RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 SKAP2O75563 359 aaPredicted RBP14.9□□□□□ -0.02
COL6A1-201ENST00000361866 MAN1A1P33908 653 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 STAT2P52630 851 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 TTLL12Q14166 644 aaPredicted RBP14.9□□□□□ -0.02
COL6A1-201ENST00000361866 EPS8L3Q8TE67 593 aaKnown RBP14.9□□□□□ -0.02
COL6A1-201ENST00000361866 CEP170P1Q96L14 293 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 CFAP57Q96MR6 1250 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 KLHL11Q9NVR0 708 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 USH1CQ9Y6N9 552 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 FLT1P17948 1338 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 TMEM120BA0PK00 339 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 SCTRP47872 440 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 ZNF543Q08ER8 600 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 EPC2Q52LR7 807 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 PADI6Q6TGC4 694 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 BARGINQ6ZT62 677 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 KCNK18Q7Z418 384 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 XXYLT1Q8NBI6 393 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 CALN1Q9BXU9 219 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 THAP2Q9H0W7 228 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 GINM1Q9NU53 330 aa14.9□□□□□ -0.02
COL6A1-201ENST00000361866 PALM3A6NDB9 673 aaPredicted RBP14.89□□□□□ -0.03
COL6A1-201ENST00000361866 GOLGA8RI6L899 631 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 RAD23BP54727 409 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 DLGAP5Q15398 846 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 LGSNQ5TDP6 509 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 LMBRD2Q68DH5 695 aaPredicted RBP14.89□□□□□ -0.03
COL6A1-201ENST00000361866 RAB3IL1Q8TBN0 382 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 SREK1Q8WXA9 508 aaKnown RBP14.89□□□□□ -0.03
COL6A1-201ENST00000361866 MAML1Q92585 1016 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 TMEM206Q9H813 350 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 NOD2Q9HC29 1040 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 PI4KBQ9UBF8 816 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 DDX20Q9UHI6 824 aaKnown RBP14.89□□□□□ -0.03
COL6A1-201ENST00000361866 H7C0C1 242 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 CYP11B2P19099 503 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 ATP5OP48047 213 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 FMO5P49326 533 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 VAMP7P51809 220 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 SPARCL1Q14515 664 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 AOC3Q16853 763 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 ARHGEF16Q5VV41 709 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 SPATA21Q7Z572 469 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 TEX2Q8IWB9 1127 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 SEPT12Q8IYM1 358 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 NSMCE1Q8WV22 266 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 C18orf8Q96DM3 657 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 AGPAT1Q99943 283 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 SPATA31D1Q6ZQQ2 1576 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 COMTP21964 271 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 SLC20A2Q08357 652 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 CAPRIN2Q6IMN6 1127 aaKnown RBP14.89□□□□□ -0.03
COL6A1-201ENST00000361866 C3orf67Q6ZVT6 689 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 ZC3H18Q86VM9 953 aaKnown RBP14.89□□□□□ -0.03
COL6A1-201ENST00000361866 PYROXD1Q8WU10 500 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 JDP2Q8WYK2 163 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 CAVIN3Q969G5 261 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 JMJD4Q9H9V9 463 aa14.89□□□□□ -0.03
COL6A1-201ENST00000361866 PI4K2BG5E9Z4 385 aa14.88□□□□□ -0.03
COL6A1-201ENST00000361866 MT-ND3P03897 115 aa14.88□□□□□ -0.03
COL6A1-201ENST00000361866 ESRRAP11474 423 aaPredicted RBP14.88□□□□□ -0.03
COL6A1-201ENST00000361866 CDK17Q00537 523 aa14.88□□□□□ -0.03
COL6A1-201ENST00000361866 SF3B3Q15393 1217 aaKnown RBP14.88□□□□□ -0.03
COL6A1-201ENST00000361866 C4orf33Q8N1A6 199 aa14.88□□□□□ -0.03
COL6A1-201ENST00000361866 BTBD6Q96KE9 485 aa14.88□□□□□ -0.03
COL6A1-201ENST00000361866 ADAM22Q9P0K1 906 aa14.88□□□□□ -0.03
COL6A1-201ENST00000361866 USP15Q9Y4E8 981 aaPredicted RBP14.88□□□□□ -0.03
COL6A1-201ENST00000361866 KLRC4O43908 158 aa14.88□□□□□ -0.03
COL6A1-201ENST00000361866 MYCNP04198 464 aaPredicted RBP14.88□□□□□ -0.03
COL6A1-201ENST00000361866 PON1P27169 355 aa14.88□□□□□ -0.03
COL6A1-201ENST00000361866 DRP2Q13474 957 aa14.88□□□□□ -0.03
COL6A1-201ENST00000361866 DHX34Q14147 1143 aaKnown RBP14.88□□□□□ -0.03
COL6A1-201ENST00000361866 C2CD6Q53TS8 623 aa14.88□□□□□ -0.03
COL6A1-201ENST00000361866 MEI1Q5TIA1 1274 aa14.88□□□□□ -0.03
COL6A1-201ENST00000361866 NUDCD1Q96RS6 583 aa14.88□□□□□ -0.03
COL6A1-201ENST00000361866 TRIM4Q9C037 500 aa14.88□□□□□ -0.03
COL6A1-201ENST00000361866 VCPKMTQ9H867 229 aa14.88□□□□□ -0.03
COL6A1-201ENST00000361866 IGF2BP3O00425 579 aaKnown RBP eCLIP14.88□□□□□ -0.03
COL6A1-201ENST00000361866 RBBP5Q15291 538 aaKnown RBP14.88□□□□□ -0.03
COL6A1-201ENST00000361866 AGBL2Q5U5Z8 902 aa14.88□□□□□ -0.03
COL6A1-201ENST00000361866 CATSPER3Q86XQ3 398 aa14.88□□□□□ -0.03
COL6A1-201ENST00000361866 CALR3Q96L12 384 aaKnown RBP14.88□□□□□ -0.03
COL6A1-201ENST00000361866 NARFQ9UHQ1 456 aa14.88□□□□□ -0.03
COL6A1-201ENST00000361866 JCADQ9P266 1359 aa14.88□□□□□ -0.03
COL6A1-201ENST00000361866 CFAP69A5D8W1 941 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 PPIP5K2O43314 1243 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 SERPINB6P35237 376 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 HSPA9P38646 679 aaKnown RBP14.87□□□□□ -0.03
COL6A1-201ENST00000361866 FXR2P51116 673 aaKnown RBP eCLIP14.87□□□□□ -0.03
COL6A1-201ENST00000361866 GPSM2P81274 684 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 AP3B2Q13367 1082 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 SYCP2LQ5T4T6 812 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 LRP10Q7Z4F1 713 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 CCHCR1Q8TD31 782 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 SCFD1Q8WVM8 642 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 FAM20AQ96MK3 541 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 OSBPL1AQ9BXW6 950 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 STK33Q9BYT3 514 aa14.87□□□□□ -0.03
COL6A1-201ENST00000361866 DIS3Q9Y2L1 958 aaKnown RBP14.87□□□□□ -0.03
COL6A1-201ENST00000361866 L3MBTL1Q9Y468 752 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms