RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 MYH1P12882 1939 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 PNMA6FA0A0J9YX94 578 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 PVALEFA0A1B0GWK0 134 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 E9PMD0 336 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 GAS7O60861 476 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 SCTRP47872 440 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 TNNC1P63316 161 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 SNX1Q13596 522 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 ZKSCAN8Q15776 578 aaPredicted RBP9.83□□□□□ -0.84
TOP1-201ENST00000361337 PREPLQ4J6C6 727 aaPredicted RBP9.83□□□□□ -0.84
TOP1-201ENST00000361337 SNRNP48Q6IEG0 339 aaKnown RBP9.83□□□□□ -0.84
TOP1-201ENST00000361337 GJB7Q6PEY0 223 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 SPATS2Q86XZ4 545 aaKnown RBP9.83□□□□□ -0.84
TOP1-201ENST00000361337 MYOCDQ8IZQ8 938 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 LRRC57Q8N9N7 239 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 RBM46Q8TBY0 533 aaKnown RBP9.83□□□□□ -0.84
TOP1-201ENST00000361337 GANQ9H2C0 597 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 RNF14Q9UBS8 474 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 PRR12Q9ULL5 1215 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 SHBGP04278 402 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 FKBP3Q00688 224 aaKnown RBP9.83□□□□□ -0.84
TOP1-201ENST00000361337 ADCY1Q08828 1119 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 PARP9Q8IXQ6 854 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 ABTB1Q969K4 478 aaPredicted RBP9.83□□□□□ -0.84
TOP1-201ENST00000361337 IQCDQ96DY2 449 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.83□□□□□ -0.84
TOP1-201ENST00000361337 A0A1W2PRG0 241 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 TBCAO75347 108 aaKnown RBP9.83□□□□□ -0.84
TOP1-201ENST00000361337 CASP5P51878 434 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 CAPRIN2Q6IMN6 1127 aaKnown RBP9.83□□□□□ -0.84
TOP1-201ENST00000361337 GALNT17Q6IS24 598 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 SH3BP5LQ7L8J4 393 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 IRF2BP2Q7Z5L9 587 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 CCDC25Q86WR0 208 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 TRIM59Q8IWR1 403 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 ANKS4BQ8N8V4 417 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 ATG4CQ96DT6 458 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 A1CFQ9NQ94 594 aaKnown RBP9.83□□□□□ -0.84
TOP1-201ENST00000361337 SUGT1Q9Y2Z0 365 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 IVNS1ABPQ9Y6Y0 642 aa9.83□□□□□ -0.84
TOP1-201ENST00000361337 H0Y3Z8 333 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 PPP1R2P41236 205 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 PPP2R2AP63151 447 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 ASIC2Q16515 512 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 DPY19L2P1Q6NXN4 242 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 CACNA2D3Q8IZS8 1091 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 TCHPQ9BT92 498 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 RRAGCQ9HB90 399 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 PANK4Q9NVE7 773 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 PNMA2Q9UL42 364 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 PAPPA2Q9BXP8 1791 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 KRIT1O00522 736 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 USP11P51784 963 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 DHX9Q08211 1270 aaKnown RBP9.82□□□□□ -0.84
TOP1-201ENST00000361337 CTTNQ14247 550 aaKnown RBP9.82□□□□□ -0.84
TOP1-201ENST00000361337 KRT71Q3SY84 523 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 ACCSLQ4AC99 568 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 FAM26FQ5R3K3 315 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 FAM47EQ6ZV65 393 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 TMC3Q7Z5M5 1100 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 LDHDQ86WU2 507 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 SCFD1Q8WVM8 642 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 TSG101Q99816 390 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 ANO3Q9BYT9 981 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 IKZF4Q9H2S9 585 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 CCDC169A6NNP5 214 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 IGBP1P78318 339 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 KCNH2Q12809 1159 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 CCDC63Q8NA47 563 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 AGBL3Q8NEM8 1001 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 CYP2W1Q8TAV3 490 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 HAS1Q92839 578 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 TATDN2Q93075 761 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 TRIM4Q9C037 500 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 EHMT1Q9H9B1 1298 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 AS3MTQ9HBK9 375 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 KCNK9Q9NPC2 374 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 STK17AQ9UEE5 414 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 ATP8A1Q9Y2Q0 1164 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 ANKRD31Q8N7Z5 1873 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 ABCB11O95342 1321 aa9.82□□□□□ -0.84
TOP1-201ENST00000361337 VIL1P09327 827 aaKnown RBP9.81□□□□□ -0.84
TOP1-201ENST00000361337 WLSQ5T9L3 541 aa9.81□□□□□ -0.84
TOP1-201ENST00000361337 LRIG3Q6UXM1 1119 aa9.81□□□□□ -0.84
TOP1-201ENST00000361337 C1orf131Q8NDD1 294 aaKnown RBP9.81□□□□□ -0.84
TOP1-201ENST00000361337 SGSM3Q96HU1 749 aa9.81□□□□□ -0.84
TOP1-201ENST00000361337 OSGEPQ9NPF4 335 aa9.81□□□□□ -0.84
TOP1-201ENST00000361337 AIPL1Q9NZN9 384 aa9.81□□□□□ -0.84
TOP1-201ENST00000361337 NAGPAQ9UK23 515 aa9.81□□□□□ -0.84
TOP1-201ENST00000361337 PCDHA2Q9Y5H9 948 aa9.81□□□□□ -0.84
TOP1-201ENST00000361337 BRCA1P38398 1863 aaKnown RBP9.81□□□□□ -0.84
TOP1-201ENST00000361337 PFDN1O60925 122 aa9.81□□□□□ -0.84
TOP1-201ENST00000361337 ENTPD3O75355 529 aa9.81□□□□□ -0.84
TOP1-201ENST00000361337 FGFR1OPO95684 399 aaKnown RBP9.81□□□□□ -0.84
TOP1-201ENST00000361337 DRD4P21917 467 aa9.81□□□□□ -0.84
TOP1-201ENST00000361337 MARK3P27448 753 aa9.81□□□□□ -0.84
TOP1-201ENST00000361337 CAP2P40123 477 aa9.81□□□□□ -0.84
TOP1-201ENST00000361337 FXR2P51116 673 aaKnown RBP eCLIP9.81□□□□□ -0.841e-6■■■□□ 19.2
TOP1-201ENST00000361337 TMEM119Q4V9L6 283 aa9.81□□□□□ -0.84
TOP1-201ENST00000361337 RASIP1Q5U651 963 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms