 520 aaPredicted RBP3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 MBNL2Q5VZF2 373 aaKnown RBP3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 LRRC55Q6ZSA7 311 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 UBE2R2Q712K3 238 aaPredicted RBP3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 RHOUQ7L0Q8 258 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 KANSL1Q7Z3B3 1105 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 APBB1IPQ7Z5R6 666 aaPredicted RBP3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 VRK3Q8IV63 474 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 CPT1CQ8TCG5 803 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 PROKR1Q8TCW9 393 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 FAM193BQ96PV7 902 aaPredicted RBP3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 ELF4Q99607 663 aaPredicted RBP3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 NOL10Q9BSC4 688 aaKnown RBP3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 OSBPL2Q9H1P3 480 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 TOMM22Q9NS69 142 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 SORCS3Q9UPU3 1222 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 SPO11Q9Y5K1 396 aa3.59□□□□□ -1.83
RNU4-42P-201ENST00000364738 GRXCR1A8MXD5 290 aa3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 FSBPO95073 299 aa3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 SCAF4O95104 1147 aaKnown RBP3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 GCP02774 474 aa3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 ITGB1P05556 798 aa3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 BMS1Q14692 1282 aaKnown RBP3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 CFAP100Q494V2 611 aa3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 LY6G5CQ5SRR4 150 aa3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 CDCA2Q69YH5 1023 aaPredicted RBP3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 NAIF1Q69YI7 327 aaPredicted RBP3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 KIAA1841Q6NSI8 718 aa3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 DPY19L2P1Q6NXN4 242 aa3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 KCNV1Q6PIU1 500 aa3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 RTF1Q92541 710 aaKnown RBP3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 HIST1H2AHQ96KK5 128 aa3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 DNAJC2Q99543 621 aaKnown RBP3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 HIST1H2AJQ99878 128 aa3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 OSBPL6Q9BZF3 934 aa3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 EPC1Q9H2F5 836 aa3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 FZD1Q9UP38 647 aa3.58□□□□□ -1.84
RNU4-42P-201ENST00000364738 A0A0A6YYK5 440 aaPredicted RBP3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 PPP1R12AO14974 1030 aaPredicted RBP3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 TRIM24O15164 1050 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 PPFIA4O75335 1185 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 RECQL4O94761 1208 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 ALDH1A2O94788 518 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 RHOBTB3O94955 611 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 PCDH8O95206 1070 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 GYPEP15421 78 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 SDSP20132 328 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 NR4A1P22736 598 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 PROZP22891 400 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 SQSTM1Q13501 440 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 PTPAQ15257 358 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 NFE2L2Q16236 605 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 CREB3L3Q68CJ9 461 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 UNQ6494/PRO21346Q6UXR6 183 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 ZZZ3Q8IYH5 903 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 UNC5BQ8IZJ1 945 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 PIK3C3Q8NEB9 887 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 CPPED1Q9BRF8 314 aaPredicted RBP3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 SOX7Q9BT81 388 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 ZMAT4Q9H898 229 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 OXSMQ9NWU1 459 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 ING3Q9NXR8 418 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 PODXL2Q9NZ53 605 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 H2AFY2Q9P0M6 372 aaPredicted RBP3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 ZKSCAN5Q9Y2L8 839 aa3.57□□□□□ -1.84
RNU4-42P-201ENST00000364738 ST20-MTHFSA0A0A6YYL1 179 aa3.56□□□□□ -1.84
RNU4-42P-201ENST00000364738 GAS7O60861 476 aa3.56□□□□□ -1.84
RNU4-42P-201ENST00000364738 NUDT3O95989 172 aa3.56□□□□□ -1.84
RNU4-42P-201ENST00000364738 CFBP00751 764 aa3.56□□□□□ -1.84
RNU4-42P-201ENST00000364738 LMNAP02545 664 aaKnown RBP3.56□□□□□ -1.84
RNU4-42P-201ENST00000364738 GAAP10253 952 aa3.56□□□□□ -1.84
RNU4-42P-201ENST00000364738 CD40P25942 277 aa3.56□□□□□ -1.84
RNU4-42P-201ENST00000364738 TIGD2Q4W5G0 525 aa3.56□□□□□ -1.84
RNU4-42P-201ENST00000364738 PLEKHG4Q58EX7 1191 aa3.56□□□□□ -1.84
RNU4-42P-201ENST00000364738 OR5M3Q8NGP4 307 aa3.56□□□□□ -1.84
RNU4-42P-201ENST00000364738 GPR150Q8NGU9 434 aa3.56□□□□□ -1.84
RNU4-42P-201ENST00000364738 FERMT2Q96AC1 680 aa3.56□□□□□ -1.84
RNU4-42P-201ENST00000364738 CPEB1Q9BZB8 566 aaKnown RBP3.56□□□□□ -1.84
RNU4-42P-201ENST00000364738 MAGEC2Q9UBF1 373 aaPredicted RBP3.56□□□□□ -1.84
RNU4-42P-201ENST00000364738 EIF2B4Q9UI10 523 aaKnown RBP3.56□□□□□ -1.84
RNU4-42P-201ENST00000364738 PACSIN3Q9UKS6 424 aa3.56□□□□□ -1.84
RNU4-42P-201ENST00000364738 CDK11AQ9UQ88 783 aaPredicted RBP3.56□□□□□ -1.84
RNU4-42P-201ENST00000364738 PCDHB6Q9Y5E3 794 aa3.56□□□□□ -1.84
RNU4-42P-201ENST00000364738 GRID2IPA4D2P6 1211 aa3.55□□□□□ -1.84
RNU4-42P-201ENST00000364738 HOXA3O43365 443 aaPredicted RBP3.55□□□□□ -1.84
RNU4-42P-201ENST00000364738 B3GALT2O43825 422 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms